Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

G2C

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2sing1.36Å1.37Å
N1C6sing1.35Å1.36Å
N1HN1sing0.97Å1.00Å
C2N2sing1.37Å1.39Å
C2N3doub1.31Å1.36Å
N2HN2sing0.97Å1.00Å
N2HN2Asing0.97Å1.00Å
N3C4sing1.34Å1.35Å
C4C5doub1.40Å1.39ÅAromatic
C4N9sing1.37Å1.34ÅAromatic
C5C6sing1.41Å1.40Å
C5N7sing1.35Å1.34ÅAromatic
C6O6doub1.22Å1.25Å
N7C8doub1.30Å1.35ÅAromatic
C8N9sing1.36Å1.35ÅAromatic
C8H8sing1.08Å1.08Å
N9C1'sing1.47Å1.44Å
PAO1Adoub1.48Å1.48Å
PAO2Asing1.61Å1.51Å
PAO3Asing1.61Å1.52Å
PAO5'sing1.61Å1.52Å
PBO1Bdoub1.48Å1.48Å
PBO2Bsing1.61Å1.51Å
PBO3Asing1.61Å1.52Å
PBC3Bsing1.82Å1.73Å
PGO1Gsing1.61Å1.51Å
PGO2Gsing1.61Å1.51Å
PGC3Bsing1.82Å1.73Å
PGO3Gdoub1.48Å1.48Å
C1'C2'sing1.54Å1.55Å
C1'O4'sing1.44Å1.44Å
C1'H1'sing1.09Å1.10Å
CL1BC3Bsing1.80Å1.76Å
C2'C3'sing1.55Å1.54Å
C2'H2'sing1.09Å1.10Å
C2'H2'Asing1.09Å1.10Å
CL2BC3Bsing1.80Å1.76Å
C3'O3'sing1.43Å1.43Å
C3'C4'sing1.55Å1.54Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C4'O4'sing1.44Å1.44Å
C4'C5'sing1.53Å1.56Å
C4'H4'sing1.09Å1.10Å
C5'O5'sing1.43Å1.34Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
O1GH13sing0.97Å0.95Å
O2AH14sing0.97Å0.95Å
O2BH15sing0.97Å0.95Å
O2GH16sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C6121.6°120.4°
C2N1HN1119.2°119.8°
N1C2N2120.2°119.1°
N1C2N3120.8°121.9°
C6N1HN1119.2°119.8°
N1C6C5118.1°118.3°
N1C6O6120.4°120.8°
N2C2N3119.1°119.0°
C2N2HN2120.0°120.0°
C2N2HN2A120.0°120.0°
C2N3C4119.2°121.1°
HN2N2HN2A120.0°120.0°
N3C4C5121.3°119.7°
N3C4N9130.6°134.2°
C5C4N9108.1°106.1°
C4C5C6119.0°118.6°
C4C5N7109.1°107.3°
C4N9C8105.1°107.5°
C4N9C1'127.1°126.3°
C6C5N7131.9°134.2°
C5C6O6121.5°120.8°
C5N7C8104.8°109.4°
N7C8N9112.9°109.8°
N7C8H8123.6°125.1°
N9C8H8123.6°125.1°
C8N9C1'127.8°126.2°
N9C1'C2'113.2°109.8°
N9C1'O4'113.1°109.9°
N9C1'H1'103.5°109.9°
O1APAO2A109.6°109.5°
O1APAO3A109.6°109.5°
O1APAO5'110.5°109.4°
O2APAO3A107.9°109.4°
O2APAO5'108.8°109.5°
PAO2AH14109.5°114.0°
O3APAO5'110.4°109.5°
PAO3APB126.7°134.0°
PAO5'C5'126.6°123.0°
O1BPBO2B109.9°109.4°
O1BPBO3A109.2°109.5°
O1BPBC3B110.2°109.5°
O2BPBO3A109.6°109.5°
O2BPBC3B108.5°109.4°
PBO2BH15109.5°114.0°
O3APBC3B109.5°109.5°
PBC3BPG112.4°109.5°
PBC3BCL1B109.9°109.4°
PBC3BCL2B109.0°109.5°
O1GPGO2G108.4°109.5°
O1GPGC3B109.8°109.5°
O1GPGO3G109.1°109.4°
PGO1GH13109.5°114.0°
O2GPGC3B109.6°109.5°
O2GPGO3G109.5°109.5°
PGO2GH16109.5°114.0°
C3BPGO3G110.5°109.5°
PGC3BCL1B109.1°109.5°
PGC3BCL2B109.6°109.5°
C2'C1'O4'107.3°107.3°
C2'C1'H1'109.8°109.9°
C1'C2'C3'104.2°104.2°
C1'C2'H2'111.3°110.4°
C1'C2'H2'A111.3°110.5°
O4'C1'H1'109.9°110.1°
C1'O4'C4'109.6°107.0°
CL1BC3BCL2B106.7°109.4°
C3'C2'H2'111.3°110.5°
C3'C2'H2'A111.3°110.5°
C2'C3'O3'110.8°110.9°
C2'C3'C4'102.5°102.1°
C2'C3'H3'113.6°110.9°
H2'C2'H2'A107.5°110.6°
O3'C3'C4'111.0°110.9°
O3'C3'H3'105.6°110.8°
C3'O3'HO3'109.5°114.0°
C4'C3'H3'113.5°111.0°
C3'C4'O4'105.1°103.5°
C3'C4'C5'114.8°110.6°
C3'C4'H4'109.4°110.7°
O4'C4'C5'110.9°110.6°
O4'C4'H4'113.4°110.6°
C5'C4'H4'103.5°110.7°
C4'C5'O5'110.0°109.5°
C4'C5'H5'109.3°109.5°
C4'C5'H5'A109.3°109.5°
O5'C5'H5'109.3°109.5°
O5'C5'H5'A109.3°109.4°
H5'C5'H5'A109.7°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2N1C6HN1180.0°179.7°
N1C2N2N3179.7°180.0°
N1C2N2HN2179.7°0.1°
N1C2N2HN2A0.3°180.0°
N1C2N3C40.0°0.0°
C2N1C6C50.7°0.0°
C2N1C6O6179.3°180.0°
C6N1C2N2179.0°180.0°
C6N1C2N30.7°0.0°
N1C6C5C40.1°0.0°
N1C6C5O6180.0°179.9°
N1C6C5N7179.9°180.0°
HN1N1C2N21.0°0.3°
HN1N1C2N3179.3°179.7°
HN1N1C6C5179.3°179.7°
HN1N1C6O60.7°0.2°
C2N2HN2HN2A180.0°179.9°
N2C2N3C4179.7°180.0°
N3C2N2HN20.0°179.9°
N3C2N2HN2A180.0°0.0°
C2N3C4C50.6°0.0°
C2N3C4N9179.3°180.0°
N3C4C5N9179.9°180.0°
N3C4C5C60.6°0.0°
N3C4C5N7179.4°180.0°
N3C4N9C8179.3°180.0°
N3C4N9C1'0.6°0.0°
C4C5C6N7180.0°180.0°
C4C5C6O6179.9°179.9°
C4C5N7C80.2°0.1°
C5C4N9C80.8°0.0°
C5C4N9C1'179.3°179.9°
N9C4C5C6179.3°180.0°
N9C4C5N70.7°0.0°
C4N9C8N70.7°0.0°
C4N9C8C1'179.8°179.9°
C4N9C8H8179.3°180.0°
C4N9C1'C2'62.9°85.0°
C4N9C1'O4'174.9°157.2°
C4N9C1'H1'56.0°35.9°
C6C5N7C8179.7°180.0°
N7C5C6O60.1°0.0°
C5N7C8N90.3°0.1°
C5N7C8H8179.7°180.0°
N7C8N9H8180.0°180.0°
N7C8N9C1'179.5°180.0°
C8N9C1'C2'117.3°95.0°
C8N9C1'O4'4.9°22.8°
C8N9C1'H1'123.8°144.0°
H8C8N9C1'0.6°0.1°
N9C1'C2'O4'125.4°119.4°
N9C1'C2'H1'115.2°121.0°
N9C1'O4'H1'115.2°121.1°
N9C1'C2'C3'135.6°121.5°
N9C1'C2'H2'104.4°119.9°
N9C1'C2'H2'A15.5°2.8°
N9C1'O4'C4'113.5°145.9°
O1APAO2AO3A119.3°120.0°
O1APAO2AO5'120.9°120.0°
O1APAO3AO5'121.9°120.0°
O1APAO3APB74.7°40.0°
O1APAO5'C5'53.1°55.0°
O1APAO2AH140.0°180.0°
O2APAO3AO5'118.8°120.0°
O2APAO3APB166.0°80.0°
O2APAO5'C5'67.3°65.0°
PAO3APBO1B67.5°60.0°
PAO3APBO2B52.9°60.0°
PAO3APBC3B171.8°180.0°
O3APAO5'C5'174.5°175.0°
O3APAO2AH14119.3°60.0°
O5'PAO3APB47.2°159.9°
PAO5'C5'C4'174.8°180.0°
PAO5'C5'H5'65.2°59.9°
PAO5'C5'H5'A54.8°60.1°
O5'PAO2AH14120.9°60.0°
O1BPBO2BO3A120.0°120.0°
O1BPBO2BC3B120.5°120.0°
O1BPBO3AC3B120.7°120.0°
O1BPBC3BPG51.3°59.9°
O1BPBC3BCL1B70.4°60.0°
O1BPBC3BCL2B173.0°180.0°
O1BPBO2BH150.0°180.0°
O2BPBO3AC3B118.9°120.0°
O2BPBC3BPG69.0°60.0°
O2BPBC3BCL1B169.3°180.0°
O2BPBC3BCL2B52.7°60.0°
O3APBC3BPG171.4°180.0°
O3APBC3BCL1B49.7°60.0°
O3APBC3BCL2B66.9°59.9°
O3APBO2BH15120.0°60.0°
PBC3BPGO1G174.0°180.0°
PBC3BPGO2G67.1°60.0°
PBC3BPGCL1B122.2°120.0°
PBC3BPGCL2B121.3°120.1°
PBC3BPGO3G53.7°60.0°
PBC3BCL1BCL2B118.0°120.0°
C3BPBO2BH15120.5°60.0°
O1GPGO2GC3B119.8°120.0°
O1GPGO2GO3G118.8°120.0°
O1GPGC3BO3G120.3°120.0°
O1GPGC3BCL1B63.8°60.0°
O1GPGC3BCL2B52.7°60.0°
O1GPGO2GH16118.8°60.0°
O2GPGC3BO3G120.7°120.0°
O2GPGC3BCL1B55.1°180.0°
O2GPGC3BCL2B171.6°60.0°
O2GPGO1GH13119.1°60.0°
PGC3BCL1BCL2B118.3°120.0°
C3BPGO1GH13121.2°180.0°
C3BPGO2GH16121.4°60.0°
O3GPGC3BCL1B175.9°60.0°
O3GPGC3BCL2B67.6°179.9°
O3GPGO1GH130.0°60.0°
O3GPGO2GH160.0°180.0°
C2'C1'O4'H1'119.4°119.5°
C1'C2'C3'H2'120.0°118.6°
C1'C2'C3'H2'A120.0°118.7°
C1'C2'H2'H2'A122.1°122.6°
C1'C2'C3'O3'92.2°139.1°
C1'C2'C3'C4'26.2°20.9°
C1'C2'C3'H3'149.1°97.4°
C2'C1'O4'C4'11.9°26.6°
O4'C1'C2'C3'10.1°2.1°
O4'C1'C2'H2'130.1°120.7°
O4'C1'C2'H2'A109.9°116.6°
C1'O4'C4'C3'29.1°40.1°
C1'O4'C4'C5'95.5°158.6°
C1'O4'C4'H4'148.6°78.4°
H1'C1'C2'C3'109.3°117.6°
H1'C1'C2'H2'10.7°1.1°
H1'C1'C2'H2'A130.7°123.8°
H1'C1'O4'C4'131.3°92.9°
C3'C2'H2'H2'A122.1°122.7°
C2'C3'O3'C4'113.2°112.7°
C2'C3'O3'H3'123.5°123.6°
C2'C3'C4'H3'123.0°118.2°
C2'C3'O3'HO3'180.0°61.5°
C2'C3'C4'O4'34.1°37.1°
C2'C3'C4'C5'88.0°155.5°
C2'C3'C4'H4'156.2°81.5°
H2'C2'C3'O3'27.8°20.5°
H2'C2'C3'C4'146.3°97.7°
H2'C2'C3'H3'90.9°144.0°
H2'AC2'C3'O3'147.8°102.2°
H2'AC2'C3'C4'93.8°139.6°
H2'AC2'C3'H3'29.0°21.3°
O3'C3'C4'H3'118.7°123.6°
O3'C3'C4'O4'84.2°155.2°
O3'C3'C4'C5'153.7°86.3°
O3'C3'C4'H4'37.9°36.7°
C4'C3'O3'HO3'66.8°174.1°
C3'C4'O4'C5'124.6°118.5°
C3'C4'O4'H4'119.5°118.5°
C3'C4'C5'H4'119.2°123.0°
C3'C4'C5'O5'174.1°175.1°
C3'C4'C5'H5'65.9°55.0°
C3'C4'C5'H5'A54.1°65.0°
H3'C3'O3'HO3'56.5°62.1°
H3'C3'C4'O4'157.0°81.1°
H3'C3'C4'C5'34.9°37.3°
H3'C3'C4'H4'80.8°160.3°
O4'C4'C5'H4'121.9°123.0°
O4'C4'C5'O5'55.2°70.9°
O4'C4'C5'H5'175.2°169.0°
O4'C4'C5'H5'A64.8°49.0°
C4'C5'O5'H5'120.0°120.0°
C4'C5'O5'H5'A120.0°119.9°
C4'C5'H5'H5'A119.8°120.0°
H4'C4'C5'O5'66.8°52.1°
H4'C4'C5'H5'53.2°68.0°
H4'C4'C5'H5'A173.3°172.0°
O5'C5'H5'H5'A119.8°120.0°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon