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Summary Geometry Related PDB entries

FG7

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	N2	sing	1.40Å	1.35Å
C1	C3	doub	1.39Å	1.39Å	Aromatic
C1	C11	sing	1.39Å	1.39Å	Aromatic
C3	C4	sing	1.40Å	1.39Å	Aromatic
C4	C5	sing	1.48Å	1.49Å
C4	C9	doub	1.40Å	1.39Å	Aromatic
C5	O6	sing	1.35Å	1.45Å
C5	O12	doub	1.21Å	1.22Å
O6	C7	sing	1.45Å	1.43Å
C7	C8	sing	1.53Å	1.51Å
C9	C10	sing	1.38Å	1.39Å	Aromatic
C10	C11	doub	1.38Å	1.39Å	Aromatic
N2	HN2	sing	0.97Å	1.00Å
N2	HN2A	sing	0.97Å	1.00Å
C3	H3	sing	1.08Å	1.08Å
C7	H7	sing	1.09Å	1.10Å
C7	H7A	sing	1.09Å	1.10Å
C8	H8	sing	1.09Å	1.10Å
C8	H8A	sing	1.09Å	1.10Å
C8	H8B	sing	1.09Å	1.10Å
C9	H9	sing	1.08Å	1.08Å
C10	H10	sing	1.08Å	1.08Å
C11	H11	sing	1.08Å	1.08Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
N2	C1	C3	119.4°	120.0°
N2	C1	C11	120.5°	120.0°
C1	N2	HN2	109.5°	120.0°
C1	N2	HN2A	109.5°	120.0°
C3	C1	C11	120.2°	120.1°
C1	C3	C4	119.5°	119.7°
C1	C3	H3	120.3°	120.2°
C1	C11	C10	120.3°	120.2°
C1	C11	H11	119.9°	120.0°
C3	C4	C5	119.5°	120.1°
C3	C4	C9	120.7°	119.8°
C4	C3	H3	120.2°	120.1°
C5	C4	C9	119.8°	120.1°
C4	C5	O6	119.5°	120.0°
C4	C5	O12	121.2°	120.0°
C4	C9	C10	119.7°	120.0°
C4	C9	H9	120.1°	120.0°
O6	C5	O12	119.3°	120.0°
C5	O6	C7	118.8°	117.0°
O6	C7	C8	108.9°	109.5°
O6	C7	H7	109.7°	109.5°
O6	C7	H7A	109.7°	109.5°
C8	C7	H7	109.7°	109.4°
C8	C7	H7A	109.7°	109.5°
C7	C8	H8	109.5°	109.5°
C7	C8	H8A	109.5°	109.4°
C7	C8	H8B	109.5°	109.5°
C9	C10	C11	119.6°	120.2°
C10	C9	H9	120.1°	119.9°
C9	C10	H10	120.2°	119.9°
C11	C10	H10	120.2°	119.9°
C10	C11	H11	119.9°	119.9°
HN2	N2	HN2A	109.5°	120.0°
H7	C7	H7A	109.3°	109.4°
H8	C8	H8A	109.5°	109.4°
H8	C8	H8B	109.4°	109.5°
H8A	C8	H8B	109.5°	109.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
N2	C1	C3	C11	179.8°	179.8°
N2	C1	C3	C4	179.8°	180.0°
N2	C1	C11	C10	180.0°	179.7°
C1	N2	HN2	HN2A	120.0°	180.0°
N2	C1	C3	H3	0.2°	0.0°
N2	C1	C11	H11	0.0°	0.1°
C1	C3	C4	H3	180.0°	180.0°
C1	C3	C4	C5	180.0°	180.0°
C1	C3	C4	C9	0.0°	0.0°
C3	C1	C11	C10	0.2°	0.5°
C3	C1	N2	HN2	180.0°	0.0°
C3	C1	N2	HN2A	60.0°	180.0°
C3	C1	C11	H11	179.8°	179.7°
C11	C1	C3	C4	0.1°	0.2°
C1	C11	C10	C9	0.3°	0.6°
C1	C11	C10	H11	180.0°	179.8°
C11	C1	N2	HN2	0.3°	179.8°
C11	C1	N2	HN2A	120.2°	0.2°
C11	C1	C3	H3	179.9°	179.8°
C1	C11	C10	H10	179.8°	179.8°
C3	C4	C5	C9	180.0°	180.0°
C3	C4	C5	O6	173.4°	180.0°
C3	C4	C5	O12	5.5°	0.0°
C3	C4	C9	C10	0.1°	0.0°
C3	C4	C9	H9	179.9°	179.9°
C4	C5	O6	O12	178.9°	180.0°
C4	C5	O6	C7	167.2°	180.0°
C5	C4	C9	C10	180.0°	180.0°
C5	C4	C3	H3	0.0°	0.0°
C5	C4	C9	H9	0.0°	0.1°
C9	C4	C5	O6	6.6°	0.0°
C9	C4	C5	O12	174.6°	179.9°
C4	C9	C10	H9	180.0°	179.9°
C4	C9	C10	C11	0.2°	0.3°
C9	C4	C3	H3	180.0°	180.0°
C4	C9	C10	H10	179.8°	180.0°
C5	O6	C7	C8	165.9°	180.0°
C5	O6	C7	H7	45.9°	60.0°
C5	O6	C7	H7A	74.1°	60.0°
O12	C5	O6	C7	13.9°	0.0°
O6	C7	C8	H7	120.0°	120.0°
O6	C7	C8	H7A	120.0°	120.1°
O6	C7	H7	H7A	120.3°	120.0°
O6	C7	C8	H8	180.0°	180.0°
O6	C7	C8	H8A	60.0°	60.0°
O6	C7	C8	H8B	60.0°	60.0°
C8	C7	H7	H7A	120.2°	120.0°
C7	C8	H8	H8A	120.0°	120.0°
C7	C8	H8	H8B	120.0°	120.1°
C7	C8	H8A	H8B	120.0°	120.0°
C9	C10	C11	H10	180.0°	179.7°
C9	C10	C11	H11	179.8°	179.6°
C11	C10	C9	H9	179.8°	179.8°
H7	C7	C8	H8	60.0°	60.0°
H7	C7	C8	H8A	180.0°	180.0°
H7	C7	C8	H8B	60.0°	60.0°
H7A	C7	C8	H8	60.0°	59.9°
H7A	C7	C8	H8A	60.0°	60.0°
H7A	C7	C8	H8B	180.0°	180.0°
H8	C8	H8A	H8B	120.0°	120.0°
H9	C9	C10	H10	0.2°	0.1°
H10	C10	C11	H11	0.2°	0.0°

247536

PDB entries from 2026-01-14

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