FFJ
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O2 | C2 | doub | 1.22Å | 1.18Å | |
| C2 | N3 | sing | 1.33Å | 1.32Å | |
| C2 | N1 | sing | 1.35Å | 1.33Å | |
| N3 | C4 | doub | 1.33Å | 1.35Å | |
| C2' | C1' | sing | 1.54Å | 1.57Å | |
| C2' | C3' | sing | 1.55Å | 1.31Å | |
| C1' | N1 | sing | 1.47Å | 1.35Å | |
| C1' | O4' | sing | 1.44Å | 1.55Å | |
| N1 | C6 | sing | 1.36Å | 1.34Å | |
| O3' | C3' | sing | 1.43Å | 1.47Å | |
| C3' | C4' | sing | 1.54Å | 1.63Å | |
| C4 | N4 | sing | 1.38Å | 1.46Å | |
| C4 | C5 | sing | 1.41Å | 1.38Å | |
| O4' | C4' | sing | 1.44Å | 1.30Å | |
| C4' | C5' | sing | 1.53Å | 1.53Å | |
| C6 | C5 | doub | 1.35Å | 1.39Å | |
| O2B | PB | doub | 1.48Å | 1.55Å | |
| C5' | O5' | sing | 1.43Å | 1.40Å | |
| O5' | PA | sing | 1.61Å | 1.67Å | |
| PB | O3A | sing | 1.61Å | 1.64Å | |
| PB | O1B | sing | 1.61Å | 1.53Å | |
| PB | C3B | sing | 1.82Å | 1.85Å | |
| O3A | PA | sing | 1.61Å | 1.61Å | |
| F4B | C3B | sing | 1.40Å | 1.36Å | |
| C3B | F3B | sing | 1.40Å | 1.40Å | |
| C3B | PG | sing | 1.82Å | 1.85Å | |
| PA | O2A | doub | 1.48Å | 1.50Å | |
| PA | O1A | sing | 1.61Å | 1.49Å | |
| PG | O3G | doub | 1.48Å | 1.49Å | |
| PG | O2G | sing | 1.61Å | 1.51Å | |
| PG | O1G | sing | 1.61Å | 1.48Å | |
| N4 | H1 | sing | 0.97Å | 1.00Å | |
| N4 | H2 | sing | 0.97Å | 1.00Å | |
| C5 | H3 | sing | 1.08Å | 1.08Å | |
| C6 | H4 | sing | 1.08Å | 1.08Å | |
| C1' | H5 | sing | 1.09Å | 1.10Å | |
| C2' | H6 | sing | 1.09Å | 1.10Å | |
| C2' | H7 | sing | 1.09Å | 1.10Å | |
| C3' | H8 | sing | 1.09Å | 1.10Å | |
| O3' | H9 | sing | 0.97Å | 0.95Å | |
| C4' | H10 | sing | 1.09Å | 1.10Å | |
| C5' | H11 | sing | 1.09Å | 1.10Å | |
| C5' | H12 | sing | 1.09Å | 1.10Å | |
| O1A | H13 | sing | 0.97Å | 0.95Å | |
| O1B | H14 | sing | 0.97Å | 0.95Å | |
| O2G | H15 | sing | 0.97Å | 0.95Å | |
| O1G | H16 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O2 | C2 | N3 | 119.0° | 119.5° |
| O2 | C2 | N1 | 119.0° | 119.5° |
| N3 | C2 | N1 | 122.0° | 121.1° |
| C2 | N3 | C4 | 120.4° | 120.7° |
| C2 | N1 | C1' | 119.2° | 119.8° |
| C2 | N1 | C6 | 119.3° | 120.4° |
| N3 | C4 | N4 | 121.0° | 120.2° |
| N3 | C4 | C5 | 120.2° | 119.7° |
| C1' | C2' | C3' | 103.4° | 104.0° |
| C2' | C1' | N1 | 111.6° | 110.4° |
| C2' | C1' | O4' | 102.7° | 104.8° |
| C2' | C1' | H5 | 108.3° | 110.5° |
| C1' | C2' | H6 | 111.0° | 110.5° |
| C1' | C2' | H7 | 110.9° | 110.5° |
| C2' | C3' | O3' | 114.8° | 110.5° |
| C2' | C3' | C4' | 102.4° | 104.1° |
| C3' | C2' | H6 | 110.9° | 110.5° |
| C3' | C2' | H7 | 111.0° | 110.5° |
| C2' | C3' | H8 | 111.7° | 110.5° |
| N1 | C1' | O4' | 114.0° | 110.3° |
| C1' | N1 | C6 | 121.5° | 119.8° |
| N1 | C1' | H5 | 111.4° | 110.3° |
| C1' | O4' | C4' | 107.7° | 105.2° |
| O4' | C1' | H5 | 108.5° | 110.4° |
| N1 | C6 | C5 | 121.5° | 119.3° |
| N1 | C6 | H4 | 119.2° | 120.4° |
| O3' | C3' | C4' | 110.9° | 110.5° |
| O3' | C3' | H8 | 109.3° | 110.5° |
| C3' | O3' | H9 | 109.5° | 114.0° |
| C3' | C4' | O4' | 104.8° | 104.8° |
| C3' | C4' | C5' | 110.9° | 110.4° |
| C4' | C3' | H8 | 107.3° | 110.5° |
| C3' | C4' | H10 | 107.9° | 110.4° |
| N4 | C4 | C5 | 118.8° | 120.2° |
| C4 | N4 | H1 | 120.0° | 119.9° |
| C4 | N4 | H2 | 120.0° | 120.0° |
| C4 | C5 | C6 | 116.7° | 118.9° |
| C4 | C5 | H3 | 121.7° | 120.6° |
| O4' | C4' | C5' | 111.2° | 110.4° |
| O4' | C4' | H10 | 112.8° | 110.4° |
| C4' | C5' | O5' | 109.2° | 109.5° |
| C5' | C4' | H10 | 109.2° | 110.4° |
| C4' | C5' | H11 | 109.5° | 109.5° |
| C4' | C5' | H12 | 109.6° | 109.4° |
| C6 | C5 | H3 | 121.7° | 120.5° |
| C5 | C6 | H4 | 119.3° | 120.4° |
| O2B | PB | O3A | 106.8° | 109.5° |
| O2B | PB | O1B | 112.1° | 109.5° |
| O2B | PB | C3B | 108.8° | 109.5° |
| C5' | O5' | PA | 117.8° | 123.0° |
| O5' | C5' | H11 | 109.5° | 109.5° |
| O5' | C5' | H12 | 109.5° | 109.5° |
| O5' | PA | O3A | 106.5° | 109.5° |
| O5' | PA | O2A | 110.0° | 109.5° |
| O5' | PA | O1A | 110.3° | 109.5° |
| O3A | PB | O1B | 113.0° | 109.5° |
| O3A | PB | C3B | 103.7° | 109.5° |
| PB | O3A | PA | 129.4° | 134.0° |
| O1B | PB | C3B | 111.9° | 109.4° |
| PB | O1B | H14 | 109.5° | 114.0° |
| PB | C3B | F4B | 109.6° | 109.5° |
| PB | C3B | F3B | 107.1° | 109.4° |
| PB | C3B | PG | 110.3° | 109.5° |
| O3A | PA | O2A | 104.3° | 109.5° |
| O3A | PA | O1A | 112.0° | 109.5° |
| F4B | C3B | F3B | 111.3° | 109.5° |
| F4B | C3B | PG | 110.7° | 109.5° |
| F3B | C3B | PG | 107.8° | 109.4° |
| C3B | PG | O3G | 110.6° | 109.5° |
| C3B | PG | O2G | 109.5° | 109.5° |
| C3B | PG | O1G | 106.8° | 109.4° |
| O2A | PA | O1A | 113.4° | 109.4° |
| PA | O1A | H13 | 109.5° | 114.0° |
| O3G | PG | O2G | 111.4° | 109.5° |
| O3G | PG | O1G | 108.7° | 109.5° |
| O2G | PG | O1G | 109.7° | 109.5° |
| PG | O2G | H15 | 109.5° | 114.0° |
| PG | O1G | H16 | 109.5° | 114.0° |
| H1 | N4 | H2 | 120.0° | 120.0° |
| H6 | C2' | H7 | 109.5° | 110.6° |
| H11 | C5' | H12 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O2 | C2 | N3 | N1 | 178.7° | 179.9° |
| O2 | C2 | N3 | C4 | 179.6° | 180.0° |
| O2 | C2 | N1 | C1' | 0.3° | 0.1° |
| O2 | C2 | N1 | C6 | 179.8° | 179.7° |
| N3 | C2 | N1 | C1' | 178.4° | 180.0° |
| N3 | C2 | N1 | C6 | 1.1° | 0.4° |
| C2 | N3 | C4 | N4 | 179.7° | 180.0° |
| C2 | N3 | C4 | C5 | 0.0° | 0.3° |
| N1 | C2 | N3 | C4 | 0.9° | 0.1° |
| C2 | N1 | C1' | C2' | 92.6° | 61.8° |
| C2 | N1 | C1' | C6 | 179.5° | 179.6° |
| C2 | N1 | C1' | O4' | 151.7° | 53.6° |
| C2 | N1 | C6 | C5 | 0.5° | 0.4° |
| C2 | N1 | C6 | H4 | 179.5° | 179.7° |
| C2 | N1 | C1' | H5 | 28.5° | 175.8° |
| N3 | C4 | N4 | C5 | 179.7° | 179.7° |
| N3 | C4 | C5 | C6 | 0.5° | 0.3° |
| N3 | C4 | N4 | H1 | 0.0° | 179.7° |
| N3 | C4 | N4 | H2 | 180.0° | 0.3° |
| N3 | C4 | C5 | H3 | 179.5° | 179.7° |
| C1' | C2' | C3' | H6 | 119.1° | 118.7° |
| C1' | C2' | C3' | H7 | 119.0° | 118.6° |
| C2' | C1' | N1 | O4' | 115.7° | 115.4° |
| C2' | C1' | N1 | H5 | 121.1° | 122.4° |
| C2' | C1' | O4' | H5 | 114.4° | 119.0° |
| C2' | C1' | N1 | C6 | 86.9° | 117.8° |
| C1' | C2' | C3' | O3' | 161.0° | 118.6° |
| C1' | C2' | C3' | C4' | 40.7° | 0.0° |
| C2' | C1' | O4' | C4' | 0.1° | 40.5° |
| C1' | C2' | H6 | H7 | 122.8° | 122.7° |
| C1' | C2' | C3' | H8 | 73.9° | 118.7° |
| C3' | C2' | C1' | N1 | 93.8° | 142.8° |
| C3' | C2' | C1' | O4' | 28.7° | 24.0° |
| C2' | C3' | O3' | C4' | 115.5° | 114.6° |
| C2' | C3' | O3' | H8 | 126.4° | 122.7° |
| C2' | C3' | C4' | H8 | 117.7° | 118.7° |
| C2' | C3' | C4' | O4' | 43.3° | 24.0° |
| C2' | C3' | C4' | C5' | 163.4° | 142.8° |
| C3' | C2' | C1' | H5 | 143.3° | 94.9° |
| C3' | C2' | H6 | H7 | 122.8° | 122.6° |
| C2' | C3' | O3' | H9 | 143.0° | 61.4° |
| C2' | C3' | C4' | H10 | 77.1° | 94.8° |
| N1 | C1' | O4' | H5 | 124.8° | 122.2° |
| N1 | C1' | O4' | C4' | 120.8° | 159.4° |
| C1' | N1 | C6 | C5 | 178.9° | 180.0° |
| C1' | N1 | C6 | H4 | 1.0° | 0.1° |
| N1 | C1' | C2' | H6 | 147.2° | 98.6° |
| N1 | C1' | C2' | H7 | 25.2° | 24.2° |
| O4' | C1' | N1 | C6 | 28.9° | 126.8° |
| C1' | O4' | C4' | C3' | 22.8° | 40.6° |
| C1' | O4' | C4' | C5' | 142.6° | 159.4° |
| O4' | C1' | C2' | H6 | 90.3° | 142.6° |
| O4' | C1' | C2' | H7 | 147.8° | 94.6° |
| C1' | O4' | C4' | H10 | 94.4° | 78.3° |
| N1 | C6 | C5 | C4 | 0.3° | 0.0° |
| N1 | C6 | C5 | H4 | 180.0° | 179.9° |
| N1 | C6 | C5 | H3 | 179.7° | 179.9° |
| C6 | N1 | C1' | H5 | 152.0° | 4.5° |
| O3' | C3' | C4' | H8 | 119.3° | 122.7° |
| O3' | C3' | C4' | O4' | 166.3° | 142.7° |
| O3' | C3' | C4' | C5' | 73.6° | 98.5° |
| O3' | C3' | C2' | H6 | 41.9° | 0.0° |
| O3' | C3' | C2' | H7 | 80.0° | 122.7° |
| O3' | C3' | C4' | H10 | 45.9° | 23.8° |
| C3' | C4' | O4' | C5' | 119.9° | 118.8° |
| C3' | C4' | O4' | H10 | 117.1° | 118.9° |
| C3' | C4' | C5' | H10 | 118.8° | 122.3° |
| C3' | C4' | C5' | O5' | 63.4° | 175.1° |
| C4' | C3' | C2' | H6 | 78.4° | 118.6° |
| C4' | C3' | C2' | H7 | 159.7° | 118.7° |
| C4' | C3' | O3' | H9 | 101.5° | 176.0° |
| C3' | C4' | C5' | H11 | 176.6° | 55.0° |
| C3' | C4' | C5' | H12 | 56.5° | 65.0° |
| N4 | C4 | C5 | C6 | 179.8° | 180.0° |
| C4 | N4 | H1 | H2 | 180.0° | 179.9° |
| N4 | C4 | C5 | H3 | 0.2° | 0.0° |
| C4 | C5 | C6 | H3 | 180.0° | 180.0° |
| C5 | C4 | N4 | H1 | 179.7° | 0.1° |
| C5 | C4 | N4 | H2 | 0.3° | 180.0° |
| C4 | C5 | C6 | H4 | 179.7° | 180.0° |
| O4' | C4' | C5' | H10 | 125.1° | 122.3° |
| O4' | C4' | C5' | O5' | 52.8° | 69.6° |
| C4' | O4' | C1' | H5 | 114.5° | 78.4° |
| O4' | C4' | C3' | H8 | 74.4° | 94.7° |
| O4' | C4' | C5' | H11 | 67.2° | 170.3° |
| O4' | C4' | C5' | H12 | 172.7° | 50.4° |
| C4' | C5' | O5' | H11 | 119.9° | 120.0° |
| C4' | C5' | O5' | H12 | 120.0° | 119.9° |
| C4' | C5' | O5' | PA | 138.2° | 180.0° |
| C5' | C4' | C3' | H8 | 45.7° | 24.1° |
| C4' | C5' | H11 | H12 | 120.1° | 119.9° |
| O2B | PB | O3A | O1B | 123.7° | 120.0° |
| O2B | PB | O3A | C3B | 114.9° | 120.0° |
| O2B | PB | O1B | C3B | 122.6° | 120.0° |
| O2B | PB | O3A | PA | 134.7° | 60.1° |
| O2B | PB | C3B | F4B | 28.1° | 180.0° |
| O2B | PB | C3B | F3B | 92.8° | 60.0° |
| O2B | PB | C3B | PG | 150.2° | 60.0° |
| O2B | PB | O1B | H14 | 0.0° | 180.0° |
| C5' | O5' | PA | O3A | 69.5° | 175.0° |
| C5' | O5' | PA | O2A | 178.1° | 54.9° |
| C5' | O5' | PA | O1A | 52.3° | 65.0° |
| O5' | C5' | C4' | H10 | 177.8° | 52.7° |
| O5' | C5' | H11 | H12 | 120.1° | 120.0° |
| O5' | PA | O3A | PB | 101.5° | 165.0° |
| O5' | PA | O3A | O2A | 116.3° | 120.0° |
| O5' | PA | O3A | O1A | 120.7° | 120.0° |
| O5' | PA | O2A | O1A | 124.1° | 120.0° |
| PA | O5' | C5' | H11 | 101.9° | 60.0° |
| PA | O5' | C5' | H12 | 18.2° | 60.1° |
| O5' | PA | O1A | H13 | 123.9° | 60.0° |
| O3A | PB | O1B | C3B | 116.7° | 120.0° |
| O3A | PB | C3B | F4B | 141.5° | 60.0° |
| O3A | PB | C3B | F3B | 20.7° | 60.0° |
| O3A | PB | C3B | PG | 96.3° | 179.9° |
| PB | O3A | PA | O2A | 142.2° | 44.9° |
| PB | O3A | PA | O1A | 19.2° | 75.0° |
| O3A | PB | O1B | H14 | 120.8° | 60.0° |
| O1B | PB | O3A | PA | 11.0° | 60.0° |
| O1B | PB | C3B | F4B | 96.3° | 60.0° |
| O1B | PB | C3B | F3B | 142.8° | 180.0° |
| O1B | PB | C3B | PG | 25.8° | 60.0° |
| C3B | PB | O3A | PA | 110.4° | 179.9° |
| PB | C3B | F4B | F3B | 118.2° | 120.0° |
| PB | C3B | F4B | PG | 121.9° | 120.0° |
| PB | C3B | F3B | PG | 118.7° | 120.0° |
| PB | C3B | PG | O3G | 90.3° | 59.9° |
| PB | C3B | PG | O2G | 32.8° | 180.0° |
| PB | C3B | PG | O1G | 151.5° | 60.0° |
| C3B | PB | O1B | H14 | 122.6° | 60.0° |
| O3A | PA | O2A | O1A | 122.1° | 120.0° |
| O3A | PA | O1A | H13 | 117.7° | 60.0° |
| F4B | C3B | F3B | PG | 121.5° | 120.0° |
| F4B | C3B | PG | O3G | 31.2° | 180.0° |
| F4B | C3B | PG | O2G | 154.3° | 60.0° |
| F4B | C3B | PG | O1G | 86.9° | 60.0° |
| F3B | C3B | PG | O3G | 153.1° | 60.0° |
| F3B | C3B | PG | O2G | 83.8° | 60.1° |
| F3B | C3B | PG | O1G | 35.0° | 180.0° |
| C3B | PG | O3G | O2G | 122.0° | 120.0° |
| C3B | PG | O3G | O1G | 117.0° | 120.0° |
| C3B | PG | O2G | O1G | 117.0° | 119.9° |
| C3B | PG | O2G | H15 | 122.6° | 180.0° |
| C3B | PG | O1G | H16 | 119.4° | 60.0° |
| O2A | PA | O1A | H13 | 0.0° | 180.0° |
| O3G | PG | O2G | O1G | 120.4° | 120.0° |
| O3G | PG | O2G | H15 | 0.0° | 59.9° |
| O3G | PG | O1G | H16 | 0.0° | 180.0° |
| O2G | PG | O1G | H16 | 122.0° | 60.0° |
| O1G | PG | O2G | H15 | 120.4° | 60.1° |
| H3 | C5 | C6 | H4 | 0.3° | 0.0° |
| H5 | C1' | C2' | H6 | 24.2° | 23.7° |
| H5 | C1' | C2' | H7 | 97.7° | 146.5° |
| H6 | C2' | C3' | H8 | 167.1° | 122.7° |
| H7 | C2' | C3' | H8 | 45.2° | 0.0° |
| H8 | C3' | O3' | H9 | 16.6° | 61.3° |
| H8 | C3' | C4' | H10 | 165.2° | 146.5° |
| H10 | C4' | C5' | H11 | 57.9° | 67.4° |
| H10 | C4' | C5' | H12 | 62.2° | 172.7° |
