FY2
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C | O | doub | 1.21Å | 1.26Å | |
| C | CA | sing | 1.51Å | 1.52Å | |
| N | CA | sing | 1.47Å | 1.47Å | |
| CA | CB | sing | 1.53Å | 1.52Å | |
| CB | CG | sing | 1.51Å | 1.50Å | |
| F2 | CD1 | sing | 1.35Å | 1.33Å | |
| CG | CD1 | doub | 1.38Å | 1.39Å | Aromatic |
| CG | CD2 | sing | 1.38Å | 1.39Å | Aromatic |
| CD1 | CE1 | sing | 1.39Å | 1.38Å | Aromatic |
| CD2 | CE2 | doub | 1.38Å | 1.40Å | Aromatic |
| CE1 | F3 | sing | 1.35Å | 1.34Å | |
| CE1 | CZ | doub | 1.39Å | 1.38Å | Aromatic |
| CE2 | CZ | sing | 1.39Å | 1.39Å | Aromatic |
| CZ | OH | sing | 1.36Å | 1.39Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CB | HB1 | sing | 1.09Å | 1.10Å | |
| CB | HB2 | sing | 1.09Å | 1.10Å | |
| OH | HH | sing | 0.97Å | 0.95Å | |
| CE2 | HE2 | sing | 1.08Å | 1.08Å | |
| CD2 | HD2 | sing | 1.08Å | 1.08Å | |
| C | OXT | sing | 1.34Å | 1.33Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O | C | CA | 121.2° | 120.0° |
| O | C | OXT | 121.0° | 120.1° |
| C | CA | N | 109.1° | 109.4° |
| C | CA | CB | 114.5° | 109.5° |
| C | CA | HA | 107.0° | 109.5° |
| CA | C | OXT | 117.7° | 120.0° |
| N | CA | CB | 111.1° | 109.4° |
| CA | N | H | 109.5° | 111.0° |
| CA | N | H2 | 109.5° | 111.0° |
| N | CA | HA | 107.6° | 109.5° |
| CA | CB | CG | 115.7° | 109.5° |
| CB | CA | HA | 107.1° | 109.5° |
| CA | CB | HB1 | 107.9° | 109.5° |
| CA | CB | HB2 | 107.9° | 109.5° |
| CB | CG | CD1 | 122.7° | 120.0° |
| CB | CG | CD2 | 119.4° | 120.0° |
| CG | CB | HB1 | 107.9° | 109.4° |
| CG | CB | HB2 | 107.9° | 109.4° |
| F2 | CD1 | CG | 120.6° | 120.0° |
| F2 | CD1 | CE1 | 117.6° | 120.0° |
| CD1 | CG | CD2 | 117.9° | 120.1° |
| CG | CD1 | CE1 | 121.8° | 120.0° |
| CG | CD2 | CE2 | 120.8° | 120.2° |
| CG | CD2 | HD2 | 119.6° | 119.9° |
| CD1 | CE1 | F3 | 120.2° | 120.1° |
| CD1 | CE1 | CZ | 119.8° | 119.9° |
| CD2 | CE2 | CZ | 119.7° | 120.0° |
| CD2 | CE2 | HE2 | 120.1° | 120.1° |
| CE2 | CD2 | HD2 | 119.6° | 119.9° |
| F3 | CE1 | CZ | 119.9° | 120.1° |
| CE1 | CZ | CE2 | 119.9° | 119.9° |
| CE1 | CZ | OH | 119.6° | 120.0° |
| CE2 | CZ | OH | 120.5° | 120.1° |
| CZ | CE2 | HE2 | 120.1° | 120.0° |
| CZ | OH | HH | 109.5° | 114.0° |
| H | N | H2 | 109.4° | 111.0° |
| HB1 | CB | HB2 | 109.5° | 109.5° |
| C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O | C | CA | OXT | 176.9° | 180.0° |
| O | C | CA | N | 143.3° | 20.0° |
| O | C | CA | CB | 91.4° | 100.0° |
| O | C | CA | HA | 27.1° | 140.0° |
| O | C | OXT | HXT | 0.0° | 0.0° |
| C | CA | N | CB | 127.2° | 120.0° |
| C | CA | N | HA | 115.8° | 120.0° |
| C | CA | CB | HA | 118.5° | 120.0° |
| C | CA | CB | CG | 169.8° | 175.0° |
| C | CA | N | H | 180.0° | 60.0° |
| C | CA | N | H2 | 60.0° | 176.0° |
| C | CA | CB | HB1 | 69.3° | 65.0° |
| C | CA | CB | HB2 | 48.9° | 55.1° |
| CA | C | OXT | HXT | 176.9° | 180.0° |
| N | CA | CB | HA | 117.3° | 120.0° |
| N | CA | CB | CG | 66.0° | 65.0° |
| CA | N | H | H2 | 120.0° | 124.0° |
| N | CA | CB | HB1 | 54.9° | 55.0° |
| N | CA | CB | HB2 | 173.1° | 175.0° |
| N | CA | C | OXT | 33.5° | 160.0° |
| CA | CB | CG | HB1 | 120.9° | 120.1° |
| CA | CB | CG | HB2 | 120.9° | 120.0° |
| CA | CB | CG | CD1 | 132.9° | 85.0° |
| CA | CB | CG | CD2 | 48.2° | 95.2° |
| CB | CA | N | H | 52.8° | 59.9° |
| CB | CA | N | H2 | 172.8° | 64.0° |
| CA | CB | HB1 | HB2 | 117.1° | 120.1° |
| CB | CA | C | OXT | 91.8° | 80.0° |
| CB | CG | CD1 | F2 | 0.9° | 0.0° |
| CB | CG | CD1 | CD2 | 179.0° | 179.8° |
| CB | CG | CD1 | CE1 | 179.6° | 180.0° |
| CB | CG | CD2 | CE2 | 179.6° | 179.7° |
| CG | CB | CA | HA | 51.3° | 55.0° |
| CG | CB | HB1 | HB2 | 117.2° | 119.9° |
| CB | CG | CD2 | HD2 | 0.4° | 0.0° |
| F2 | CD1 | CG | CE1 | 178.7° | 180.0° |
| F2 | CD1 | CG | CD2 | 178.1° | 179.8° |
| F2 | CD1 | CE1 | F3 | 1.0° | 0.0° |
| F2 | CD1 | CE1 | CZ | 178.9° | 180.0° |
| CD1 | CG | CD2 | CE2 | 0.6° | 0.5° |
| CG | CD1 | CE1 | F3 | 179.7° | 180.0° |
| CG | CD1 | CE1 | CZ | 0.1° | 0.0° |
| CD1 | CG | CB | HB1 | 11.9° | 35.1° |
| CD1 | CG | CB | HB2 | 106.2° | 155.0° |
| CD1 | CG | CD2 | HD2 | 179.4° | 179.8° |
| CD2 | CG | CD1 | CE1 | 0.7° | 0.3° |
| CG | CD2 | CE2 | HD2 | 180.0° | 179.7° |
| CG | CD2 | CE2 | CZ | 0.1° | 0.6° |
| CD2 | CG | CB | HB1 | 169.1° | 144.7° |
| CD2 | CG | CB | HB2 | 72.7° | 24.8° |
| CG | CD2 | CE2 | HE2 | 179.9° | 179.7° |
| CD1 | CE1 | F3 | CZ | 179.8° | 180.0° |
| CD1 | CE1 | CZ | CE2 | 0.9° | 0.0° |
| CD1 | CE1 | CZ | OH | 179.4° | 179.9° |
| CD2 | CE2 | CZ | CE1 | 0.9° | 0.3° |
| CD2 | CE2 | CZ | HE2 | 180.0° | 179.7° |
| CD2 | CE2 | CZ | OH | 179.4° | 179.7° |
| F3 | CE1 | CZ | CE2 | 178.9° | 180.0° |
| F3 | CE1 | CZ | OH | 0.4° | 0.1° |
| CE1 | CZ | CE2 | OH | 178.5° | 180.0° |
| CE1 | CZ | OH | HH | 180.0° | 90.0° |
| CE1 | CZ | CE2 | HE2 | 179.1° | 180.0° |
| CE2 | CZ | OH | HH | 1.5° | 89.9° |
| CZ | CE2 | CD2 | HD2 | 179.9° | 179.7° |
| OH | CZ | CE2 | HE2 | 0.6° | 0.0° |
| H | N | CA | HA | 64.2° | 180.0° |
| H2 | N | CA | HA | 55.8° | 56.0° |
| HA | CA | CB | HB1 | 172.2° | 175.0° |
| HA | CA | CB | HB2 | 69.6° | 65.0° |
| HA | CA | C | OXT | 149.7° | 40.0° |
| HE2 | CE2 | CD2 | HD2 | 0.1° | 0.0° |
