FNU
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
P | O2P | sing | 1.61Å | 1.52Å | |
N1 | C6 | sing | 1.37Å | 1.35Å | |
N1 | C2 | sing | 1.35Å | 1.33Å | |
C2 | N2 | sing | 1.34Å | 1.36Å | |
N2 | C4 | sing | 1.35Å | 1.35Å | |
N2 | HN2 | sing | 0.97Å | 1.00Å | |
O2 | C2 | doub | 1.22Å | 1.33Å | |
N3 | C6 | sing | 1.37Å | 1.35Å | |
N3 | HN3 | sing | 0.97Å | 1.00Å | |
N3 | H14 | sing | 0.97Å | 1.00Å | |
C4 | O4 | doub | 1.22Å | 1.33Å | |
C5 | C4 | sing | 1.40Å | 1.39Å | |
C5 | F24 | sing | 1.35Å | 1.49Å | |
C6 | C5 | doub | 1.37Å | 1.37Å | |
C1' | N1 | sing | 1.46Å | 1.48Å | |
C1' | C2' | sing | 1.55Å | 1.54Å | |
C1' | H1' | sing | 1.09Å | 1.10Å | |
O1P | P | doub | 1.48Å | 1.51Å | |
C2' | O2' | sing | 1.43Å | 1.43Å | |
C2' | H2' | sing | 1.09Å | 1.10Å | |
O2' | HO2' | sing | 0.97Å | 0.95Å | |
O2P | HO2P | sing | 0.97Å | 0.95Å | |
C3' | C2' | sing | 1.55Å | 1.53Å | |
C3' | H3' | sing | 1.09Å | 1.10Å | |
O3' | C3' | sing | 1.43Å | 1.43Å | |
O3' | HO3' | sing | 0.97Å | 0.95Å | |
O3P | P | sing | 1.61Å | 1.53Å | |
O3P | HO3P | sing | 0.97Å | 0.95Å | |
C4' | C3' | sing | 1.54Å | 1.53Å | |
C4' | O4' | sing | 1.44Å | 1.42Å | |
C4' | C5' | sing | 1.53Å | 1.52Å | |
C4' | H4' | sing | 1.09Å | 1.10Å | |
O4' | C1' | sing | 1.44Å | 1.45Å | |
C5' | H5' | sing | 1.09Å | 1.10Å | |
C5' | H5'A | sing | 1.09Å | 1.10Å | |
O5' | P | sing | 1.61Å | 1.61Å | |
O5' | C5' | sing | 1.43Å | 1.41Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O2P | P | O1P | 112.6° | 109.5° |
P | O2P | HO2P | 109.5° | 114.0° |
O2P | P | O3P | 115.5° | 109.4° |
O2P | P | O5' | 102.2° | 109.5° |
C6 | N1 | C2 | 117.3° | 120.4° |
N1 | C6 | N3 | 120.2° | 120.3° |
N1 | C6 | C5 | 122.8° | 119.4° |
C6 | N1 | C1' | 121.4° | 119.8° |
N1 | C2 | N2 | 124.6° | 121.0° |
N1 | C2 | O2 | 116.6° | 119.5° |
C2 | N1 | C1' | 121.2° | 119.8° |
C2 | N2 | C4 | 116.3° | 120.6° |
C2 | N2 | HN2 | 121.8° | 119.8° |
N2 | C2 | O2 | 118.8° | 119.5° |
C4 | N2 | HN2 | 121.8° | 119.7° |
N2 | C4 | O4 | 118.3° | 120.2° |
N2 | C4 | C5 | 122.7° | 119.6° |
C6 | N3 | HN3 | 109.5° | 120.0° |
C6 | N3 | H14 | 109.4° | 119.9° |
N3 | C6 | C5 | 117.0° | 120.3° |
HN3 | N3 | H14 | 109.5° | 120.0° |
O4 | C4 | C5 | 119.0° | 120.2° |
C4 | C5 | F24 | 123.3° | 120.5° |
C4 | C5 | C6 | 116.3° | 119.1° |
F24 | C5 | C6 | 119.8° | 120.4° |
N1 | C1' | C2' | 113.9° | 110.6° |
N1 | C1' | H1' | 103.5° | 110.6° |
N1 | C1' | O4' | 111.6° | 110.6° |
C2' | C1' | H1' | 110.3° | 110.6° |
C1' | C2' | O2' | 114.7° | 111.0° |
C1' | C2' | H2' | 114.1° | 110.9° |
C1' | C2' | C3' | 100.3° | 102.1° |
C2' | C1' | O4' | 105.0° | 103.5° |
H1' | C1' | O4' | 112.6° | 110.8° |
O1P | P | O3P | 112.0° | 109.5° |
O1P | P | O5' | 107.8° | 109.5° |
O2' | C2' | H2' | 99.8° | 110.8° |
C2' | O2' | HO2' | 109.5° | 114.0° |
O2' | C2' | C3' | 114.4° | 110.9° |
H2' | C2' | C3' | 114.4° | 110.9° |
C2' | C3' | H3' | 113.9° | 110.5° |
C2' | C3' | O3' | 109.4° | 110.4° |
C2' | C3' | C4' | 102.4° | 104.2° |
H3' | C3' | O3' | 107.6° | 110.4° |
H3' | C3' | C4' | 114.1° | 110.5° |
C3' | O3' | HO3' | 109.5° | 114.1° |
O3' | C3' | C4' | 109.2° | 110.6° |
P | O3P | HO3P | 109.5° | 114.0° |
O3P | P | O5' | 105.7° | 109.5° |
C3' | C4' | O4' | 104.7° | 107.3° |
C3' | C4' | C5' | 111.9° | 109.9° |
C3' | C4' | H4' | 111.6° | 109.9° |
O4' | C4' | C5' | 111.3° | 109.9° |
O4' | C4' | H4' | 112.3° | 109.9° |
C4' | O4' | C1' | 111.2° | 107.0° |
C5' | C4' | H4' | 105.2° | 110.0° |
C4' | C5' | H5' | 111.1° | 109.4° |
C4' | C5' | H5'A | 111.1° | 109.5° |
C4' | C5' | O5' | 104.8° | 109.5° |
H5' | C5' | H5'A | 107.8° | 109.5° |
H5' | C5' | O5' | 111.1° | 109.5° |
H5'A | C5' | O5' | 111.1° | 109.5° |
P | O5' | C5' | 124.9° | 123.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O2P | P | O1P | O3P | 132.1° | 120.0° |
O2P | P | O1P | O5' | 112.0° | 120.0° |
O2P | P | O3P | O5' | 112.2° | 120.0° |
O2P | P | O3P | HO3P | 130.6° | 60.0° |
O2P | P | O5' | C5' | 30.9° | 175.1° |
C6 | N1 | C2 | C1' | 177.2° | 179.7° |
C6 | N1 | C2 | N2 | 0.3° | 0.1° |
C6 | N1 | C2 | O2 | 179.4° | 180.0° |
N1 | C6 | N3 | C5 | 179.5° | 179.9° |
N1 | C6 | N3 | HN3 | 180.0° | 5.0° |
N1 | C6 | N3 | H14 | 60.0° | 174.9° |
N1 | C6 | C5 | C4 | 0.8° | 0.1° |
N1 | C6 | C5 | F24 | 170.9° | 179.9° |
C6 | N1 | C1' | C2' | 129.5° | 112.0° |
C6 | N1 | C1' | H1' | 9.6° | 10.8° |
C6 | N1 | C1' | O4' | 111.8° | 133.9° |
N1 | C2 | N2 | O2 | 179.7° | 179.9° |
N1 | C2 | N2 | C4 | 1.6° | 0.0° |
N1 | C2 | N2 | HN2 | 178.4° | 180.0° |
C2 | N1 | C6 | N3 | 178.8° | 180.0° |
C2 | N1 | C6 | C5 | 0.7° | 0.1° |
C2 | N1 | C1' | C2' | 53.4° | 67.6° |
C2 | N1 | C1' | H1' | 173.2° | 169.5° |
C2 | N1 | C1' | O4' | 65.3° | 46.4° |
C2 | N2 | C4 | HN2 | 180.0° | 180.0° |
C2 | N2 | C4 | O4 | 179.5° | 180.0° |
C2 | N2 | C4 | C5 | 3.3° | 0.1° |
N2 | C2 | N1 | C1' | 177.6° | 179.7° |
C4 | N2 | C2 | O2 | 178.7° | 179.9° |
N2 | C4 | O4 | C5 | 177.3° | 179.9° |
N2 | C4 | C5 | F24 | 168.5° | 180.0° |
N2 | C4 | C5 | C6 | 2.9° | 0.0° |
HN2 | N2 | C2 | O2 | 1.3° | 0.1° |
HN2 | N2 | C4 | O4 | 0.5° | 0.0° |
HN2 | N2 | C4 | C5 | 176.7° | 180.0° |
O2 | C2 | N1 | C1' | 2.1° | 0.3° |
C6 | N3 | HN3 | H14 | 120.0° | 179.9° |
N3 | C6 | C5 | C4 | 179.7° | 180.0° |
N3 | C6 | C5 | F24 | 8.6° | 0.0° |
N3 | C6 | N1 | C1' | 1.5° | 0.3° |
HN3 | N3 | C6 | C5 | 0.5° | 174.9° |
H14 | N3 | C6 | C5 | 120.5° | 5.2° |
O4 | C4 | C5 | F24 | 8.8° | 0.1° |
O4 | C4 | C5 | C6 | 179.9° | 179.9° |
C4 | C5 | F24 | C6 | 171.1° | 180.0° |
C5 | C6 | N1 | C1' | 178.0° | 179.8° |
N1 | C1' | C2' | H1' | 115.9° | 122.8° |
N1 | C1' | C2' | O4' | 122.5° | 118.5° |
N1 | C1' | H1' | O4' | 120.8° | 123.0° |
N1 | C1' | C2' | O2' | 81.5° | 86.3° |
N1 | C1' | C2' | H2' | 32.7° | 37.3° |
N1 | C1' | C2' | C3' | 155.4° | 155.5° |
N1 | C1' | O4' | C4' | 137.2° | 158.5° |
C2' | C1' | H1' | O4' | 117.0° | 114.1° |
C1' | C2' | O2' | H2' | 122.3° | 123.6° |
C1' | C2' | O2' | C3' | 115.1° | 112.7° |
C1' | C2' | H2' | C3' | 114.6° | 112.7° |
C1' | C2' | O2' | HO2' | 180.0° | 180.0° |
C1' | C2' | C3' | H3' | 163.4° | 139.6° |
C1' | C2' | C3' | O3' | 76.1° | 98.0° |
C1' | C2' | C3' | C4' | 39.7° | 20.8° |
C2' | C1' | O4' | C4' | 13.3° | 40.0° |
H1' | C1' | C2' | O2' | 34.4° | 36.5° |
H1' | C1' | C2' | H2' | 148.6° | 160.2° |
H1' | C1' | C2' | C3' | 88.7° | 81.7° |
H1' | C1' | O4' | C4' | 106.8° | 78.5° |
O1P | P | O2P | HO2P | 0.0° | 59.9° |
O1P | P | O3P | O5' | 117.2° | 120.0° |
O1P | P | O3P | HO3P | 0.0° | 180.0° |
O1P | P | O5' | C5' | 87.9° | 55.0° |
O2' | C2' | H2' | C3' | 122.6° | 123.7° |
O2' | C2' | C3' | H3' | 73.3° | 102.2° |
O2' | C2' | C3' | O3' | 47.2° | 20.3° |
O2' | C2' | C3' | C4' | 163.0° | 139.1° |
O2' | C2' | C1' | O4' | 156.0° | 155.2° |
H2' | C2' | O2' | HO2' | 57.6° | 56.4° |
H2' | C2' | C3' | H3' | 40.9° | 21.4° |
H2' | C2' | C3' | O3' | 161.4° | 143.9° |
H2' | C2' | C3' | C4' | 82.8° | 97.3° |
H2' | C2' | C1' | O4' | 89.7° | 81.2° |
HO2' | O2' | C2' | C3' | 64.9° | 67.3° |
HO2P | O2P | P | O3P | 130.4° | 60.1° |
HO2P | O2P | P | O5' | 115.4° | 180.0° |
C2' | C3' | H3' | O3' | 121.5° | 122.5° |
C2' | C3' | H3' | C4' | 117.1° | 114.8° |
C2' | C3' | O3' | C4' | 111.3° | 114.8° |
C2' | C3' | O3' | HO3' | 180.0° | 61.5° |
C2' | C3' | C4' | O4' | 33.2° | 2.0° |
C2' | C3' | C4' | C5' | 87.5° | 121.5° |
C2' | C3' | C4' | H4' | 154.9° | 117.4° |
C3' | C2' | C1' | O4' | 32.9° | 37.0° |
H3' | C3' | O3' | C4' | 124.4° | 122.6° |
H3' | C3' | O3' | HO3' | 55.7° | 61.0° |
H3' | C3' | C4' | O4' | 156.8° | 116.7° |
H3' | C3' | C4' | C5' | 36.1° | 2.7° |
H3' | C3' | C4' | H4' | 81.5° | 123.9° |
O3' | C3' | C4' | O4' | 82.7° | 120.7° |
O3' | C3' | C4' | C5' | 156.6° | 119.8° |
O3' | C3' | C4' | H4' | 39.0° | 1.3° |
HO3' | O3' | C3' | C4' | 68.7° | 176.3° |
O3P | P | O5' | C5' | 152.2° | 65.0° |
HO3P | O3P | P | O5' | 117.2° | 60.0° |
C3' | C4' | O4' | C5' | 121.1° | 119.5° |
C3' | C4' | O4' | H4' | 121.3° | 119.4° |
C3' | C4' | C5' | H4' | 121.4° | 121.1° |
C3' | C4' | O4' | C1' | 12.5° | 26.5° |
C3' | C4' | C5' | H5' | 39.5° | 55.0° |
C3' | C4' | C5' | H5'A | 159.5° | 65.0° |
C3' | C4' | C5' | O5' | 80.5° | 175.0° |
O4' | C4' | C5' | H4' | 121.8° | 121.1° |
O4' | C4' | C5' | H5' | 77.3° | 172.9° |
O4' | C4' | C5' | H5'A | 42.7° | 52.9° |
O4' | C4' | C5' | O5' | 162.7° | 67.2° |
C5' | C4' | O4' | C1' | 108.6° | 146.0° |
C4' | C5' | H5' | H5'A | 121.9° | 120.0° |
C4' | C5' | H5' | O5' | 116.2° | 120.0° |
C4' | C5' | H5'A | O5' | 116.2° | 120.0° |
C4' | C5' | O5' | P | 179.8° | 180.0° |
H4' | C4' | O4' | C1' | 133.8° | 92.9° |
H4' | C4' | C5' | H5' | 160.9° | 66.1° |
H4' | C4' | C5' | H5'A | 79.1° | 173.9° |
H4' | C4' | C5' | O5' | 40.9° | 53.9° |
H5' | C5' | H5'A | O5' | 121.9° | 120.0° |
H5' | C5' | O5' | P | 59.8° | 60.1° |
H5'A | C5' | O5' | P | 60.2° | 60.0° |