FM1
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | C2 | doub | 1.32Å | 1.41Å | Aromatic |
N1 | C6 | sing | 1.33Å | 1.45Å | Aromatic |
C2 | N3 | sing | 1.31Å | 1.37Å | Aromatic |
C2 | H2 | sing | 1.08Å | 1.10Å | |
N3 | C4 | doub | 1.34Å | 1.39Å | Aromatic |
C4 | C5 | sing | 1.41Å | 1.41Å | Aromatic |
C4 | C9 | sing | 1.41Å | 1.38Å | Aromatic |
C5 | C6 | doub | 1.40Å | 1.43Å | Aromatic |
C5 | N7 | sing | 1.37Å | 1.39Å | Aromatic |
C6 | N6 | sing | 1.38Å | 1.27Å | |
N6 | C66 | sing | 1.47Å | 1.44Å | |
N6 | HN61 | sing | 0.97Å | 1.02Å | |
N7 | N8 | sing | 1.40Å | 1.31Å | Aromatic |
N7 | H7 | sing | 0.97Å | 1.02Å | |
N8 | C9 | doub | 1.30Å | 1.39Å | Aromatic |
C9 | C1' | sing | 1.51Å | 1.54Å | |
C1' | C2' | sing | 1.54Å | 1.55Å | |
C1' | O4' | sing | 1.44Å | 1.44Å | |
C1' | H1' | sing | 1.09Å | 1.12Å | |
C2' | O2' | sing | 1.43Å | 1.41Å | |
C2' | C3' | sing | 1.55Å | 1.55Å | |
C2' | H2' | sing | 1.09Å | 1.12Å | |
O2' | HO2' | sing | 0.97Å | 0.95Å | |
C3' | O3' | sing | 1.43Å | 1.44Å | |
C3' | C4' | sing | 1.54Å | 1.49Å | |
C3' | H3' | sing | 1.09Å | 1.12Å | |
O3' | HO3' | sing | 0.97Å | 0.95Å | |
C4' | O4' | sing | 1.44Å | 1.49Å | |
C4' | C5' | sing | 1.53Å | 1.55Å | |
C4' | H4' | sing | 1.09Å | 1.12Å | |
C5' | O5' | sing | 1.43Å | 1.40Å | |
C5' | H5'1 | sing | 1.09Å | 1.11Å | |
C5' | H5'2 | sing | 1.09Å | 1.11Å | |
O5' | HO5' | sing | 0.97Å | 0.95Å | |
C66 | H661 | sing | 1.09Å | 1.12Å | |
C66 | H662 | sing | 1.09Å | 1.11Å | |
C66 | H663 | sing | 1.09Å | 1.12Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | N1 | C6 | 125.2° | 121.2° |
N1 | C2 | N3 | 121.7° | 122.6° |
N1 | C2 | H2 | 120.9° | 118.7° |
N1 | C6 | C5 | 112.5° | 118.5° |
N1 | C6 | N6 | 121.2° | 120.7° |
N3 | C2 | H2 | 117.4° | 118.7° |
C2 | N3 | C4 | 113.6° | 120.6° |
N3 | C4 | C5 | 128.6° | 118.7° |
N3 | C4 | C9 | 125.7° | 134.3° |
C5 | C4 | C9 | 105.7° | 107.0° |
C4 | C5 | C6 | 118.4° | 118.4° |
C4 | C5 | N7 | 110.9° | 106.7° |
C4 | C9 | N8 | 104.9° | 108.7° |
C4 | C9 | C1' | 137.5° | 125.7° |
C6 | C5 | N7 | 130.7° | 134.9° |
C5 | C6 | N6 | 126.3° | 120.7° |
C5 | N7 | N8 | 103.2° | 108.0° |
C5 | N7 | H7 | 130.5° | 126.0° |
C6 | N6 | C66 | 117.0° | 120.0° |
C6 | N6 | HN61 | 109.5° | 120.0° |
C66 | N6 | HN61 | 109.5° | 119.9° |
N6 | C66 | H661 | 109.5° | 109.5° |
N6 | C66 | H662 | 117.0° | 109.5° |
N6 | C66 | H663 | 109.5° | 109.4° |
N8 | N7 | H7 | 126.3° | 126.0° |
N7 | N8 | C9 | 115.3° | 109.6° |
N8 | C9 | C1' | 117.6° | 125.6° |
C9 | C1' | C2' | 116.6° | 110.4° |
C9 | C1' | O4' | 106.0° | 110.4° |
C9 | C1' | H1' | 105.8° | 110.3° |
C2' | C1' | O4' | 105.0° | 104.9° |
C2' | C1' | H1' | 106.7° | 110.3° |
C1' | C2' | O2' | 107.1° | 110.8° |
C1' | C2' | C3' | 107.1° | 104.0° |
C1' | C2' | H2' | 113.9° | 110.4° |
O4' | C1' | H1' | 117.2° | 110.4° |
C1' | O4' | C4' | 111.2° | 105.3° |
O2' | C2' | C3' | 113.3° | 110.5° |
O2' | C2' | H2' | 107.8° | 110.5° |
C2' | O2' | HO2' | 107.1° | 106.8° |
C3' | C2' | H2' | 107.9° | 110.5° |
C2' | C3' | O3' | 114.7° | 110.5° |
C2' | C3' | C4' | 104.9° | 104.1° |
C2' | C3' | H3' | 110.3° | 110.6° |
O3' | C3' | C4' | 112.8° | 110.5° |
O3' | C3' | H3' | 102.1° | 110.5° |
C3' | O3' | HO3' | 114.7° | 106.8° |
C4' | C3' | H3' | 112.3° | 110.5° |
C3' | C4' | O4' | 105.8° | 104.8° |
C3' | C4' | C5' | 110.1° | 110.5° |
C3' | C4' | H4' | 112.5° | 110.4° |
O4' | C4' | C5' | 112.4° | 110.4° |
O4' | C4' | H4' | 110.3° | 110.4° |
C5' | C4' | H4' | 106.0° | 110.2° |
C4' | C5' | O5' | 110.2° | 109.5° |
C4' | C5' | H5'1 | 111.9° | 109.5° |
C4' | C5' | H5'2 | 111.9° | 109.4° |
O5' | C5' | H5'1 | 111.9° | 109.5° |
O5' | C5' | H5'2 | 111.9° | 109.5° |
C5' | O5' | HO5' | 110.2° | 106.8° |
H5'1 | C5' | H5'2 | 98.5° | 109.5° |
H661 | C66 | H662 | 109.5° | 109.5° |
H661 | C66 | H663 | 100.6° | 109.5° |
H662 | C66 | H663 | 109.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N1 | C2 | N3 | H2 | 180.0° | 180.0° |
N1 | C2 | N3 | C4 | 0.1° | 0.0° |
C2 | N1 | C6 | C5 | 0.3° | 0.2° |
C2 | N1 | C6 | N6 | 179.8° | 180.0° |
C6 | N1 | C2 | N3 | 0.2° | 0.0° |
C6 | N1 | C2 | H2 | 179.8° | 180.0° |
N1 | C6 | C5 | C4 | 0.3° | 0.5° |
N1 | C6 | C5 | N6 | 179.5° | 179.8° |
N1 | C6 | C5 | N7 | 179.6° | 179.8° |
N1 | C6 | N6 | C66 | 0.1° | 0.1° |
N1 | C6 | N6 | HN61 | 125.3° | 180.0° |
C2 | N3 | C4 | C5 | 0.2° | 0.3° |
C2 | N3 | C4 | C9 | 179.7° | 180.0° |
H2 | C2 | N3 | C4 | 179.9° | 180.0° |
N3 | C4 | C5 | C9 | 179.6° | 179.8° |
N3 | C4 | C5 | C6 | 0.3° | 0.5° |
N3 | C4 | C5 | N7 | 179.7° | 180.0° |
N3 | C4 | C9 | N8 | 179.5° | 179.9° |
N3 | C4 | C9 | C1' | 0.6° | 0.3° |
C4 | C5 | C6 | N7 | 179.9° | 179.3° |
C4 | C5 | C6 | N6 | 179.8° | 179.7° |
C4 | C5 | N7 | N8 | 0.2° | 0.0° |
C4 | C5 | N7 | H7 | 179.8° | 180.0° |
C5 | C4 | C9 | N8 | 0.2° | 0.3° |
C5 | C4 | C9 | C1' | 179.7° | 180.0° |
C9 | C4 | C5 | C6 | 179.9° | 179.7° |
C9 | C4 | C5 | N7 | 0.0° | 0.2° |
C4 | C9 | N8 | N7 | 0.4° | 0.3° |
C4 | C9 | N8 | C1' | 179.9° | 179.7° |
C4 | C9 | C1' | C2' | 3.0° | 121.9° |
C4 | C9 | C1' | O4' | 113.4° | 122.6° |
C4 | C9 | C1' | H1' | 121.5° | 0.3° |
C5 | C6 | N6 | C66 | 179.4° | 179.7° |
C5 | C6 | N6 | HN61 | 54.1° | 0.3° |
C6 | C5 | N7 | N8 | 179.7° | 179.4° |
C6 | C5 | N7 | H7 | 0.3° | 0.7° |
N7 | C5 | C6 | N6 | 0.1° | 0.4° |
C5 | N7 | N8 | H7 | 180.0° | 179.9° |
C5 | N7 | N8 | C9 | 0.4° | 0.2° |
C6 | N6 | C66 | HN61 | 125.3° | 179.9° |
C6 | N6 | C66 | H661 | 54.7° | 180.0° |
C6 | N6 | C66 | H662 | 180.0° | 59.9° |
C6 | N6 | C66 | H663 | 54.7° | 60.0° |
N6 | C66 | H661 | H662 | 129.5° | 120.1° |
N6 | C66 | H661 | H663 | 115.2° | 120.0° |
N6 | C66 | H662 | H663 | 125.3° | 119.9° |
HN61 | N6 | C66 | H661 | 180.0° | 0.0° |
HN61 | N6 | C66 | H662 | 54.7° | 120.0° |
HN61 | N6 | C66 | H663 | 70.5° | 120.0° |
N7 | N8 | C9 | C1' | 179.6° | 180.0° |
H7 | N7 | N8 | C9 | 179.6° | 179.8° |
N8 | C9 | C1' | C2' | 176.9° | 58.5° |
N8 | C9 | C1' | O4' | 66.7° | 57.0° |
N8 | C9 | C1' | H1' | 58.4° | 179.3° |
C9 | C1' | C2' | O4' | 117.0° | 118.9° |
C9 | C1' | C2' | H1' | 117.9° | 122.2° |
C9 | C1' | O4' | H1' | 117.7° | 122.2° |
C9 | C1' | C2' | O2' | 121.6° | 98.5° |
C9 | C1' | C2' | C3' | 116.6° | 142.7° |
C9 | C1' | C2' | H2' | 2.5° | 24.2° |
C9 | C1' | O4' | C4' | 108.5° | 159.4° |
C2' | C1' | O4' | H1' | 118.3° | 118.8° |
C1' | C2' | O2' | C3' | 117.8° | 114.7° |
C1' | C2' | O2' | H2' | 123.0° | 122.6° |
C1' | C2' | C3' | H2' | 123.0° | 118.4° |
C1' | C2' | O2' | HO2' | 180.0° | 176.2° |
C1' | C2' | C3' | O3' | 110.0° | 118.8° |
C1' | C2' | C3' | C4' | 14.3° | 0.2° |
C1' | C2' | C3' | H3' | 135.5° | 118.5° |
C2' | C1' | O4' | C4' | 15.5° | 40.4° |
O4' | C1' | C2' | O2' | 121.4° | 142.6° |
O4' | C1' | C2' | C3' | 0.4° | 23.8° |
O4' | C1' | C2' | H2' | 119.5° | 94.7° |
C1' | O4' | C4' | C3' | 25.1° | 40.5° |
C1' | O4' | C4' | C5' | 95.0° | 159.5° |
C1' | O4' | C4' | H4' | 147.0° | 78.4° |
H1' | C1' | C2' | O2' | 3.7° | 23.7° |
H1' | C1' | C2' | C3' | 125.5° | 95.1° |
H1' | C1' | C2' | H2' | 115.4° | 146.4° |
H1' | C1' | O4' | C4' | 133.8° | 78.4° |
O2' | C2' | C3' | H2' | 119.2° | 122.6° |
O2' | C2' | C3' | O3' | 7.9° | 0.1° |
O2' | C2' | C3' | C4' | 132.1° | 118.8° |
O2' | C2' | C3' | H3' | 106.7° | 122.5° |
C3' | C2' | O2' | HO2' | 62.2° | 61.4° |
C2' | C3' | O3' | C4' | 120.0° | 114.6° |
C2' | C3' | O3' | H3' | 119.3° | 122.7° |
C2' | C3' | C4' | H3' | 119.9° | 118.7° |
C2' | C3' | O3' | HO3' | 180.0° | 176.1° |
C2' | C3' | C4' | O4' | 23.1° | 24.1° |
C2' | C3' | C4' | C5' | 98.5° | 143.0° |
C2' | C3' | C4' | H4' | 143.5° | 94.8° |
H2' | C2' | O2' | HO2' | 57.0° | 61.2° |
H2' | C2' | C3' | O3' | 127.0° | 122.8° |
H2' | C2' | C3' | C4' | 108.7° | 118.6° |
H2' | C2' | C3' | H3' | 12.5° | 0.1° |
O3' | C3' | C4' | H3' | 114.7° | 122.7° |
O3' | C3' | C4' | O4' | 102.3° | 142.7° |
O3' | C3' | C4' | C5' | 136.1° | 98.4° |
O3' | C3' | C4' | H4' | 18.1° | 23.8° |
C4' | C3' | O3' | HO3' | 60.1° | 61.5° |
C3' | C4' | O4' | C5' | 120.1° | 119.0° |
C3' | C4' | O4' | H4' | 121.9° | 118.9° |
C3' | C4' | C5' | H4' | 121.9° | 122.3° |
C3' | C4' | C5' | O5' | 177.2° | 176.9° |
C3' | C4' | C5' | H5'1 | 57.5° | 63.0° |
C3' | C4' | C5' | H5'2 | 52.0° | 56.9° |
H3' | C3' | O3' | HO3' | 60.7° | 61.2° |
H3' | C3' | C4' | O4' | 143.0° | 94.6° |
H3' | C3' | C4' | C5' | 21.4° | 24.3° |
H3' | C3' | C4' | H4' | 96.6° | 146.5° |
O4' | C4' | C5' | H4' | 120.5° | 122.2° |
O4' | C4' | C5' | O5' | 65.2° | 61.4° |
O4' | C4' | C5' | H5'1 | 60.1° | 178.5° |
O4' | C4' | C5' | H5'2 | 169.6° | 58.6° |
C4' | C5' | O5' | H5'1 | 125.3° | 120.0° |
C4' | C5' | O5' | H5'2 | 125.3° | 120.0° |
C4' | C5' | H5'1 | H5'2 | 117.8° | 120.0° |
C4' | C5' | O5' | HO5' | 180.0° | 179.9° |
H4' | C4' | C5' | O5' | 55.3° | 60.8° |
H4' | C4' | C5' | H5'1 | 179.4° | 59.3° |
H4' | C4' | C5' | H5'2 | 70.0° | 179.2° |
O5' | C5' | H5'1 | H5'2 | 117.8° | 120.0° |
H5'1 | C5' | O5' | HO5' | 54.7° | 60.0° |
H5'2 | C5' | O5' | HO5' | 54.7° | 60.0° |
H661 | C66 | H662 | H663 | 109.4° | 120.0° |