FMN
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N1 | C2 | sing | 1.33Å | 1.34Å | |
| N1 | C10 | doub | 1.32Å | 1.31Å | |
| C2 | O2 | doub | 1.22Å | 1.21Å | |
| C2 | N3 | sing | 1.34Å | 1.44Å | |
| N3 | C4 | sing | 1.35Å | 1.35Å | |
| N3 | HN3 | sing | 0.97Å | 1.00Å | |
| C4 | O4 | doub | 1.22Å | 1.24Å | |
| C4 | C4A | sing | 1.48Å | 1.47Å | |
| C4A | N5 | doub | 1.31Å | 1.32Å | |
| C4A | C10 | sing | 1.47Å | 1.47Å | |
| N5 | C5A | sing | 1.34Å | 1.34Å | |
| C5A | C6 | doub | 1.41Å | 1.46Å | Aromatic |
| C5A | C9A | sing | 1.41Å | 1.46Å | Aromatic |
| C6 | C7 | sing | 1.36Å | 1.36Å | Aromatic |
| C6 | H6 | sing | 1.08Å | 1.08Å | |
| C7 | C7M | sing | 1.51Å | 1.54Å | |
| C7 | C8 | doub | 1.39Å | 1.44Å | Aromatic |
| C7M | HM71 | sing | 1.09Å | 1.10Å | |
| C7M | HM72 | sing | 1.09Å | 1.10Å | |
| C7M | HM73 | sing | 1.09Å | 1.10Å | |
| C8 | C8M | sing | 1.51Å | 1.52Å | |
| C8 | C9 | sing | 1.38Å | 1.36Å | Aromatic |
| C8M | HM81 | sing | 1.09Å | 1.10Å | |
| C8M | HM82 | sing | 1.09Å | 1.10Å | |
| C8M | HM83 | sing | 1.09Å | 1.10Å | |
| C9 | C9A | doub | 1.39Å | 1.39Å | Aromatic |
| C9 | H9 | sing | 1.08Å | 1.08Å | |
| C9A | N10 | sing | 1.38Å | 1.40Å | |
| N10 | C10 | sing | 1.36Å | 1.36Å | |
| N10 | C1' | sing | 1.47Å | 1.49Å | |
| C1' | C2' | sing | 1.53Å | 1.54Å | |
| C1' | H1'1 | sing | 1.09Å | 1.10Å | |
| C1' | H1'2 | sing | 1.09Å | 1.10Å | |
| C2' | O2' | sing | 1.43Å | 1.44Å | |
| C2' | C3' | sing | 1.53Å | 1.54Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C3' | O3' | sing | 1.43Å | 1.48Å | |
| C3' | C4' | sing | 1.53Å | 1.51Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C4' | O4' | sing | 1.43Å | 1.45Å | |
| C4' | C5' | sing | 1.53Å | 1.52Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| O4' | HO4' | sing | 0.97Å | 0.95Å | |
| C5' | O5' | sing | 1.43Å | 1.45Å | |
| C5' | H5'1 | sing | 1.09Å | 1.10Å | |
| C5' | H5'2 | sing | 1.09Å | 1.10Å | |
| O5' | P | sing | 1.61Å | 1.60Å | |
| P | O1P | doub | 1.48Å | 1.51Å | |
| P | O2P | sing | 1.61Å | 1.53Å | |
| P | O3P | sing | 1.61Å | 1.53Å | |
| O2P | HOP2 | sing | 0.97Å | 0.95Å | |
| O3P | HOP3 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2 | N1 | C10 | 121.6° | 121.5° |
| N1 | C2 | O2 | 122.5° | 118.0° |
| N1 | C2 | N3 | 120.6° | 124.1° |
| N1 | C10 | C4A | 121.2° | 118.7° |
| N1 | C10 | N10 | 121.5° | 122.3° |
| O2 | C2 | N3 | 116.6° | 117.9° |
| C2 | N3 | C4 | 122.0° | 121.3° |
| C2 | N3 | HN3 | 119.0° | 119.5° |
| C4 | N3 | HN3 | 119.0° | 119.3° |
| N3 | C4 | O4 | 122.4° | 121.4° |
| N3 | C4 | C4A | 117.2° | 117.2° |
| O4 | C4 | C4A | 120.3° | 121.4° |
| C4 | C4A | N5 | 120.4° | 122.2° |
| C4 | C4A | C10 | 117.3° | 117.3° |
| N5 | C4A | C10 | 122.0° | 120.5° |
| C4A | N5 | C5A | 120.4° | 120.7° |
| C4A | C10 | N10 | 116.8° | 119.0° |
| N5 | C5A | C6 | 120.0° | 119.8° |
| N5 | C5A | C9A | 122.1° | 120.9° |
| C6 | C5A | C9A | 117.8° | 119.3° |
| C5A | C6 | C7 | 119.1° | 120.0° |
| C5A | C6 | H6 | 120.4° | 120.1° |
| C5A | C9A | C9 | 119.7° | 119.6° |
| C5A | C9A | N10 | 116.1° | 120.3° |
| C7 | C6 | H6 | 120.4° | 120.0° |
| C6 | C7 | C7M | 120.5° | 119.7° |
| C6 | C7 | C8 | 121.4° | 120.7° |
| C7M | C7 | C8 | 118.1° | 119.7° |
| C7 | C7M | HM71 | 109.5° | 109.5° |
| C7 | C7M | HM72 | 109.5° | 109.5° |
| C7 | C7M | HM73 | 109.5° | 109.5° |
| C7 | C8 | C8M | 122.8° | 119.7° |
| C7 | C8 | C9 | 119.6° | 120.7° |
| HM71 | C7M | HM72 | 109.5° | 109.5° |
| HM71 | C7M | HM73 | 109.4° | 109.4° |
| HM72 | C7M | HM73 | 109.5° | 109.4° |
| C8M | C8 | C9 | 117.5° | 119.7° |
| C8 | C8M | HM81 | 109.5° | 109.5° |
| C8 | C8M | HM82 | 109.5° | 109.5° |
| C8 | C8M | HM83 | 109.5° | 109.5° |
| C8 | C9 | C9A | 121.7° | 119.8° |
| C8 | C9 | H9 | 119.2° | 120.1° |
| HM81 | C8M | HM82 | 109.5° | 109.5° |
| HM81 | C8M | HM83 | 109.5° | 109.5° |
| HM82 | C8M | HM83 | 109.4° | 109.5° |
| C9A | C9 | H9 | 119.1° | 120.1° |
| C9 | C9A | N10 | 124.2° | 120.1° |
| C9A | N10 | C10 | 122.5° | 118.5° |
| C9A | N10 | C1' | 121.2° | 120.7° |
| C10 | N10 | C1' | 116.3° | 120.8° |
| N10 | C1' | C2' | 107.2° | 109.5° |
| N10 | C1' | H1'1 | 110.1° | 109.4° |
| N10 | C1' | H1'2 | 110.0° | 109.5° |
| C2' | C1' | H1'1 | 110.0° | 109.5° |
| C2' | C1' | H1'2 | 110.1° | 109.5° |
| C1' | C2' | O2' | 108.0° | 109.5° |
| C1' | C2' | C3' | 111.3° | 109.5° |
| C1' | C2' | H2' | 109.7° | 109.5° |
| H1'1 | C1' | H1'2 | 109.5° | 109.5° |
| O2' | C2' | C3' | 107.0° | 109.5° |
| O2' | C2' | H2' | 111.0° | 109.5° |
| C2' | O2' | HO2' | 109.5° | 114.0° |
| C3' | C2' | H2' | 109.7° | 109.4° |
| C2' | C3' | O3' | 108.8° | 109.4° |
| C2' | C3' | C4' | 113.2° | 109.5° |
| C2' | C3' | H3' | 108.8° | 109.4° |
| O3' | C3' | C4' | 107.3° | 109.5° |
| O3' | C3' | H3' | 109.6° | 109.4° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C4' | C3' | H3' | 109.2° | 109.5° |
| C3' | C4' | O4' | 109.9° | 109.5° |
| C3' | C4' | C5' | 110.0° | 109.4° |
| C3' | C4' | H4' | 109.5° | 109.5° |
| O4' | C4' | C5' | 107.7° | 109.5° |
| O4' | C4' | H4' | 110.4° | 109.4° |
| C4' | O4' | HO4' | 109.5° | 114.0° |
| C5' | C4' | H4' | 109.4° | 109.5° |
| C4' | C5' | O5' | 110.0° | 109.4° |
| C4' | C5' | H5'1 | 109.4° | 109.5° |
| C4' | C5' | H5'2 | 109.4° | 109.5° |
| O5' | C5' | H5'1 | 109.4° | 109.5° |
| O5' | C5' | H5'2 | 109.4° | 109.4° |
| C5' | O5' | P | 121.9° | 123.0° |
| H5'1 | C5' | H5'2 | 109.4° | 109.5° |
| O5' | P | O1P | 105.0° | 109.5° |
| O5' | P | O2P | 106.7° | 109.5° |
| O5' | P | O3P | 104.8° | 109.5° |
| O1P | P | O2P | 111.8° | 109.4° |
| O1P | P | O3P | 115.6° | 109.5° |
| O2P | P | O3P | 112.0° | 109.5° |
| P | O2P | HOP2 | 109.5° | 114.0° |
| P | O3P | HOP3 | 109.5° | 114.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N1 | C2 | O2 | N3 | 174.1° | 180.0° |
| N1 | C2 | N3 | C4 | 0.7° | 0.0° |
| N1 | C2 | N3 | HN3 | 179.3° | 180.0° |
| C2 | N1 | C10 | C4A | 2.7° | 0.1° |
| C2 | N1 | C10 | N10 | 174.1° | 180.0° |
| C10 | N1 | C2 | O2 | 170.8° | 180.0° |
| C10 | N1 | C2 | N3 | 3.0° | 0.0° |
| N1 | C10 | C4A | C4 | 0.2° | 0.0° |
| N1 | C10 | C4A | N5 | 173.1° | 180.0° |
| N1 | C10 | C4A | N10 | 171.8° | 180.0° |
| N1 | C10 | N10 | C9A | 172.3° | 180.0° |
| N1 | C10 | N10 | C1' | 4.4° | 0.0° |
| O2 | C2 | N3 | C4 | 173.5° | 179.9° |
| O2 | C2 | N3 | HN3 | 6.5° | 0.0° |
| C2 | N3 | C4 | HN3 | 180.0° | 179.9° |
| C2 | N3 | C4 | O4 | 178.2° | 180.0° |
| C2 | N3 | C4 | C4A | 1.7° | 0.1° |
| N3 | C4 | O4 | C4A | 176.4° | 179.9° |
| N3 | C4 | C4A | N5 | 175.3° | 179.9° |
| N3 | C4 | C4A | C10 | 1.9° | 0.1° |
| HN3 | N3 | C4 | O4 | 1.8° | 0.1° |
| HN3 | N3 | C4 | C4A | 178.3° | 180.0° |
| O4 | C4 | C4A | N5 | 8.1° | 0.0° |
| O4 | C4 | C4A | C10 | 178.5° | 180.0° |
| C4 | C4A | N5 | C10 | 173.1° | 180.0° |
| C4 | C4A | N5 | C5A | 173.4° | 180.0° |
| C4 | C4A | C10 | N10 | 172.0° | 180.0° |
| C4A | N5 | C5A | C6 | 178.7° | 180.0° |
| C4A | N5 | C5A | C9A | 2.6° | 0.0° |
| N5 | C4A | C10 | N10 | 1.3° | 0.0° |
| C10 | C4A | N5 | C5A | 0.3° | 0.0° |
| C4A | C10 | N10 | C9A | 0.5° | 0.0° |
| C4A | C10 | N10 | C1' | 176.2° | 180.0° |
| N5 | C5A | C6 | C9A | 176.2° | 180.0° |
| N5 | C5A | C6 | C7 | 171.6° | 180.0° |
| N5 | C5A | C6 | H6 | 8.4° | 0.1° |
| N5 | C5A | C9A | C9 | 179.0° | 179.9° |
| N5 | C5A | C9A | N10 | 3.2° | 0.0° |
| C5A | C6 | C7 | H6 | 180.0° | 179.9° |
| C5A | C6 | C7 | C7M | 172.9° | 180.0° |
| C5A | C6 | C7 | C8 | 9.1° | 0.0° |
| C6 | C5A | C9A | C9 | 2.8° | 0.1° |
| C6 | C5A | C9A | N10 | 179.4° | 180.0° |
| C9A | C5A | C6 | C7 | 4.6° | 0.0° |
| C9A | C5A | C6 | H6 | 175.4° | 179.9° |
| C5A | C9A | C9 | C8 | 6.0° | 0.1° |
| C5A | C9A | C9 | N10 | 177.6° | 179.9° |
| C5A | C9A | C9 | H9 | 174.0° | 180.0° |
| C5A | C9A | N10 | C10 | 1.6° | 0.0° |
| C5A | C9A | N10 | C1' | 178.1° | 180.0° |
| C6 | C7 | C7M | C8 | 178.0° | 180.0° |
| C6 | C7 | C7M | HM71 | 91.0° | 90.0° |
| C6 | C7 | C7M | HM72 | 149.0° | 150.0° |
| C6 | C7 | C7M | HM73 | 29.0° | 30.0° |
| C6 | C7 | C8 | C8M | 171.2° | 179.9° |
| C6 | C7 | C8 | C9 | 6.2° | 0.0° |
| H6 | C6 | C7 | C7M | 7.1° | 0.1° |
| H6 | C6 | C7 | C8 | 170.9° | 179.9° |
| C7 | C7M | HM71 | HM72 | 120.0° | 120.0° |
| C7 | C7M | HM71 | HM73 | 120.0° | 120.0° |
| C7 | C7M | HM72 | HM73 | 120.0° | 120.1° |
| C7M | C7 | C8 | C8M | 6.8° | 0.0° |
| C7M | C7 | C8 | C9 | 175.8° | 179.9° |
| C8 | C7 | C7M | HM71 | 91.0° | 90.0° |
| C8 | C7 | C7M | HM72 | 29.1° | 30.0° |
| C8 | C7 | C7M | HM73 | 149.1° | 150.0° |
| C7 | C8 | C8M | C9 | 177.4° | 179.9° |
| C7 | C8 | C8M | HM81 | 91.4° | 90.0° |
| C7 | C8 | C8M | HM82 | 148.6° | 150.0° |
| C7 | C8 | C8M | HM83 | 28.6° | 30.0° |
| C7 | C8 | C9 | C9A | 1.7° | 0.1° |
| C7 | C8 | C9 | H9 | 178.3° | 179.9° |
| HM71 | C7M | HM72 | HM73 | 120.0° | 119.9° |
| C8 | C8M | HM81 | HM82 | 120.0° | 120.0° |
| C8 | C8M | HM81 | HM83 | 120.0° | 120.0° |
| C8 | C8M | HM82 | HM83 | 120.0° | 120.0° |
| C8M | C8 | C9 | C9A | 179.2° | 180.0° |
| C8M | C8 | C9 | H9 | 0.8° | 0.2° |
| C9 | C8 | C8M | HM81 | 91.2° | 89.9° |
| C9 | C8 | C8M | HM82 | 28.9° | 30.1° |
| C9 | C8 | C8M | HM83 | 148.8° | 150.1° |
| C8 | C9 | C9A | H9 | 180.0° | 179.8° |
| C8 | C9 | C9A | N10 | 176.4° | 180.0° |
| HM81 | C8M | HM82 | HM83 | 120.0° | 120.0° |
| C9 | C9A | N10 | C10 | 179.3° | 179.9° |
| C9 | C9A | N10 | C1' | 4.2° | 0.1° |
| H9 | C9 | C9A | N10 | 3.6° | 0.1° |
| C9A | N10 | C10 | C1' | 176.7° | 180.0° |
| C9A | N10 | C1' | C2' | 98.8° | 90.0° |
| C9A | N10 | C1' | H1'1 | 141.5° | 150.0° |
| C9A | N10 | C1' | H1'2 | 20.8° | 30.0° |
| C10 | N10 | C1' | C2' | 77.9° | 90.0° |
| C10 | N10 | C1' | H1'1 | 41.8° | 30.0° |
| C10 | N10 | C1' | H1'2 | 162.5° | 150.0° |
| N10 | C1' | C2' | H1'1 | 119.6° | 119.9° |
| N10 | C1' | C2' | H1'2 | 119.6° | 120.0° |
| N10 | C1' | H1'1 | H1'2 | 121.0° | 120.0° |
| N10 | C1' | C2' | O2' | 72.8° | 60.0° |
| N10 | C1' | C2' | C3' | 169.9° | 180.0° |
| N10 | C1' | C2' | H2' | 48.3° | 60.0° |
| C2' | C1' | H1'1 | H1'2 | 121.1° | 120.0° |
| C1' | C2' | O2' | C3' | 120.0° | 120.0° |
| C1' | C2' | O2' | H2' | 120.3° | 120.0° |
| C1' | C2' | C3' | H2' | 121.6° | 120.0° |
| C1' | C2' | O2' | HO2' | 180.0° | 60.0° |
| C1' | C2' | C3' | O3' | 59.9° | 60.0° |
| C1' | C2' | C3' | C4' | 59.2° | 180.0° |
| C1' | C2' | C3' | H3' | 179.3° | 60.0° |
| H1'1 | C1' | C2' | O2' | 167.5° | 179.9° |
| H1'1 | C1' | C2' | C3' | 50.3° | 60.0° |
| H1'1 | C1' | C2' | H2' | 71.3° | 60.0° |
| H1'2 | C1' | C2' | O2' | 46.8° | 60.0° |
| H1'2 | C1' | C2' | C3' | 70.4° | 60.0° |
| H1'2 | C1' | C2' | H2' | 168.0° | 180.0° |
| O2' | C2' | C3' | H2' | 120.6° | 120.0° |
| O2' | C2' | C3' | O3' | 57.9° | 180.0° |
| O2' | C2' | C3' | C4' | 177.0° | 60.0° |
| O2' | C2' | C3' | H3' | 61.4° | 60.1° |
| C3' | C2' | O2' | HO2' | 60.0° | 60.0° |
| C2' | C3' | O3' | C4' | 122.8° | 120.0° |
| C2' | C3' | O3' | H3' | 118.9° | 119.9° |
| C2' | C3' | C4' | H3' | 121.3° | 120.0° |
| C2' | C3' | O3' | HO3' | 180.0° | 60.1° |
| C2' | C3' | C4' | O4' | 44.5° | 60.0° |
| C2' | C3' | C4' | C5' | 162.9° | 180.0° |
| C2' | C3' | C4' | H4' | 76.9° | 60.0° |
| H2' | C2' | O2' | HO2' | 59.7° | 180.0° |
| H2' | C2' | C3' | O3' | 178.5° | 60.0° |
| H2' | C2' | C3' | C4' | 62.4° | 60.0° |
| H2' | C2' | C3' | H3' | 59.1° | 180.0° |
| O3' | C3' | C4' | H3' | 118.7° | 120.0° |
| O3' | C3' | C4' | O4' | 164.5° | 180.0° |
| O3' | C3' | C4' | C5' | 77.1° | 60.0° |
| O3' | C3' | C4' | H4' | 43.1° | 60.0° |
| C4' | C3' | O3' | HO3' | 57.2° | 59.9° |
| C3' | C4' | O4' | C5' | 119.8° | 120.0° |
| C3' | C4' | O4' | H4' | 120.8° | 120.0° |
| C3' | C4' | C5' | H4' | 120.3° | 120.0° |
| C3' | C4' | O4' | HO4' | 180.0° | 60.0° |
| C3' | C4' | C5' | O5' | 64.8° | 175.0° |
| C3' | C4' | C5' | H5'1 | 175.1° | 55.0° |
| C3' | C4' | C5' | H5'2 | 55.3° | 65.1° |
| H3' | C3' | O3' | HO3' | 61.2° | 180.0° |
| H3' | C3' | C4' | O4' | 76.8° | 60.0° |
| H3' | C3' | C4' | C5' | 41.6° | 60.0° |
| H3' | C3' | C4' | H4' | 161.8° | 180.0° |
| O4' | C4' | C5' | H4' | 120.0° | 120.0° |
| O4' | C4' | C5' | O5' | 54.9° | 65.0° |
| O4' | C4' | C5' | H5'1 | 65.2° | 175.0° |
| O4' | C4' | C5' | H5'2 | 175.0° | 54.9° |
| C5' | C4' | O4' | HO4' | 60.2° | 60.0° |
| C4' | C5' | O5' | H5'1 | 120.1° | 120.0° |
| C4' | C5' | O5' | H5'2 | 120.1° | 119.9° |
| C4' | C5' | H5'1 | H5'2 | 119.8° | 120.0° |
| C4' | C5' | O5' | P | 164.9° | 180.0° |
| H4' | C4' | O4' | HO4' | 59.2° | 179.9° |
| H4' | C4' | C5' | O5' | 174.9° | 55.0° |
| H4' | C4' | C5' | H5'1 | 54.8° | 65.0° |
| H4' | C4' | C5' | H5'2 | 65.0° | 174.9° |
| O5' | C5' | H5'1 | H5'2 | 119.8° | 120.0° |
| C5' | O5' | P | O1P | 60.7° | 55.0° |
| C5' | O5' | P | O2P | 58.1° | 175.0° |
| C5' | O5' | P | O3P | 177.0° | 65.0° |
| H5'1 | C5' | O5' | P | 75.0° | 60.0° |
| H5'2 | C5' | O5' | P | 44.8° | 60.1° |
| O5' | P | O1P | O2P | 115.3° | 120.0° |
| O5' | P | O1P | O3P | 115.0° | 120.0° |
| O5' | P | O2P | O3P | 114.2° | 120.0° |
| O5' | P | O2P | HOP2 | 114.2° | 180.0° |
| O5' | P | O3P | HOP3 | 115.1° | 60.0° |
| O1P | P | O2P | O3P | 131.6° | 120.0° |
| O1P | P | O2P | HOP2 | 0.0° | 60.0° |
| O1P | P | O3P | HOP3 | 0.0° | 180.0° |
| O2P | P | O3P | HOP3 | 129.6° | 60.0° |
| O3P | P | O2P | HOP2 | 131.6° | 60.0° |
