FZT
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
OG | CB | sing | 1.43Å | 1.42Å | |
CB | CA | sing | 1.53Å | 1.53Å | |
N | CA | sing | 1.47Å | 1.47Å | |
CA | C | sing | 1.51Å | 1.52Å | |
C | O | doub | 1.21Å | 1.23Å | |
C | N3S | sing | 1.35Å | 1.42Å | |
C5' | C4' | sing | 1.53Å | 1.51Å | |
C5' | O5' | sing | 1.43Å | 1.47Å | |
N3S | S | sing | 1.66Å | 1.59Å | |
C4' | O4' | sing | 1.44Å | 1.44Å | |
C4' | C3' | sing | 1.54Å | 1.52Å | |
O3' | C3' | sing | 1.43Å | 1.42Å | |
O5' | S | sing | 1.52Å | 1.60Å | |
O4' | C1' | sing | 1.44Å | 1.41Å | |
O2' | C2' | sing | 1.43Å | 1.42Å | |
C3' | C2' | sing | 1.55Å | 1.53Å | |
S | O2S | doub | 1.42Å | 1.42Å | |
S | O1S | doub | 1.42Å | 1.42Å | |
C1' | C2' | sing | 1.55Å | 1.54Å | |
C1' | N1 | sing | 1.47Å | 1.48Å | |
O2 | C2 | doub | 1.22Å | 1.22Å | |
N1 | C2 | sing | 1.34Å | 1.38Å | |
N1 | C6 | sing | 1.37Å | 1.39Å | |
C2 | N3 | sing | 1.35Å | 1.40Å | |
C6 | C5 | doub | 1.35Å | 1.35Å | |
N3 | C3U | sing | 1.46Å | 1.47Å | |
N3 | C4 | sing | 1.35Å | 1.40Å | |
C5 | C4 | sing | 1.42Å | 1.44Å | |
C4 | O4 | doub | 1.22Å | 1.23Å | |
C3U | H1 | sing | 1.09Å | 1.10Å | |
C3U | H2 | sing | 1.09Å | 1.10Å | |
C3U | H3 | sing | 1.09Å | 1.10Å | |
C5 | H4 | sing | 1.08Å | 1.08Å | |
C6 | H5 | sing | 1.08Å | 1.08Å | |
C1' | H6 | sing | 1.09Å | 1.10Å | |
C4' | H7 | sing | 1.09Å | 1.10Å | |
C5' | H8 | sing | 1.09Å | 1.10Å | |
C5' | H9 | sing | 1.09Å | 1.10Å | |
N3S | H10 | sing | 0.97Å | 1.00Å | |
CA | H11 | sing | 1.09Å | 1.10Å | |
N | H12 | sing | 1.01Å | 1.00Å | |
N | H13 | sing | 1.01Å | 1.00Å | |
CB | H15 | sing | 1.09Å | 1.10Å | |
CB | H16 | sing | 1.09Å | 1.10Å | |
OG | H17 | sing | 0.97Å | 0.95Å | |
C3' | H18 | sing | 1.09Å | 1.10Å | |
O3' | H19 | sing | 0.97Å | 0.95Å | |
C2' | H20 | sing | 1.09Å | 1.10Å | |
O2' | H21 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
OG | CB | CA | 111.7° | 109.4° |
OG | CB | H15 | 108.9° | 109.5° |
OG | CB | H16 | 108.9° | 109.5° |
CB | OG | H17 | 109.5° | 114.0° |
CB | CA | N | 111.7° | 109.4° |
CB | CA | C | 109.5° | 109.5° |
CB | CA | H11 | 107.6° | 109.5° |
CA | CB | H15 | 108.9° | 109.5° |
CA | CB | H16 | 108.9° | 109.4° |
N | CA | C | 111.8° | 109.5° |
N | CA | H11 | 108.4° | 109.5° |
CA | N | H12 | 109.5° | 111.0° |
CA | N | H13 | 109.5° | 111.0° |
CA | C | O | 123.2° | 120.0° |
CA | C | N3S | 117.2° | 120.0° |
C | CA | H11 | 107.8° | 109.5° |
O | C | N3S | 119.6° | 120.0° |
C | N3S | S | 124.9° | 120.0° |
C | N3S | H10 | 117.5° | 120.0° |
C4' | C5' | O5' | 107.9° | 109.4° |
C5' | C4' | O4' | 110.2° | 109.9° |
C5' | C4' | C3' | 115.8° | 109.9° |
C5' | C4' | H7 | 108.9° | 110.0° |
C4' | C5' | H8 | 109.9° | 109.4° |
C4' | C5' | H9 | 109.8° | 109.4° |
C5' | O5' | S | 119.1° | 114.0° |
O5' | C5' | H8 | 109.9° | 109.5° |
O5' | C5' | H9 | 109.9° | 109.5° |
N3S | S | O5' | 105.1° | 107.3° |
N3S | S | O2S | 107.9° | 106.4° |
N3S | S | O1S | 108.7° | 106.4° |
S | N3S | H10 | 117.5° | 120.0° |
O4' | C4' | C3' | 103.1° | 107.3° |
C4' | O4' | C1' | 107.1° | 106.9° |
O4' | C4' | H7 | 109.9° | 109.8° |
C4' | C3' | O3' | 109.8° | 110.5° |
C4' | C3' | C2' | 102.8° | 104.2° |
C3' | C4' | H7 | 108.8° | 109.9° |
C4' | C3' | H18 | 110.1° | 110.5° |
O3' | C3' | C2' | 112.2° | 110.5° |
O3' | C3' | H18 | 111.6° | 110.5° |
C3' | O3' | H19 | 109.5° | 114.0° |
O5' | S | O2S | 107.5° | 106.4° |
O5' | S | O1S | 105.4° | 106.4° |
O4' | C1' | C2' | 107.6° | 103.5° |
O4' | C1' | N1 | 108.9° | 110.6° |
O4' | C1' | H6 | 108.8° | 110.7° |
O2' | C2' | C3' | 108.7° | 110.9° |
O2' | C2' | C1' | 110.4° | 110.9° |
O2' | C2' | H20 | 112.6° | 110.8° |
C2' | O2' | H21 | 109.5° | 114.1° |
C3' | C2' | C1' | 103.0° | 102.1° |
C2' | C3' | H18 | 109.9° | 110.5° |
C3' | C2' | H20 | 111.0° | 110.9° |
O2S | S | O1S | 121.2° | 123.1° |
C2' | C1' | N1 | 116.4° | 110.6° |
C2' | C1' | H6 | 107.1° | 110.6° |
C1' | C2' | H20 | 110.8° | 110.9° |
C1' | N1 | C2 | 116.4° | 119.7° |
C1' | N1 | C6 | 121.4° | 119.7° |
N1 | C1' | H6 | 107.9° | 110.6° |
O2 | C2 | N1 | 123.1° | 119.5° |
O2 | C2 | N3 | 121.1° | 119.5° |
C2 | N1 | C6 | 122.2° | 120.6° |
N1 | C2 | N3 | 115.8° | 120.9° |
N1 | C6 | C5 | 121.2° | 119.7° |
N1 | C6 | H5 | 119.4° | 120.2° |
C2 | N3 | C3U | 117.5° | 119.9° |
C2 | N3 | C4 | 124.5° | 120.3° |
C6 | C5 | C4 | 120.5° | 119.1° |
C6 | C5 | H4 | 119.7° | 120.4° |
C5 | C6 | H5 | 119.4° | 120.2° |
C3U | N3 | C4 | 117.9° | 119.9° |
N3 | C3U | H1 | 109.5° | 109.5° |
N3 | C3U | H2 | 109.4° | 109.5° |
N3 | C3U | H3 | 109.5° | 109.5° |
N3 | C4 | C5 | 115.7° | 119.4° |
N3 | C4 | O4 | 119.4° | 120.3° |
C5 | C4 | O4 | 124.9° | 120.3° |
C4 | C5 | H4 | 119.7° | 120.4° |
H1 | C3U | H2 | 109.5° | 109.5° |
H1 | C3U | H3 | 109.5° | 109.4° |
H2 | C3U | H3 | 109.5° | 109.5° |
H8 | C5' | H9 | 109.5° | 109.6° |
H12 | N | H13 | 109.5° | 111.0° |
H15 | CB | H16 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
OG | CB | CA | H15 | 120.3° | 120.0° |
OG | CB | CA | H16 | 120.3° | 120.0° |
OG | CB | CA | N | 70.2° | 65.0° |
OG | CB | CA | C | 54.1° | 175.0° |
OG | CB | CA | H11 | 171.0° | 55.0° |
OG | CB | H15 | H16 | 119.0° | 120.0° |
CB | CA | N | C | 123.0° | 120.0° |
CB | CA | N | H11 | 118.3° | 120.0° |
CB | CA | C | H11 | 116.8° | 120.0° |
CB | CA | C | O | 118.5° | 99.9° |
CB | CA | C | N3S | 62.4° | 80.0° |
CB | CA | N | H12 | 180.0° | 60.0° |
CB | CA | N | H13 | 60.0° | 63.9° |
CA | CB | H15 | H16 | 119.0° | 120.0° |
CA | CB | OG | H17 | 180.0° | 179.9° |
N | CA | C | H11 | 119.0° | 120.0° |
N | CA | C | O | 5.8° | 20.0° |
N | CA | C | N3S | 173.3° | 160.0° |
CA | N | H12 | H13 | 120.0° | 124.0° |
N | CA | CB | H15 | 50.2° | 55.0° |
N | CA | CB | H16 | 169.5° | 175.0° |
CA | C | O | N3S | 179.1° | 180.0° |
CA | C | N3S | S | 177.1° | 180.0° |
CA | C | N3S | H10 | 2.9° | 0.0° |
C | CA | N | H12 | 57.0° | 60.0° |
C | CA | N | H13 | 63.0° | 176.1° |
C | CA | CB | H15 | 174.5° | 65.0° |
C | CA | CB | H16 | 66.2° | 55.0° |
O | C | N3S | S | 3.8° | 0.0° |
O | C | N3S | H10 | 176.3° | 180.0° |
O | C | CA | H11 | 124.8° | 140.0° |
C | N3S | S | H10 | 180.0° | 180.0° |
C | N3S | S | O5' | 53.8° | 65.0° |
C | N3S | S | O2S | 168.3° | 178.5° |
C | N3S | S | O1S | 58.7° | 48.6° |
N3S | C | CA | H11 | 54.4° | 40.0° |
C4' | C5' | O5' | H8 | 119.8° | 119.9° |
C4' | C5' | O5' | H9 | 119.7° | 120.0° |
C5' | C4' | O4' | C3' | 124.2° | 119.5° |
C5' | C4' | O4' | H7 | 120.0° | 121.1° |
C5' | C4' | C3' | H7 | 123.0° | 121.2° |
C5' | C4' | C3' | O3' | 81.7° | 119.8° |
C4' | C5' | O5' | S | 122.5° | 180.0° |
C5' | C4' | O4' | C1' | 164.3° | 145.9° |
C5' | C4' | C3' | C2' | 158.6° | 121.4° |
C4' | C5' | H8 | H9 | 120.7° | 120.0° |
C5' | C4' | C3' | H18 | 41.5° | 2.8° |
C5' | O5' | S | N3S | 50.1° | 75.0° |
O5' | C5' | C4' | O4' | 58.9° | 66.4° |
O5' | C5' | C4' | C3' | 57.6° | 175.7° |
C5' | O5' | S | O2S | 64.7° | 38.6° |
C5' | O5' | S | O1S | 164.9° | 171.5° |
O5' | C5' | C4' | H7 | 179.5° | 54.6° |
O5' | C5' | H8 | H9 | 120.7° | 120.1° |
N3S | S | O5' | O2S | 114.7° | 113.6° |
N3S | S | O5' | O1S | 114.8° | 113.6° |
N3S | S | O2S | O1S | 126.0° | 122.9° |
O4' | C4' | C3' | H7 | 116.6° | 119.4° |
O4' | C4' | C3' | O3' | 157.9° | 120.7° |
O4' | C4' | C3' | C2' | 38.2° | 2.0° |
C4' | O4' | C1' | C2' | 25.4° | 40.0° |
C4' | O4' | C1' | N1 | 152.4° | 158.5° |
C4' | O4' | C1' | H6 | 90.3° | 78.5° |
O4' | C4' | C5' | H8 | 60.8° | 173.6° |
O4' | C4' | C5' | H9 | 178.7° | 53.5° |
O4' | C4' | C3' | H18 | 78.9° | 116.7° |
C4' | C3' | O3' | C2' | 113.7° | 114.8° |
C4' | C3' | O3' | H18 | 122.4° | 122.6° |
C3' | C4' | O4' | C1' | 40.1° | 26.5° |
C4' | C3' | C2' | O2' | 94.5° | 139.1° |
C4' | C3' | C2' | H18 | 117.2° | 118.7° |
C4' | C3' | C2' | C1' | 22.6° | 20.9° |
C3' | C4' | C5' | H8 | 177.4° | 55.7° |
C3' | C4' | C5' | H9 | 62.2° | 64.3° |
C4' | C3' | O3' | H19 | 180.0° | 180.0° |
C4' | C3' | C2' | H20 | 141.2° | 97.3° |
O3' | C3' | C2' | O2' | 23.5° | 20.4° |
O3' | C3' | C2' | H18 | 124.8° | 122.6° |
O3' | C3' | C2' | C1' | 140.6° | 97.8° |
O3' | C3' | C4' | H7 | 41.2° | 1.3° |
O3' | C3' | C2' | H20 | 100.8° | 144.0° |
O5' | S | O2S | O1S | 121.1° | 122.9° |
S | O5' | C5' | H8 | 117.7° | 60.1° |
S | O5' | C5' | H9 | 2.7° | 60.0° |
O5' | S | N3S | H10 | 126.2° | 115.0° |
O4' | C1' | C2' | O2' | 116.3° | 155.2° |
O4' | C1' | C2' | C3' | 0.5° | 37.0° |
O4' | C1' | C2' | N1 | 122.4° | 118.5° |
O4' | C1' | C2' | H6 | 116.8° | 118.6° |
O4' | C1' | N1 | H6 | 117.9° | 123.0° |
O4' | C1' | N1 | C2 | 119.6° | 130.9° |
O4' | C1' | N1 | C6 | 61.6° | 48.5° |
C1' | O4' | C4' | H7 | 75.8° | 92.9° |
O4' | C1' | C2' | H20 | 118.2° | 81.2° |
O2' | C2' | C3' | C1' | 117.1° | 118.2° |
O2' | C2' | C3' | H20 | 124.3° | 123.6° |
O2' | C2' | C1' | H20 | 125.5° | 123.6° |
O2' | C2' | C1' | N1 | 121.3° | 86.3° |
O2' | C2' | C1' | H6 | 0.5° | 36.6° |
O2' | C2' | C3' | H18 | 148.3° | 102.2° |
C3' | C2' | C1' | H20 | 118.7° | 118.2° |
C3' | C2' | C1' | N1 | 122.9° | 155.5° |
C3' | C2' | C1' | H6 | 116.3° | 81.6° |
C2' | C3' | C4' | H7 | 78.4° | 117.4° |
C2' | C3' | O3' | H19 | 66.3° | 65.2° |
C3' | C2' | O2' | H21 | 180.0° | 67.2° |
O2S | S | N3S | H10 | 11.7° | 1.4° |
O1S | S | N3S | H10 | 121.3° | 131.5° |
C2' | C1' | N1 | H6 | 120.4° | 122.9° |
C2' | C1' | N1 | C2 | 118.7° | 115.0° |
C2' | C1' | N1 | C6 | 60.1° | 65.6° |
C1' | C2' | C3' | H18 | 94.6° | 139.6° |
C1' | C2' | O2' | H21 | 67.8° | 180.0° |
C1' | N1 | C2 | O2 | 4.1° | 0.5° |
C1' | N1 | C2 | C6 | 178.8° | 179.4° |
C1' | N1 | C2 | N3 | 177.5° | 180.0° |
C1' | N1 | C6 | C5 | 177.3° | 179.7° |
C1' | N1 | C6 | H5 | 2.7° | 0.3° |
N1 | C1' | C2' | H20 | 4.2° | 37.3° |
O2 | C2 | N1 | N3 | 178.3° | 179.5° |
O2 | C2 | N1 | C6 | 177.0° | 179.9° |
O2 | C2 | N3 | C3U | 1.6° | 0.2° |
O2 | C2 | N3 | C4 | 178.4° | 179.9° |
C2 | N1 | C6 | C5 | 1.4° | 0.3° |
N1 | C2 | N3 | C3U | 176.8° | 179.8° |
N1 | C2 | N3 | C4 | 0.0° | 0.5° |
C2 | N1 | C6 | H5 | 178.6° | 179.8° |
C2 | N1 | C1' | H6 | 1.7° | 7.9° |
C6 | N1 | C2 | N3 | 1.3° | 0.5° |
N1 | C6 | C5 | H5 | 180.0° | 180.0° |
N1 | C6 | C5 | C4 | 0.1° | 0.0° |
N1 | C6 | C5 | H4 | 179.9° | 179.9° |
C6 | N1 | C1' | H6 | 179.5° | 171.6° |
C2 | N3 | C3U | C4 | 177.0° | 179.7° |
C2 | N3 | C4 | C5 | 1.2° | 0.3° |
C2 | N3 | C4 | O4 | 178.2° | 179.7° |
C2 | N3 | C3U | H1 | 180.0° | 179.7° |
C2 | N3 | C3U | H2 | 60.0° | 60.2° |
C2 | N3 | C3U | H3 | 60.0° | 59.8° |
C6 | C5 | C4 | N3 | 1.1° | 0.0° |
C6 | C5 | C4 | H4 | 180.0° | 180.0° |
C6 | C5 | C4 | O4 | 178.3° | 180.0° |
C3U | N3 | C4 | C5 | 175.6° | 180.0° |
C3U | N3 | C4 | O4 | 5.0° | 0.0° |
N3 | C3U | H1 | H2 | 120.0° | 120.0° |
N3 | C3U | H1 | H3 | 120.0° | 120.0° |
N3 | C3U | H2 | H3 | 120.0° | 120.0° |
N3 | C4 | C5 | O4 | 179.4° | 180.0° |
C4 | N3 | C3U | H1 | 3.0° | 0.0° |
C4 | N3 | C3U | H2 | 123.0° | 120.0° |
C4 | N3 | C3U | H3 | 117.0° | 120.0° |
N3 | C4 | C5 | H4 | 178.9° | 179.9° |
C4 | C5 | C6 | H5 | 179.9° | 180.0° |
O4 | C4 | C5 | H4 | 1.7° | 0.0° |
H1 | C3U | H2 | H3 | 120.0° | 119.9° |
H4 | C5 | C6 | H5 | 0.1° | 0.0° |
H6 | C1' | C2' | H20 | 125.0° | 160.2° |
H7 | C4' | C5' | H8 | 59.8° | 65.4° |
H7 | C4' | C5' | H9 | 60.7° | 174.6° |
H7 | C4' | C3' | H18 | 164.5° | 124.0° |
H11 | CA | N | H12 | 61.7° | 180.0° |
H11 | CA | N | H13 | 178.3° | 56.1° |
H11 | CA | CB | H15 | 68.6° | 175.0° |
H11 | CA | CB | H16 | 50.7° | 65.0° |
H15 | CB | OG | H17 | 59.6° | 60.0° |
H16 | CB | OG | H17 | 59.7° | 60.0° |
H18 | C3' | O3' | H19 | 57.7° | 57.4° |
H18 | C3' | C2' | H20 | 24.0° | 21.4° |
H20 | C2' | O2' | H21 | 56.7° | 56.4° |