FM2
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | C2 | doub | 1.32Å | 1.41Å | Aromatic |
N1 | C6 | sing | 1.33Å | 1.45Å | Aromatic |
N1 | C11 | sing | 1.46Å | 1.43Å | |
C2 | N3 | sing | 1.31Å | 1.36Å | Aromatic |
C2 | H2 | sing | 1.08Å | 1.10Å | |
N3 | C4 | doub | 1.34Å | 1.40Å | Aromatic |
C4 | C5 | sing | 1.41Å | 1.41Å | Aromatic |
C4 | C9 | sing | 1.41Å | 1.39Å | Aromatic |
C5 | C6 | doub | 1.40Å | 1.44Å | Aromatic |
C5 | N7 | sing | 1.37Å | 1.38Å | Aromatic |
C6 | N6 | sing | 1.38Å | 1.26Å | |
N6 | HN61 | sing | 0.97Å | 1.02Å | |
N6 | HN62 | sing | 0.97Å | 1.02Å | |
N7 | N8 | sing | 1.40Å | 1.31Å | Aromatic |
N7 | H7 | sing | 0.97Å | 1.02Å | |
N8 | C9 | doub | 1.30Å | 1.38Å | Aromatic |
C9 | C1' | sing | 1.51Å | 1.54Å | |
C1' | C2' | sing | 1.54Å | 1.56Å | |
C1' | O4' | sing | 1.44Å | 1.44Å | |
C1' | H1' | sing | 1.09Å | 1.11Å | |
C2' | O2' | sing | 1.43Å | 1.42Å | |
C2' | C3' | sing | 1.55Å | 1.57Å | |
C2' | H2' | sing | 1.09Å | 1.11Å | |
O2' | HO2' | sing | 0.97Å | 0.95Å | |
C3' | O3' | sing | 1.43Å | 1.44Å | |
C3' | C4' | sing | 1.55Å | 1.51Å | |
C3' | H3' | sing | 1.09Å | 1.12Å | |
O3' | HO3' | sing | 0.97Å | 0.95Å | |
C4' | O4' | sing | 1.44Å | 1.47Å | |
C4' | C5' | sing | 1.53Å | 1.57Å | |
C4' | H4' | sing | 1.09Å | 1.12Å | |
C5' | O5' | sing | 1.43Å | 1.43Å | |
C5' | H5'1 | sing | 1.09Å | 1.12Å | |
C5' | H5'2 | sing | 1.09Å | 1.11Å | |
O5' | HO5' | sing | 0.97Å | 0.95Å | |
C11 | H111 | sing | 1.09Å | 1.12Å | |
C11 | H112 | sing | 1.09Å | 1.12Å | |
C11 | H113 | sing | 1.09Å | 1.12Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | N1 | C6 | 125.4° | 121.3° |
C2 | N1 | C11 | 115.5° | 119.4° |
N1 | C2 | N3 | 121.9° | 122.5° |
N1 | C2 | H2 | 121.0° | 118.7° |
C6 | N1 | C11 | 119.0° | 119.4° |
N1 | C6 | C5 | 112.4° | 118.5° |
N1 | C6 | N6 | 120.9° | 120.7° |
N1 | C11 | H111 | 110.0° | 109.5° |
N1 | C11 | H112 | 115.6° | 109.5° |
N1 | C11 | H113 | 110.0° | 109.5° |
N3 | C2 | H2 | 117.1° | 118.7° |
C2 | N3 | C4 | 113.4° | 120.6° |
N3 | C4 | C5 | 128.4° | 118.8° |
N3 | C4 | C9 | 126.2° | 134.4° |
C5 | C4 | C9 | 105.4° | 106.8° |
C4 | C5 | C6 | 118.5° | 118.4° |
C4 | C5 | N7 | 110.6° | 106.8° |
C4 | C9 | N8 | 104.8° | 108.7° |
C4 | C9 | C1' | 137.9° | 125.6° |
C6 | C5 | N7 | 130.9° | 134.8° |
C5 | C6 | N6 | 126.6° | 120.8° |
C5 | N7 | N8 | 104.3° | 108.0° |
C5 | N7 | H7 | 129.9° | 126.1° |
C6 | N6 | HN61 | 108.1° | 120.0° |
C6 | N6 | HN62 | 120.9° | 120.0° |
HN61 | N6 | HN62 | 108.1° | 120.0° |
N8 | N7 | H7 | 125.8° | 126.0° |
N7 | N8 | C9 | 114.9° | 109.6° |
N8 | C9 | C1' | 117.3° | 125.6° |
C9 | C1' | C2' | 116.9° | 110.4° |
C9 | C1' | O4' | 106.0° | 110.4° |
C9 | C1' | H1' | 106.1° | 110.3° |
C2' | C1' | O4' | 106.6° | 104.9° |
C2' | C1' | H1' | 105.4° | 110.3° |
C1' | C2' | O2' | 110.0° | 110.8° |
C1' | C2' | C3' | 103.5° | 104.0° |
C1' | C2' | H2' | 114.8° | 110.4° |
O4' | C1' | H1' | 116.4° | 110.4° |
C1' | O4' | C4' | 110.4° | 105.3° |
O2' | C2' | C3' | 114.2° | 110.6° |
O2' | C2' | H2' | 104.1° | 110.4° |
C2' | O2' | HO2' | 110.0° | 106.8° |
C3' | C2' | H2' | 110.6° | 110.5° |
C2' | C3' | O3' | 113.7° | 110.5° |
C2' | C3' | C4' | 105.5° | 104.1° |
C2' | C3' | H3' | 109.8° | 110.6° |
O3' | C3' | C4' | 110.8° | 110.5° |
O3' | C3' | H3' | 104.4° | 110.5° |
C3' | O3' | HO3' | 113.7° | 106.8° |
C4' | C3' | H3' | 112.8° | 110.5° |
C3' | C4' | O4' | 103.8° | 104.8° |
C3' | C4' | C5' | 112.3° | 110.5° |
C3' | C4' | H4' | 112.3° | 110.4° |
O4' | C4' | C5' | 112.0° | 110.4° |
O4' | C4' | H4' | 112.6° | 110.4° |
C5' | C4' | H4' | 104.1° | 110.3° |
C4' | C5' | O5' | 111.4° | 109.4° |
C4' | C5' | H5'1 | 111.5° | 109.5° |
C4' | C5' | H5'2 | 111.5° | 109.5° |
O5' | C5' | H5'1 | 111.5° | 109.5° |
O5' | C5' | H5'2 | 111.5° | 109.5° |
C5' | O5' | HO5' | 111.4° | 106.8° |
H5'1 | C5' | H5'2 | 98.9° | 109.4° |
H111 | C11 | H112 | 110.0° | 109.4° |
H111 | C11 | H113 | 100.2° | 109.4° |
H112 | C11 | H113 | 110.0° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | N1 | C6 | C11 | 176.0° | 179.8° |
N1 | C2 | N3 | H2 | 180.0° | 179.9° |
N1 | C2 | N3 | C4 | 0.8° | 0.1° |
C2 | N1 | C6 | C5 | 0.7° | 0.5° |
C2 | N1 | C6 | N6 | 179.9° | 180.0° |
C2 | N1 | C11 | H111 | 54.7° | 90.0° |
C2 | N1 | C11 | H112 | 180.0° | 150.1° |
C2 | N1 | C11 | H113 | 54.7° | 30.0° |
C6 | N1 | C2 | N3 | 1.3° | 0.2° |
C6 | N1 | C2 | H2 | 178.7° | 179.7° |
N1 | C6 | C5 | C4 | 0.3° | 0.5° |
N1 | C6 | C5 | N6 | 179.4° | 179.5° |
N1 | C6 | C5 | N7 | 179.6° | 179.8° |
N1 | C6 | N6 | HN61 | 54.7° | 179.5° |
N1 | C6 | N6 | HN62 | 180.0° | 0.5° |
C6 | N1 | C11 | H111 | 128.8° | 90.3° |
C6 | N1 | C11 | H112 | 3.6° | 29.7° |
C6 | N1 | C11 | H113 | 121.7° | 149.8° |
C11 | N1 | C2 | N3 | 174.9° | 180.0° |
C11 | N1 | C2 | H2 | 5.1° | 0.1° |
C11 | N1 | C6 | C5 | 175.4° | 179.8° |
C11 | N1 | C6 | N6 | 4.1° | 0.2° |
N1 | C11 | H111 | H112 | 128.4° | 120.0° |
N1 | C11 | H111 | H113 | 115.8° | 120.1° |
N1 | C11 | H112 | H113 | 125.2° | 120.1° |
C2 | N3 | C4 | C5 | 0.2° | 0.1° |
C2 | N3 | C4 | C9 | 179.1° | 180.0° |
H2 | C2 | N3 | C4 | 179.2° | 180.0° |
N3 | C4 | C5 | C9 | 179.4° | 179.9° |
N3 | C4 | C5 | C6 | 0.8° | 0.2° |
N3 | C4 | C5 | N7 | 179.8° | 180.0° |
N3 | C4 | C9 | N8 | 179.8° | 180.0° |
N3 | C4 | C9 | C1' | 1.3° | 0.1° |
C4 | C5 | C6 | N7 | 179.3° | 179.7° |
C4 | C5 | C6 | N6 | 179.1° | 180.0° |
C4 | C5 | N7 | N8 | 0.5° | 0.0° |
C4 | C5 | N7 | H7 | 179.5° | 180.0° |
C5 | C4 | C9 | N8 | 0.8° | 0.0° |
C5 | C4 | C9 | C1' | 178.1° | 180.0° |
C9 | C4 | C5 | C6 | 178.6° | 179.7° |
C9 | C4 | C5 | N7 | 0.9° | 0.0° |
C4 | C9 | N8 | N7 | 0.6° | 0.0° |
C4 | C9 | N8 | C1' | 179.2° | 180.0° |
C4 | C9 | C1' | C2' | 0.5° | 106.5° |
C4 | C9 | C1' | O4' | 119.1° | 137.9° |
C4 | C9 | C1' | H1' | 116.6° | 15.7° |
C5 | C6 | N6 | HN61 | 125.9° | 0.0° |
C5 | C6 | N6 | HN62 | 0.7° | 180.0° |
C6 | C5 | N7 | N8 | 178.9° | 179.7° |
C6 | C5 | N7 | H7 | 1.1° | 0.3° |
N7 | C5 | C6 | N6 | 0.2° | 0.3° |
C5 | N7 | N8 | H7 | 180.0° | 180.0° |
C5 | N7 | N8 | C9 | 0.0° | 0.0° |
C6 | N6 | HN61 | HN62 | 132.5° | 180.0° |
N7 | N8 | C9 | C1' | 178.7° | 180.0° |
H7 | N7 | N8 | C9 | 180.0° | 180.0° |
N8 | C9 | C1' | C2' | 178.4° | 73.5° |
N8 | C9 | C1' | O4' | 59.8° | 42.0° |
N8 | C9 | C1' | H1' | 64.5° | 164.3° |
C9 | C1' | C2' | O4' | 118.2° | 118.9° |
C9 | C1' | C2' | H1' | 117.5° | 122.2° |
C9 | C1' | O4' | H1' | 117.6° | 122.2° |
C9 | C1' | C2' | O2' | 120.2° | 98.5° |
C9 | C1' | C2' | C3' | 117.4° | 142.7° |
C9 | C1' | C2' | H2' | 3.2° | 24.2° |
C9 | C1' | O4' | C4' | 104.4° | 159.4° |
C2' | C1' | O4' | H1' | 117.2° | 118.8° |
C1' | C2' | O2' | C3' | 115.8° | 114.8° |
C1' | C2' | O2' | H2' | 123.5° | 122.6° |
C1' | C2' | C3' | H2' | 123.4° | 118.5° |
C1' | C2' | O2' | HO2' | 180.0° | 176.2° |
C1' | C2' | C3' | O3' | 103.4° | 118.8° |
C1' | C2' | C3' | C4' | 18.2° | 0.2° |
C1' | C2' | C3' | H3' | 140.0° | 118.5° |
C2' | C1' | O4' | C4' | 20.7° | 40.4° |
O4' | C1' | C2' | O2' | 121.6° | 142.6° |
O4' | C1' | C2' | C3' | 0.8° | 23.8° |
O4' | C1' | C2' | H2' | 121.4° | 94.7° |
C1' | O4' | C4' | C3' | 32.4° | 40.5° |
C1' | O4' | C4' | C5' | 88.9° | 159.4° |
C1' | O4' | C4' | H4' | 154.2° | 78.3° |
H1' | C1' | C2' | O2' | 2.7° | 23.7° |
H1' | C1' | C2' | C3' | 125.1° | 95.1° |
H1' | C1' | C2' | H2' | 114.3° | 146.4° |
H1' | C1' | O4' | C4' | 138.0° | 78.4° |
O2' | C2' | C3' | H2' | 117.1° | 122.6° |
O2' | C2' | C3' | O3' | 16.1° | 0.2° |
O2' | C2' | C3' | C4' | 137.7° | 118.8° |
O2' | C2' | C3' | H3' | 100.4° | 122.5° |
C3' | C2' | O2' | HO2' | 64.2° | 61.4° |
C2' | C3' | O3' | C4' | 118.6° | 114.7° |
C2' | C3' | O3' | H3' | 119.7° | 122.7° |
C2' | C3' | C4' | H3' | 119.9° | 118.8° |
C2' | C3' | O3' | HO3' | 180.0° | 176.1° |
C2' | C3' | C4' | O4' | 30.3° | 24.1° |
C2' | C3' | C4' | C5' | 90.8° | 143.0° |
C2' | C3' | C4' | H4' | 152.2° | 94.7° |
H2' | C2' | O2' | HO2' | 56.5° | 61.2° |
H2' | C2' | C3' | O3' | 133.2° | 122.7° |
H2' | C2' | C3' | C4' | 105.2° | 118.6° |
H2' | C2' | C3' | H3' | 16.6° | 0.1° |
O3' | C3' | C4' | H3' | 116.7° | 122.6° |
O3' | C3' | C4' | O4' | 93.2° | 142.8° |
O3' | C3' | C4' | C5' | 145.7° | 98.4° |
O3' | C3' | C4' | H4' | 28.7° | 24.0° |
C4' | C3' | O3' | HO3' | 61.4° | 61.4° |
C3' | C4' | O4' | C5' | 121.3° | 118.9° |
C3' | C4' | O4' | H4' | 121.7° | 118.8° |
C3' | C4' | C5' | H4' | 121.8° | 122.3° |
C3' | C4' | C5' | O5' | 160.7° | 178.1° |
C3' | C4' | C5' | H5'1 | 35.4° | 58.1° |
C3' | C4' | C5' | H5'2 | 74.1° | 61.9° |
H3' | C3' | O3' | HO3' | 60.3° | 61.1° |
H3' | C3' | C4' | O4' | 150.1° | 94.7° |
H3' | C3' | C4' | C5' | 29.0° | 24.2° |
H3' | C3' | C4' | H4' | 88.0° | 146.5° |
O4' | C4' | C5' | H4' | 122.0° | 122.3° |
O4' | C4' | C5' | O5' | 44.4° | 66.5° |
O4' | C4' | C5' | H5'1 | 80.9° | 173.5° |
O4' | C4' | C5' | H5'2 | 169.6° | 53.6° |
C4' | C5' | O5' | H5'1 | 125.3° | 120.0° |
C4' | C5' | O5' | H5'2 | 125.3° | 120.0° |
C4' | C5' | H5'1 | H5'2 | 117.4° | 120.0° |
C4' | C5' | O5' | HO5' | 180.0° | 180.0° |
H4' | C4' | C5' | O5' | 77.6° | 55.8° |
H4' | C4' | C5' | H5'1 | 157.1° | 64.2° |
H4' | C4' | C5' | H5'2 | 47.7° | 175.8° |
O5' | C5' | H5'1 | H5'2 | 117.4° | 120.0° |
H5'1 | C5' | O5' | HO5' | 54.7° | 60.0° |
H5'2 | C5' | O5' | HO5' | 54.7° | 60.0° |
H111 | C11 | H112 | H113 | 109.5° | 119.9° |