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FYA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CCAsing1.53Å1.55Å
CO3Psing1.43Å1.27Å
CH1sing1.09Å1.12Å
CH2Asing1.09Å1.12Å
CANsing1.47Å1.50Å
CACBsing1.53Å1.53Å
CAHAsing1.09Å1.11Å
NHN1sing1.01Å1.02Å
NHN2sing1.01Å1.02Å
CBCGsing1.51Å1.51Å
CBHB1sing1.09Å1.12Å
CBHB2sing1.09Å1.12Å
CGCD1doub1.38Å1.39ÅAromatic
CGCD2sing1.38Å1.39ÅAromatic
CD1CE1sing1.38Å1.40ÅAromatic
CD1HD1sing1.08Å1.10Å
CD2CE2doub1.38Å1.40ÅAromatic
CD2HD2sing1.08Å1.10Å
CE1CZdoub1.38Å1.38ÅAromatic
CE1HE1sing1.08Å1.10Å
CE2CZsing1.38Å1.40ÅAromatic
CE2HE2sing1.08Å1.10Å
CZHZsing1.08Å1.10Å
PO1Pdoub1.48Å1.48Å
PO2Psing1.61Å1.47Å
PO3Psing1.61Å1.65Å
PO5'sing1.61Å1.62Å
O2PHOP2sing0.97Å0.95Å
O5'C5'sing1.43Å1.43Å
C5'C4'sing1.53Å1.54Å
C5'H5'1sing1.09Å1.11Å
C5'H5'2sing1.09Å1.11Å
C4'O4'sing1.44Å1.45Å
C4'C3'sing1.54Å1.51Å
C4'H4'sing1.09Å1.11Å
O4'C1'sing1.44Å1.44Å
C3'O3'sing1.43Å1.43Å
C3'C2'sing1.55Å1.51Å
C3'H3'sing1.09Å1.11Å
O3'HO'3sing0.97Å0.95Å
C2'O2'sing1.43Å1.44Å
C2'C1'sing1.55Å1.53Å
C2'H2'sing1.09Å1.11Å
O2'HO'2sing0.97Å0.95Å
C1'N9sing1.46Å1.48Å
C1'H1'sing1.09Å1.12Å
N9C8sing1.36Å1.38ÅAromatic
N9C4sing1.37Å1.38ÅAromatic
C8N7doub1.30Å1.30ÅAromatic
C8H8sing1.08Å1.10Å
N7C5sing1.35Å1.39ÅAromatic
C5C6sing1.40Å1.40ÅAromatic
C5C4doub1.40Å1.37ÅAromatic
C6N6sing1.38Å1.33Å
C6N1doub1.33Å1.35ÅAromatic
N6H61sing0.97Å1.02Å
N6H62sing0.97Å1.02Å
N1C2sing1.32Å1.33ÅAromatic
C2N3doub1.32Å1.32ÅAromatic
C2H2sing1.08Å1.10Å
N3C4sing1.33Å1.35ÅAromatic
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CACO3P120.8°109.5°
CACH1108.2°109.4°
CACH2A108.2°109.4°
CCAN112.4°109.5°
CCACB111.4°109.5°
CCAHA105.9°109.5°
O3PCH1108.1°109.5°
O3PCH2A108.1°109.5°
CO3PP121.7°106.8°
H1CH2A101.8°109.5°
NCACB109.0°109.4°
NCAHA108.5°109.5°
CANHN1112.4°106.7°
CANHN2111.1°106.8°
CBCAHA109.5°109.4°
CACBCG113.5°109.5°
CACBHB1110.7°109.5°
CACBHB2110.8°109.5°
HN1NHN2111.1°106.6°
CGCBHB1110.8°109.4°
CGCBHB2110.8°109.5°
CBCGCD1120.8°120.0°
CBCGCD2120.7°120.0°
HB1CBHB299.5°109.5°
CD1CGCD2118.5°120.0°
CGCD1CE1121.2°120.0°
CGCD1HD1119.0°120.0°
CGCD2CE2120.8°120.0°
CGCD2HD2119.4°120.0°
CE1CD1HD1119.8°120.0°
CD1CE1CZ119.9°120.0°
CD1CE1HE1120.8°120.0°
CE2CD2HD2119.9°120.0°
CD2CE2CZ120.1°120.0°
CD2CE2HE2119.8°120.0°
CZCE1HE1119.3°120.0°
CE1CZCE2119.5°120.0°
CE1CZHZ119.7°120.0°
CZCE2HE2120.0°120.0°
CE2CZHZ120.9°120.0°
O1PPO2P119.6°109.5°
O1PPO3P108.7°109.5°
O1PPO5'108.4°109.5°
O2PPO3P108.4°109.5°
O2PPO5'107.4°109.5°
PO2PHOP2119.6°106.8°
O3PPO5'103.0°109.5°
PO5'C5'120.0°106.8°
O5'C5'C4'113.0°109.5°
O5'C5'H5'1110.9°109.4°
O5'C5'H5'2110.9°109.5°
C4'C5'H5'1110.9°109.4°
C4'C5'H5'2110.9°109.5°
C5'C4'O4'110.7°109.9°
C5'C4'C3'111.1°109.9°
C5'C4'H4'106.9°109.8°
H5'1C5'H5'299.5°109.5°
O4'C4'C3'107.4°107.5°
O4'C4'H4'110.5°109.8°
C4'O4'C1'109.6°106.9°
C3'C4'H4'110.2°109.9°
C4'C3'O3'111.5°110.8°
C4'C3'C2'105.2°104.0°
C4'C3'H3'111.9°110.5°
O4'C1'C2'107.9°103.5°
O4'C1'N9109.0°110.6°
O4'C1'H1'111.4°110.6°
O3'C3'C2'112.1°110.4°
O3'C3'H3'105.0°110.4°
C3'O3'HO'3111.5°106.8°
C2'C3'H3'111.3°110.5°
C3'C2'O2'111.0°110.9°
C3'C2'C1'105.1°102.1°
C3'C2'H2'111.7°110.9°
O2'C2'C1'110.4°110.9°
O2'C2'H2'106.5°110.8°
C2'O2'HO'2111.0°106.8°
C1'C2'H2'112.3°110.9°
C2'C1'N9111.0°110.7°
C2'C1'H1'109.4°110.6°
N9C1'H1'108.2°110.5°
C1'N9C8128.9°126.2°
C1'N9C4125.8°126.3°
C8N9C4105.3°107.4°
N9C8N7113.8°110.0°
N9C8H8125.5°125.0°
N9C4C5106.5°106.0°
N9C4N3126.3°134.9°
N7C8H8120.7°125.0°
C8N7C5104.1°109.4°
N7C5C6132.6°134.7°
N7C5C4110.4°107.1°
C6C5C4117.0°118.2°
C5C6N6123.2°120.8°
C5C6N1117.2°118.5°
C5C4N3127.2°119.0°
N6C6N1119.6°120.7°
C6N6H61123.2°120.0°
C6N6H62107.3°120.0°
C6N1C2119.1°121.2°
H61N6H62107.3°120.0°
N1C2N3129.3°122.4°
N1C2H2115.6°118.7°
N3C2H2115.1°118.8°
C2N3C4110.1°120.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CACO3PH1125.2°120.0°
CACO3PH2A125.3°120.0°
CACH1H2A113.8°120.0°
CCANCB124.0°120.0°
CCANHA116.8°120.0°
CCACBHA116.9°120.0°
CCANHN1180.0°60.1°
CCANHN254.7°173.8°
CCACBCG138.4°180.0°
CCACBHB196.3°60.0°
CCACBHB213.1°60.0°
CACO3PP162.0°180.0°
O3PCH1H2A113.7°120.0°
O3PCCAN125.6°60.0°
O3PCCACB3.0°180.0°
O3PCCAHA116.1°60.0°
CO3PPO1P35.0°60.0°
CO3PPO2P166.4°60.0°
CO3PPO5'79.9°180.0°
H1CCAN0.4°180.0°
H1CCACB122.3°60.0°
H1CCAHA118.7°60.0°
H1CO3PP36.7°60.0°
H2ACCAN109.2°60.0°
H2ACCACB128.2°59.9°
H2ACCAHA9.2°179.9°
H2ACO3PP72.7°60.0°
NCACBHA118.6°120.0°
CANHN1HN2125.3°113.8°
NCACBCG97.0°60.0°
NCACBHB128.3°60.0°
NCACBHB2137.6°180.0°
CBCANHN156.0°60.0°
CBCANHN269.3°53.8°
CACBCGHB1125.3°120.0°
CACBCGHB2125.3°120.0°
CACBHB1HB2116.6°120.0°
CACBCGCD1100.1°90.1°
CACBCGCD279.3°90.3°
HACANHN163.3°179.9°
HACANHN2171.5°66.2°
HACACBCG21.6°60.0°
HACACBHB1146.9°180.0°
HACACBHB2103.8°60.0°
CGCBHB1HB2116.6°120.0°
CBCGCD1CD2179.4°179.7°
CBCGCD1CE1179.4°180.0°
CBCGCD1HD10.6°0.1°
CBCGCD2CE2179.4°179.8°
CBCGCD2HD20.6°0.3°
HB1CBCGCD1134.6°30.0°
HB1CBCGCD245.9°149.7°
HB2CBCGCD125.2°149.9°
HB2CBCGCD2155.3°29.7°
CGCD1CE1HD1180.0°179.9°
CD1CGCD2CE20.1°0.6°
CD1CGCD2HD2179.9°179.9°
CGCD1CE1CZ0.0°0.1°
CGCD1CE1HE1180.0°179.9°
CD2CGCD1CE10.0°0.3°
CD2CGCD1HD1179.9°179.8°
CGCD2CE2HD2180.0°179.5°
CGCD2CE2CZ0.0°0.5°
CGCD2CE2HE2180.0°179.8°
CD1CE1CZHE1180.0°180.0°
CD1CE1CZCE20.0°0.1°
CD1CE1CZHZ180.0°180.0°
HD1CD1CE1CZ179.9°180.0°
HD1CD1CE1HE10.0°0.0°
CD2CE2CZCE10.0°0.3°
CD2CE2CZHE2180.0°179.7°
CD2CE2CZHZ180.0°179.8°
HD2CD2CE2CZ180.0°180.0°
HD2CD2CE2HE20.0°0.2°
CE1CZCE2HZ180.0°179.9°
CE1CZCE2HE2180.0°180.0°
HE1CE1CZCE2179.9°180.0°
HE1CE1CZHZ0.0°0.0°
HE2CE2CZHZ0.0°0.1°
O1PPO2PO3P125.3°120.0°
O1PPO2PO5'124.0°120.0°
O1PPO3PO5'114.9°120.0°
O1PPO2PHOP2179.9°180.0°
O1PPO5'C5'154.4°60.0°
O2PPO3PO5'113.6°120.0°
O2PPO5'C5'75.0°60.0°
O3PPO2PHOP254.8°60.1°
O3PPO5'C5'39.3°180.0°
O5'PO2PHOP255.9°60.0°
PO5'C5'C4'120.0°180.0°
PO5'C5'H5'15.2°60.0°
PO5'C5'H5'2114.8°59.9°
O5'C5'C4'H5'1125.2°119.9°
O5'C5'C4'H5'2125.3°120.1°
O5'C5'H5'1H5'2116.8°120.0°
O5'C5'C4'O4'64.0°61.6°
O5'C5'C4'C3'55.3°179.7°
O5'C5'C4'H4'175.5°59.3°
C4'C5'H5'1H5'2116.7°120.0°
C5'C4'O4'C3'121.4°119.6°
C5'C4'O4'H4'118.3°120.9°
C5'C4'C3'H4'118.3°121.0°
C5'C4'O4'C1'136.6°146.0°
C5'C4'C3'O3'95.1°119.8°
C5'C4'C3'C2'143.1°121.5°
C5'C4'C3'H3'22.2°2.8°
H5'1C5'C4'O4'170.7°58.3°
H5'1C5'C4'C3'70.0°59.8°
H5'1C5'C4'H4'50.3°179.2°
H5'2C5'C4'O4'61.2°178.3°
H5'2C5'C4'C3'179.5°60.3°
H5'2C5'C4'H4'59.2°60.8°
O4'C4'C3'H4'120.5°119.5°
O4'C4'C3'O3'143.7°120.6°
O4'C4'C3'C2'21.9°1.9°
O4'C4'C3'H3'99.1°116.7°
C4'O4'C1'C2'2.3°40.0°
C4'O4'C1'N9122.9°158.7°
C4'O4'C1'H1'117.8°78.5°
C3'C4'O4'C1'15.1°26.4°
C4'C3'O3'C2'117.7°114.7°
C4'C3'O3'H3'121.3°122.7°
C4'C3'C2'H3'121.4°118.6°
C4'C3'O3'HO'3179.9°176.2°
C4'C3'C2'O2'99.5°139.2°
C4'C3'C2'C1'19.9°21.0°
C4'C3'C2'H2'141.9°97.2°
H4'C4'O4'C1'105.1°93.1°
H4'C4'C3'O3'23.2°1.1°
H4'C4'C3'C2'98.6°117.6°
H4'C4'C3'H3'140.4°123.8°
O4'C1'C2'C3'11.4°37.1°
O4'C1'C2'O2'108.4°155.3°
O4'C1'C2'N9119.4°118.6°
O4'C1'C2'H1'121.3°118.5°
O4'C1'C2'H2'132.9°81.1°
O4'C1'N9H1'121.3°122.9°
O4'C1'N9C864.4°28.6°
O4'C1'N9C4114.1°151.7°
O3'C3'C2'H3'117.2°122.5°
O3'C3'C2'O2'22.0°20.2°
O3'C3'C2'C1'141.3°98.0°
O3'C3'C2'H2'96.7°143.8°
C2'C3'O3'HO'362.2°61.4°
C3'C2'O2'C1'116.2°112.7°
C3'C2'O2'H2'121.7°123.6°
C3'C2'C1'H2'121.6°118.2°
C3'C2'O2'HO'2180.0°67.2°
C3'C2'C1'N9108.0°155.7°
C3'C2'C1'H1'132.6°81.4°
H3'C3'O3'HO'358.7°61.1°
H3'C3'C2'O2'139.2°102.2°
H3'C3'C2'C1'101.4°139.5°
H3'C3'C2'H2'20.5°21.4°
O2'C2'C1'H2'118.6°123.6°
O2'C2'C1'N9132.2°86.1°
O2'C2'C1'H1'12.8°36.8°
C1'C2'O2'HO'263.8°180.0°
C2'C1'N9H1'120.0°122.9°
C2'C1'N9C854.3°85.7°
C2'C1'N9C4127.2°94.1°
H2'C2'O2'HO'258.3°56.4°
H2'C2'C1'N913.6°37.5°
H2'C2'C1'H1'105.8°160.3°
C1'N9C8C4178.8°179.8°
C1'N9C8N7178.3°180.0°
C1'N9C8H81.7°0.0°
C1'N9C4C5179.4°179.8°
C1'N9C4N32.5°0.7°
H1'C1'N9C8174.3°151.4°
H1'C1'N9C47.2°28.9°
N9C8N7H8180.0°179.9°
N9C8N7C51.2°0.0°
C8N9C4C50.6°0.4°
C8N9C4N3178.7°179.5°
C4N9C8N70.4°0.3°
C4N9C8H8179.6°179.8°
N9C4C5N71.4°0.4°
N9C4C5C6179.5°179.8°
N9C4C5N3178.0°179.3°
N9C4N3C2180.0°179.5°
C8N7C5C6179.3°180.0°
C8N7C5C41.6°0.2°
H8C8N7C5178.7°180.0°
N7C5C6C4177.5°179.7°
N7C5C6N61.6°0.0°
N7C5C6N1179.5°180.0°
N7C5C4N3179.4°179.7°
C5C6N6N1178.8°179.9°
C5C6N6H61180.0°180.0°
C5C6N6H6254.8°0.0°
C5C6N1C21.7°0.1°
C6C5C4N32.5°0.5°
C4C5C6N6179.2°179.7°
C4C5C6N12.0°0.3°
C5C4N3C22.4°0.5°
C6N6H61H62125.2°179.9°
N6C6N1C2179.4°180.0°
N1C6N6H611.2°0.1°
N1C6N6H62124.1°180.0°
C6N1C2N31.9°0.1°
C6N1C2H2178.1°180.0°
N1C2N3H2180.0°179.9°
N1C2N3C42.1°0.2°
H2C2N3C4178.0°179.7°

218500

PDB entries from 2024-04-17

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