FNS
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | C2 | sing | 1.33Å | 1.37Å | |
N1 | C10 | doub | 1.32Å | 1.39Å | |
C2 | O2 | doub | 1.22Å | 1.22Å | |
C2 | N3 | sing | 1.34Å | 1.43Å | |
N3 | C4 | sing | 1.35Å | 1.40Å | |
N3 | HN3 | sing | 0.97Å | 1.00Å | |
C4 | O4 | doub | 1.22Å | 1.24Å | |
C4 | C4A | sing | 1.48Å | 1.44Å | |
C4A | N5 | doub | 1.31Å | 1.34Å | |
C4A | C10 | sing | 1.47Å | 1.40Å | |
N5 | S | sing | 1.66Å | 1.85Å | |
N5 | C5A | sing | 1.34Å | 1.35Å | |
S | O1S | sing | 1.45Å | 1.56Å | |
S | O2S | doub | 1.45Å | 1.56Å | |
S | O3S | doub | 1.45Å | 1.56Å | |
C5A | C6 | doub | 1.41Å | 1.37Å | Aromatic |
C5A | C9A | sing | 1.41Å | 1.38Å | Aromatic |
C6 | C7 | sing | 1.36Å | 1.38Å | Aromatic |
C6 | H6 | sing | 1.08Å | 1.08Å | |
C7 | C7M | sing | 1.51Å | 1.52Å | |
C7 | C8 | doub | 1.39Å | 1.39Å | Aromatic |
C7M | HM71 | sing | 1.09Å | 1.10Å | |
C7M | HM72 | sing | 1.09Å | 1.10Å | |
C7M | HM73 | sing | 1.09Å | 1.10Å | |
C8 | C8M | sing | 1.51Å | 1.50Å | |
C8 | C9 | sing | 1.38Å | 1.37Å | Aromatic |
C8M | HM81 | sing | 1.09Å | 1.10Å | |
C8M | HM82 | sing | 1.09Å | 1.10Å | |
C8M | HM83 | sing | 1.09Å | 1.10Å | |
C9 | C9A | doub | 1.39Å | 1.38Å | Aromatic |
C9 | H9 | sing | 1.08Å | 1.08Å | |
C9A | N10 | sing | 1.38Å | 1.41Å | |
N10 | C10 | sing | 1.36Å | 1.39Å | |
N10 | C1' | sing | 1.46Å | 1.33Å | |
C1' | C2' | sing | 1.53Å | 1.51Å | |
C1' | H1'1 | sing | 1.09Å | 1.10Å | |
C1' | H1'2 | sing | 1.09Å | 1.10Å | |
C2' | O2' | sing | 1.43Å | 1.45Å | |
C2' | C3' | sing | 1.53Å | 1.51Å | |
C2' | H2' | sing | 1.09Å | 1.10Å | |
O2' | HO2' | sing | 0.97Å | 0.95Å | |
C3' | O3' | sing | 1.43Å | 1.44Å | |
C3' | C4' | sing | 1.53Å | 1.51Å | |
C3' | H3' | sing | 1.09Å | 1.10Å | |
O3' | HO3' | sing | 0.97Å | 0.95Å | |
C4' | O4' | sing | 1.43Å | 1.42Å | |
C4' | C5' | sing | 1.53Å | 1.46Å | |
C4' | H4' | sing | 1.09Å | 1.10Å | |
O4' | HO4' | sing | 0.97Å | 0.95Å | |
C5' | O5' | sing | 1.43Å | 1.39Å | |
C5' | H5'1 | sing | 1.09Å | 1.10Å | |
C5' | H5'2 | sing | 1.09Å | 1.10Å | |
O5' | P | sing | 1.61Å | 1.59Å | |
P | O1P | doub | 1.48Å | 1.48Å | |
P | O2P | sing | 1.61Å | 1.50Å | |
P | O3P | sing | 1.61Å | 1.48Å | |
O2P | HOP2 | sing | 0.97Å | 0.95Å | |
O3P | HOP3 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | N1 | C10 | 123.8° | 121.5° |
N1 | C2 | O2 | 120.4° | 118.0° |
N1 | C2 | N3 | 115.0° | 124.1° |
N1 | C10 | C4A | 116.1° | 118.7° |
N1 | C10 | N10 | 128.3° | 122.3° |
O2 | C2 | N3 | 124.6° | 117.9° |
C2 | N3 | C4 | 127.0° | 121.3° |
C2 | N3 | HN3 | 116.5° | 119.4° |
C4 | N3 | HN3 | 116.5° | 119.3° |
N3 | C4 | O4 | 120.5° | 121.4° |
N3 | C4 | C4A | 109.9° | 117.1° |
O4 | C4 | C4A | 129.5° | 121.5° |
C4 | C4A | N5 | 121.3° | 122.2° |
C4 | C4A | C10 | 124.7° | 117.3° |
N5 | C4A | C10 | 113.9° | 120.5° |
C4A | N5 | S | 121.8° | 119.7° |
C4A | N5 | C5A | 116.9° | 120.7° |
C4A | C10 | N10 | 115.5° | 119.0° |
S | N5 | C5A | 121.3° | 119.6° |
N5 | S | O1S | 110.5° | 106.7° |
N5 | S | O2S | 110.5° | 106.8° |
N5 | S | O3S | 109.5° | 106.8° |
N5 | C5A | C6 | 122.8° | 119.8° |
N5 | C5A | C9A | 114.9° | 120.9° |
O1S | S | O2S | 108.5° | 112.0° |
O1S | S | O3S | 109.4° | 112.1° |
O2S | S | O3S | 108.5° | 112.1° |
C6 | C5A | C9A | 120.6° | 119.2° |
C5A | C6 | C7 | 119.4° | 120.0° |
C5A | C6 | H6 | 120.3° | 120.0° |
C5A | C9A | C9 | 120.0° | 119.6° |
C5A | C9A | N10 | 115.1° | 120.3° |
C7 | C6 | H6 | 120.3° | 120.0° |
C6 | C7 | C7M | 118.2° | 119.6° |
C6 | C7 | C8 | 119.7° | 120.7° |
C7M | C7 | C8 | 122.0° | 119.6° |
C7 | C7M | HM71 | 109.5° | 109.5° |
C7 | C7M | HM72 | 109.5° | 109.5° |
C7 | C7M | HM73 | 109.5° | 109.5° |
C7 | C8 | C8M | 120.6° | 119.7° |
C7 | C8 | C9 | 120.2° | 120.6° |
HM71 | C7M | HM72 | 109.5° | 109.4° |
HM71 | C7M | HM73 | 109.5° | 109.5° |
HM72 | C7M | HM73 | 109.5° | 109.4° |
C8M | C8 | C9 | 119.0° | 119.7° |
C8 | C8M | HM81 | 109.5° | 109.5° |
C8 | C8M | HM82 | 109.4° | 109.5° |
C8 | C8M | HM83 | 109.5° | 109.5° |
C8 | C9 | C9A | 119.7° | 119.9° |
C8 | C9 | H9 | 120.1° | 120.1° |
HM81 | C8M | HM82 | 109.4° | 109.4° |
HM81 | C8M | HM83 | 109.4° | 109.5° |
HM82 | C8M | HM83 | 109.5° | 109.4° |
C9A | C9 | H9 | 120.2° | 120.1° |
C9 | C9A | N10 | 124.9° | 120.1° |
C9A | N10 | C10 | 122.1° | 118.5° |
C9A | N10 | C1' | 120.9° | 120.8° |
C10 | N10 | C1' | 116.9° | 120.8° |
N10 | C1' | C2' | 109.5° | 109.5° |
N10 | C1' | H1'1 | 109.5° | 109.5° |
N10 | C1' | H1'2 | 109.5° | 109.5° |
C2' | C1' | H1'1 | 109.5° | 109.5° |
C2' | C1' | H1'2 | 109.5° | 109.4° |
C1' | C2' | O2' | 109.9° | 109.5° |
C1' | C2' | C3' | 108.6° | 109.5° |
C1' | C2' | H2' | 108.0° | 109.5° |
H1'1 | C1' | H1'2 | 109.4° | 109.5° |
O2' | C2' | C3' | 113.6° | 109.5° |
O2' | C2' | H2' | 108.7° | 109.4° |
C2' | O2' | HO2' | 109.5° | 114.0° |
C3' | C2' | H2' | 107.9° | 109.5° |
C2' | C3' | O3' | 108.1° | 109.5° |
C2' | C3' | C4' | 112.6° | 109.5° |
C2' | C3' | H3' | 108.7° | 109.5° |
O3' | C3' | C4' | 109.1° | 109.5° |
O3' | C3' | H3' | 109.6° | 109.5° |
C3' | O3' | HO3' | 109.5° | 114.0° |
C4' | C3' | H3' | 108.8° | 109.5° |
C3' | C4' | O4' | 117.5° | 109.5° |
C3' | C4' | C5' | 103.3° | 109.4° |
C3' | C4' | H4' | 108.0° | 109.4° |
O4' | C4' | C5' | 109.7° | 109.5° |
O4' | C4' | H4' | 109.2° | 109.5° |
C4' | O4' | HO4' | 109.5° | 114.0° |
C5' | C4' | H4' | 108.6° | 109.5° |
C4' | C5' | O5' | 109.0° | 109.5° |
C4' | C5' | H5'1 | 109.6° | 109.5° |
C4' | C5' | H5'2 | 109.6° | 109.5° |
O5' | C5' | H5'1 | 109.6° | 109.4° |
O5' | C5' | H5'2 | 109.6° | 109.5° |
C5' | O5' | P | 121.7° | 123.0° |
H5'1 | C5' | H5'2 | 109.4° | 109.5° |
O5' | P | O1P | 103.4° | 109.5° |
O5' | P | O2P | 104.7° | 109.4° |
O5' | P | O3P | 98.6° | 109.5° |
O1P | P | O2P | 116.6° | 109.5° |
O1P | P | O3P | 114.9° | 109.5° |
O2P | P | O3P | 115.3° | 109.5° |
P | O2P | HOP2 | 109.5° | 114.0° |
P | O3P | HOP3 | 109.5° | 113.9° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N1 | C2 | O2 | N3 | 179.5° | 179.9° |
N1 | C2 | N3 | C4 | 5.8° | 0.1° |
N1 | C2 | N3 | HN3 | 174.2° | 180.0° |
C2 | N1 | C10 | C4A | 0.8° | 0.0° |
C2 | N1 | C10 | N10 | 177.3° | 180.0° |
C10 | N1 | C2 | O2 | 168.6° | 180.0° |
C10 | N1 | C2 | N3 | 10.9° | 0.1° |
N1 | C10 | C4A | C4 | 16.5° | 0.0° |
N1 | C10 | C4A | N5 | 159.6° | 180.0° |
N1 | C10 | C4A | N10 | 178.3° | 180.0° |
N1 | C10 | N10 | C9A | 171.0° | 180.0° |
N1 | C10 | N10 | C1' | 6.8° | 0.0° |
O2 | C2 | N3 | C4 | 173.8° | 180.0° |
O2 | C2 | N3 | HN3 | 6.2° | 0.1° |
C2 | N3 | C4 | HN3 | 180.0° | 179.9° |
C2 | N3 | C4 | O4 | 173.3° | 180.0° |
C2 | N3 | C4 | C4A | 8.5° | 0.1° |
N3 | C4 | O4 | C4A | 177.7° | 179.9° |
N3 | C4 | C4A | N5 | 155.7° | 180.0° |
N3 | C4 | C4A | C10 | 20.1° | 0.0° |
HN3 | N3 | C4 | O4 | 6.6° | 0.1° |
HN3 | N3 | C4 | C4A | 171.5° | 180.0° |
O4 | C4 | C4A | N5 | 22.2° | 0.1° |
O4 | C4 | C4A | C10 | 162.0° | 179.9° |
C4 | C4A | N5 | C10 | 176.2° | 180.0° |
C4 | C4A | N5 | S | 51.5° | 0.0° |
C4 | C4A | N5 | C5A | 132.4° | 179.9° |
C4 | C4A | C10 | N10 | 165.2° | 180.0° |
C4A | N5 | S | C5A | 176.0° | 180.0° |
C4A | N5 | S | O1S | 16.2° | 80.6° |
C4A | N5 | S | O2S | 136.3° | 159.4° |
C4A | N5 | S | O3S | 104.3° | 39.4° |
C4A | N5 | C5A | C6 | 142.7° | 180.0° |
C4A | N5 | C5A | C9A | 52.1° | 0.1° |
N5 | C4A | C10 | N10 | 18.7° | 0.0° |
C10 | C4A | N5 | S | 124.8° | 180.0° |
C10 | C4A | N5 | C5A | 51.4° | 0.1° |
C4A | C10 | N10 | C9A | 11.0° | 0.0° |
C4A | C10 | N10 | C1' | 171.3° | 180.0° |
N5 | S | O1S | O2S | 121.3° | 116.5° |
N5 | S | O1S | O3S | 120.6° | 116.5° |
N5 | S | O2S | O3S | 120.0° | 116.6° |
S | N5 | C5A | C6 | 41.1° | 0.0° |
S | N5 | C5A | C9A | 124.0° | 180.0° |
C5A | N5 | S | O1S | 167.8° | 99.4° |
C5A | N5 | S | O2S | 47.7° | 20.5° |
C5A | N5 | S | O3S | 71.7° | 140.6° |
N5 | C5A | C6 | C9A | 164.3° | 179.9° |
N5 | C5A | C6 | C7 | 158.2° | 180.0° |
N5 | C5A | C6 | H6 | 21.8° | 0.1° |
N5 | C5A | C9A | C9 | 158.4° | 179.9° |
N5 | C5A | C9A | N10 | 19.5° | 0.0° |
O1S | S | O2S | O3S | 118.7° | 126.9° |
C5A | C6 | C7 | H6 | 180.0° | 180.0° |
C5A | C6 | C7 | C7M | 177.9° | 180.0° |
C5A | C6 | C7 | C8 | 0.8° | 0.1° |
C6 | C5A | C9A | C9 | 7.1° | 0.0° |
C6 | C5A | C9A | N10 | 175.1° | 180.0° |
C9A | C5A | C6 | C7 | 6.1° | 0.0° |
C9A | C5A | C6 | H6 | 173.9° | 180.0° |
C5A | C9A | C9 | C8 | 2.8° | 0.0° |
C5A | C9A | C9 | N10 | 177.6° | 179.9° |
C5A | C9A | C9 | H9 | 177.2° | 179.9° |
C5A | C9A | N10 | C10 | 10.7° | 0.0° |
C5A | C9A | N10 | C1' | 171.6° | 180.0° |
C6 | C7 | C7M | C8 | 177.0° | 179.9° |
C6 | C7 | C7M | HM71 | 91.4° | 90.0° |
C6 | C7 | C7M | HM72 | 148.6° | 150.0° |
C6 | C7 | C7M | HM73 | 28.6° | 30.0° |
C6 | C7 | C8 | C8M | 178.9° | 180.0° |
C6 | C7 | C8 | C9 | 3.4° | 0.0° |
H6 | C6 | C7 | C7M | 2.1° | 0.0° |
H6 | C6 | C7 | C8 | 179.2° | 180.0° |
C7 | C7M | HM71 | HM72 | 120.0° | 120.0° |
C7 | C7M | HM71 | HM73 | 120.0° | 120.1° |
C7 | C7M | HM72 | HM73 | 120.0° | 120.0° |
C7M | C7 | C8 | C8M | 2.0° | 0.1° |
C7M | C7 | C8 | C9 | 173.5° | 180.0° |
C8 | C7 | C7M | HM71 | 91.6° | 89.9° |
C8 | C7 | C7M | HM72 | 28.4° | 30.1° |
C8 | C7 | C7M | HM73 | 148.4° | 150.0° |
C7 | C8 | C8M | C9 | 175.6° | 180.0° |
C7 | C8 | C8M | HM81 | 92.3° | 90.1° |
C7 | C8 | C8M | HM82 | 147.7° | 150.0° |
C7 | C8 | C8M | HM83 | 27.7° | 30.0° |
C7 | C8 | C9 | C9A | 2.4° | 0.0° |
C7 | C8 | C9 | H9 | 177.6° | 179.9° |
HM71 | C7M | HM72 | HM73 | 120.0° | 120.0° |
C8 | C8M | HM81 | HM82 | 120.0° | 120.0° |
C8 | C8M | HM81 | HM83 | 120.0° | 120.1° |
C8 | C8M | HM82 | HM83 | 120.0° | 120.0° |
C8M | C8 | C9 | C9A | 178.0° | 180.0° |
C8M | C8 | C9 | H9 | 2.0° | 0.1° |
C9 | C8 | C8M | HM81 | 92.1° | 90.0° |
C9 | C8 | C8M | HM82 | 27.9° | 30.0° |
C9 | C8 | C8M | HM83 | 147.9° | 150.0° |
C8 | C9 | C9A | H9 | 180.0° | 179.9° |
C8 | C9 | C9A | N10 | 179.6° | 180.0° |
HM81 | C8M | HM82 | HM83 | 120.0° | 120.0° |
C9 | C9A | N10 | C10 | 171.6° | 180.0° |
C9 | C9A | N10 | C1' | 6.1° | 0.1° |
H9 | C9 | C9A | N10 | 0.4° | 0.1° |
C9A | N10 | C10 | C1' | 177.8° | 179.9° |
C9A | N10 | C1' | C2' | 94.1° | 90.1° |
C9A | N10 | C1' | H1'1 | 25.9° | 150.0° |
C9A | N10 | C1' | H1'2 | 145.9° | 29.9° |
C10 | N10 | C1' | C2' | 83.7° | 90.0° |
C10 | N10 | C1' | H1'1 | 156.3° | 30.0° |
C10 | N10 | C1' | H1'2 | 36.3° | 150.0° |
N10 | C1' | C2' | H1'1 | 120.0° | 120.0° |
N10 | C1' | C2' | H1'2 | 120.0° | 120.0° |
N10 | C1' | H1'1 | H1'2 | 120.0° | 120.0° |
N10 | C1' | C2' | O2' | 75.3° | 60.0° |
N10 | C1' | C2' | C3' | 159.9° | 180.0° |
N10 | C1' | C2' | H2' | 43.2° | 60.0° |
C2' | C1' | H1'1 | H1'2 | 120.0° | 120.0° |
C1' | C2' | O2' | C3' | 121.9° | 120.0° |
C1' | C2' | O2' | H2' | 118.0° | 120.0° |
C1' | C2' | C3' | H2' | 116.8° | 120.0° |
C1' | C2' | O2' | HO2' | 180.0° | 60.0° |
C1' | C2' | C3' | O3' | 57.6° | 60.0° |
C1' | C2' | C3' | C4' | 62.9° | 180.0° |
C1' | C2' | C3' | H3' | 176.5° | 60.0° |
H1'1 | C1' | C2' | O2' | 164.7° | 180.0° |
H1'1 | C1' | C2' | C3' | 39.9° | 60.0° |
H1'1 | C1' | C2' | H2' | 76.9° | 60.0° |
H1'2 | C1' | C2' | O2' | 44.7° | 60.0° |
H1'2 | C1' | C2' | C3' | 80.1° | 60.0° |
H1'2 | C1' | C2' | H2' | 163.2° | 180.0° |
O2' | C2' | C3' | H2' | 120.6° | 120.0° |
O2' | C2' | C3' | O3' | 65.0° | 180.0° |
O2' | C2' | C3' | C4' | 174.5° | 60.0° |
O2' | C2' | C3' | H3' | 53.9° | 60.0° |
C3' | C2' | O2' | HO2' | 58.1° | 60.0° |
C2' | C3' | O3' | C4' | 122.7° | 120.0° |
C2' | C3' | O3' | H3' | 118.3° | 120.0° |
C2' | C3' | C4' | H3' | 120.5° | 120.0° |
C2' | C3' | O3' | HO3' | 180.0° | 60.0° |
C2' | C3' | C4' | O4' | 43.5° | 60.0° |
C2' | C3' | C4' | C5' | 164.5° | 180.0° |
C2' | C3' | C4' | H4' | 80.5° | 60.0° |
H2' | C2' | O2' | HO2' | 62.0° | 180.0° |
H2' | C2' | C3' | O3' | 174.4° | 60.0° |
H2' | C2' | C3' | C4' | 53.9° | 60.0° |
H2' | C2' | C3' | H3' | 66.7° | 180.0° |
O3' | C3' | C4' | H3' | 119.5° | 120.0° |
O3' | C3' | C4' | O4' | 163.5° | 180.0° |
O3' | C3' | C4' | C5' | 75.6° | 60.0° |
O3' | C3' | C4' | H4' | 39.4° | 60.0° |
C4' | C3' | O3' | HO3' | 57.3° | 60.0° |
C3' | C4' | O4' | C5' | 117.5° | 119.9° |
C3' | C4' | O4' | H4' | 123.5° | 120.0° |
C3' | C4' | C5' | H4' | 114.6° | 120.0° |
C3' | C4' | O4' | HO4' | 149.1° | 60.0° |
C3' | C4' | C5' | O5' | 164.7° | 175.0° |
C3' | C4' | C5' | H5'1 | 44.7° | 55.0° |
C3' | C4' | C5' | H5'2 | 75.4° | 65.0° |
H3' | C3' | O3' | HO3' | 61.7° | 180.0° |
H3' | C3' | C4' | O4' | 77.0° | 60.0° |
H3' | C3' | C4' | C5' | 44.0° | 60.0° |
H3' | C3' | C4' | H4' | 159.0° | 180.0° |
O4' | C4' | C5' | H4' | 119.4° | 120.1° |
O4' | C4' | C5' | O5' | 69.2° | 65.1° |
O4' | C4' | C5' | H5'1 | 170.8° | 175.0° |
O4' | C4' | C5' | H5'2 | 50.7° | 55.0° |
C5' | C4' | O4' | HO4' | 31.6° | 60.0° |
C4' | C5' | O5' | H5'1 | 120.0° | 120.0° |
C4' | C5' | O5' | H5'2 | 119.9° | 120.1° |
C4' | C5' | H5'1 | H5'2 | 120.2° | 120.1° |
C4' | C5' | O5' | P | 105.1° | 180.0° |
H4' | C4' | O4' | HO4' | 87.4° | 180.0° |
H4' | C4' | C5' | O5' | 50.1° | 55.0° |
H4' | C4' | C5' | H5'1 | 69.8° | 64.9° |
H4' | C4' | C5' | H5'2 | 170.0° | 175.0° |
O5' | C5' | H5'1 | H5'2 | 120.2° | 120.0° |
C5' | O5' | P | O1P | 74.8° | 55.0° |
C5' | O5' | P | O2P | 47.7° | 174.9° |
C5' | O5' | P | O3P | 166.9° | 65.0° |
H5'1 | C5' | O5' | P | 135.0° | 60.0° |
H5'2 | C5' | O5' | P | 14.8° | 59.9° |
O5' | P | O1P | O2P | 114.3° | 120.0° |
O5' | P | O1P | O3P | 106.2° | 120.0° |
O5' | P | O2P | O3P | 107.1° | 120.0° |
O5' | P | O2P | HOP2 | 113.6° | 180.0° |
O5' | P | O3P | HOP3 | 109.1° | 60.0° |
O1P | P | O2P | O3P | 139.3° | 120.0° |
O1P | P | O2P | HOP2 | 0.0° | 60.0° |
O1P | P | O3P | HOP3 | 0.0° | 180.0° |
O2P | P | O3P | HOP3 | 140.0° | 60.0° |
O3P | P | O2P | HOP2 | 139.3° | 60.0° |