FDV
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O2 | C2 | doub | 1.22Å | 1.19Å | |
| C2 | N3 | sing | 1.35Å | 1.33Å | |
| C2 | N1 | sing | 1.35Å | 1.32Å | |
| N3 | C4 | sing | 1.35Å | 1.33Å | |
| C2' | C1' | sing | 1.54Å | 1.56Å | |
| C2' | C3' | sing | 1.55Å | 1.28Å | |
| C1' | N1 | sing | 1.47Å | 1.34Å | |
| C1' | O4' | sing | 1.44Å | 1.55Å | |
| N1 | C6 | sing | 1.37Å | 1.34Å | |
| C4 | O4 | doub | 1.22Å | 1.20Å | |
| C4 | C5 | sing | 1.42Å | 1.41Å | |
| O3' | C3' | sing | 1.43Å | 1.48Å | |
| C3' | C4' | sing | 1.54Å | 1.64Å | |
| O4' | C4' | sing | 1.44Å | 1.27Å | |
| C6 | C5 | doub | 1.35Å | 1.40Å | |
| C4' | C5' | sing | 1.53Å | 1.51Å | |
| C5 | C7 | sing | 1.51Å | 1.55Å | |
| O2B | PB | doub | 1.48Å | 1.52Å | |
| C5' | O5' | sing | 1.43Å | 1.42Å | |
| O5' | PA | sing | 1.61Å | 1.59Å | |
| O3A | PB | sing | 1.61Å | 1.62Å | |
| O3A | PA | sing | 1.61Å | 1.60Å | |
| PB | O1B | sing | 1.61Å | 1.53Å | |
| PB | C3B | sing | 1.82Å | 1.83Å | |
| PA | O2A | doub | 1.48Å | 1.51Å | |
| PA | O1A | sing | 1.61Å | 1.48Å | |
| C4B | C3B | sing | 1.53Å | 1.50Å | |
| C3B | PG | sing | 1.82Å | 1.82Å | |
| PG | O3G | doub | 1.48Å | 1.53Å | |
| PG | O1G | sing | 1.61Å | 1.51Å | |
| PG | O2G | sing | 1.61Å | 1.53Å | |
| N3 | H1 | sing | 0.97Å | 1.00Å | |
| C7 | H2 | sing | 1.09Å | 1.10Å | |
| C7 | H3 | sing | 1.09Å | 1.10Å | |
| C7 | H4 | sing | 1.09Å | 1.10Å | |
| C6 | H5 | sing | 1.08Å | 1.08Å | |
| C1' | H6 | sing | 1.09Å | 1.10Å | |
| O1A | H7 | sing | 0.97Å | 0.95Å | |
| O1G | H8 | sing | 0.97Å | 0.95Å | |
| C2' | H9 | sing | 1.09Å | 1.10Å | |
| C2' | H10 | sing | 1.09Å | 1.10Å | |
| O1B | H11 | sing | 0.97Å | 0.95Å | |
| C4B | H12 | sing | 1.09Å | 1.10Å | |
| C4B | H13 | sing | 1.09Å | 1.10Å | |
| C4B | H14 | sing | 1.09Å | 1.10Å | |
| O2G | H15 | sing | 0.97Å | 0.95Å | |
| C3' | H16 | sing | 1.09Å | 1.10Å | |
| O3' | H17 | sing | 0.97Å | 0.95Å | |
| C3B | H18 | sing | 1.09Å | 1.10Å | |
| C4' | H19 | sing | 1.09Å | 1.10Å | |
| C5' | H20 | sing | 1.09Å | 1.10Å | |
| C5' | H21 | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O2 | C2 | N3 | 118.9° | 119.5° |
| O2 | C2 | N1 | 118.9° | 119.5° |
| N3 | C2 | N1 | 122.2° | 120.9° |
| C2 | N3 | C4 | 120.2° | 120.2° |
| C2 | N3 | H1 | 119.9° | 119.9° |
| C2 | N1 | C1' | 118.8° | 119.7° |
| C2 | N1 | C6 | 120.4° | 120.6° |
| N3 | C4 | O4 | 120.4° | 120.3° |
| N3 | C4 | C5 | 120.6° | 119.4° |
| C4 | N3 | H1 | 119.9° | 119.9° |
| C1' | C2' | C3' | 104.1° | 104.1° |
| C2' | C1' | N1 | 111.3° | 110.3° |
| C2' | C1' | O4' | 103.4° | 104.8° |
| C2' | C1' | H6 | 108.4° | 110.5° |
| C1' | C2' | H9 | 110.8° | 110.5° |
| C1' | C2' | H10 | 110.8° | 110.5° |
| C2' | C3' | O3' | 114.3° | 110.5° |
| C2' | C3' | C4' | 102.1° | 104.0° |
| C3' | C2' | H9 | 110.8° | 110.5° |
| C3' | C2' | H10 | 110.8° | 110.5° |
| C2' | C3' | H16 | 112.0° | 110.5° |
| N1 | C1' | O4' | 113.7° | 110.4° |
| C1' | N1 | C6 | 120.8° | 119.7° |
| N1 | C1' | H6 | 111.4° | 110.3° |
| C1' | O4' | C4' | 105.9° | 105.3° |
| O4' | C1' | H6 | 108.4° | 110.4° |
| N1 | C6 | C5 | 120.3° | 119.7° |
| N1 | C6 | H5 | 119.9° | 120.1° |
| O4 | C4 | C5 | 119.0° | 120.3° |
| C4 | C5 | C6 | 116.3° | 119.1° |
| C4 | C5 | C7 | 122.6° | 120.4° |
| O3' | C3' | C4' | 112.1° | 110.5° |
| O3' | C3' | H16 | 108.9° | 110.6° |
| C3' | O3' | H17 | 109.5° | 114.0° |
| C3' | C4' | O4' | 106.3° | 104.8° |
| C3' | C4' | C5' | 109.6° | 110.4° |
| C4' | C3' | H16 | 107.1° | 110.5° |
| C3' | C4' | H19 | 107.4° | 110.4° |
| O4' | C4' | C5' | 111.8° | 110.4° |
| O4' | C4' | H19 | 112.7° | 110.4° |
| C6 | C5 | C7 | 121.1° | 120.5° |
| C5 | C6 | H5 | 119.9° | 120.1° |
| C4' | C5' | O5' | 109.7° | 109.5° |
| C5' | C4' | H19 | 108.9° | 110.3° |
| C4' | C5' | H20 | 109.4° | 109.5° |
| C4' | C5' | H21 | 109.4° | 109.4° |
| C5 | C7 | H2 | 109.5° | 109.5° |
| C5 | C7 | H3 | 109.5° | 109.4° |
| C5 | C7 | H4 | 109.5° | 109.4° |
| O2B | PB | O3A | 105.5° | 109.5° |
| O2B | PB | O1B | 112.3° | 109.5° |
| O2B | PB | C3B | 105.1° | 109.5° |
| C5' | O5' | PA | 116.7° | 123.0° |
| O5' | C5' | H20 | 109.4° | 109.5° |
| O5' | C5' | H21 | 109.4° | 109.5° |
| O5' | PA | O3A | 108.2° | 109.4° |
| O5' | PA | O2A | 107.6° | 109.5° |
| O5' | PA | O1A | 107.5° | 109.5° |
| PB | O3A | PA | 128.4° | 134.0° |
| O3A | PB | O1B | 110.4° | 109.5° |
| O3A | PB | C3B | 112.8° | 109.5° |
| O3A | PA | O2A | 108.4° | 109.5° |
| O3A | PA | O1A | 113.3° | 109.4° |
| O1B | PB | C3B | 110.6° | 109.5° |
| PB | O1B | H11 | 109.5° | 114.0° |
| PB | C3B | C4B | 110.4° | 109.4° |
| PB | C3B | PG | 110.4° | 109.5° |
| PB | C3B | H18 | 106.8° | 109.4° |
| O2A | PA | O1A | 111.6° | 109.5° |
| PA | O1A | H7 | 109.5° | 114.0° |
| C4B | C3B | PG | 111.6° | 109.5° |
| C3B | C4B | H12 | 109.5° | 109.5° |
| C3B | C4B | H13 | 109.5° | 109.5° |
| C3B | C4B | H14 | 109.5° | 109.4° |
| C4B | C3B | H18 | 110.7° | 109.5° |
| C3B | PG | O3G | 105.8° | 109.5° |
| C3B | PG | O1G | 112.7° | 109.5° |
| C3B | PG | O2G | 109.6° | 109.5° |
| PG | C3B | H18 | 106.9° | 109.5° |
| O3G | PG | O1G | 111.4° | 109.5° |
| O3G | PG | O2G | 108.8° | 109.5° |
| O1G | PG | O2G | 108.6° | 109.5° |
| PG | O1G | H8 | 109.5° | 114.0° |
| PG | O2G | H15 | 109.5° | 114.0° |
| H2 | C7 | H3 | 109.5° | 109.5° |
| H2 | C7 | H4 | 109.5° | 109.5° |
| H3 | C7 | H4 | 109.4° | 109.5° |
| H9 | C2' | H10 | 109.5° | 110.6° |
| H12 | C4B | H13 | 109.5° | 109.5° |
| H12 | C4B | H14 | 109.4° | 109.5° |
| H13 | C4B | H14 | 109.5° | 109.5° |
| H20 | C5' | H21 | 109.4° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O2 | C2 | N3 | N1 | 179.6° | 179.9° |
| O2 | C2 | N3 | C4 | 180.0° | 180.0° |
| O2 | C2 | N1 | C1' | 1.0° | 0.2° |
| O2 | C2 | N1 | C6 | 179.7° | 180.0° |
| O2 | C2 | N3 | H1 | 0.0° | 0.1° |
| C2 | N3 | C4 | H1 | 180.0° | 180.0° |
| N3 | C2 | N1 | C1' | 179.4° | 179.7° |
| N3 | C2 | N1 | C6 | 0.1° | 0.1° |
| C2 | N3 | C4 | O4 | 179.9° | 180.0° |
| C2 | N3 | C4 | C5 | 0.2° | 0.0° |
| N1 | C2 | N3 | C4 | 0.4° | 0.1° |
| C2 | N1 | C1' | C2' | 95.3° | 61.6° |
| C2 | N1 | C1' | C6 | 179.3° | 179.8° |
| C2 | N1 | C1' | O4' | 148.5° | 53.8° |
| C2 | N1 | C6 | C5 | 0.3° | 0.1° |
| N1 | C2 | N3 | H1 | 179.6° | 180.0° |
| C2 | N1 | C6 | H5 | 179.7° | 180.0° |
| C2 | N1 | C1' | H6 | 25.7° | 176.0° |
| N3 | C4 | O4 | C5 | 180.0° | 179.9° |
| N3 | C4 | C5 | C6 | 0.2° | 0.1° |
| N3 | C4 | C5 | C7 | 179.7° | 180.0° |
| C1' | C2' | C3' | H9 | 119.1° | 118.7° |
| C1' | C2' | C3' | H10 | 119.1° | 118.7° |
| C2' | C1' | N1 | O4' | 116.2° | 115.4° |
| C2' | C1' | N1 | H6 | 121.0° | 122.4° |
| C2' | C1' | O4' | H6 | 114.8° | 119.0° |
| C2' | C1' | N1 | C6 | 84.0° | 118.2° |
| C1' | C2' | C3' | O3' | 160.6° | 118.6° |
| C1' | C2' | C3' | C4' | 39.4° | 0.0° |
| C2' | C1' | O4' | C4' | 0.9° | 40.5° |
| C1' | C2' | H9 | H10 | 122.5° | 122.7° |
| C1' | C2' | C3' | H16 | 74.9° | 118.6° |
| C3' | C2' | C1' | N1 | 94.4° | 142.8° |
| C3' | C2' | C1' | O4' | 27.9° | 24.0° |
| C2' | C3' | O3' | C4' | 115.5° | 114.6° |
| C2' | C3' | O3' | H16 | 126.1° | 122.7° |
| C2' | C3' | C4' | H16 | 117.8° | 118.6° |
| C2' | C3' | C4' | O4' | 43.3° | 24.0° |
| C2' | C3' | C4' | C5' | 164.3° | 142.8° |
| C3' | C2' | C1' | H6 | 142.8° | 94.9° |
| C3' | C2' | H9 | H10 | 122.5° | 122.6° |
| C2' | C3' | O3' | H17 | 148.4° | 61.5° |
| C2' | C3' | C4' | H19 | 77.5° | 95.0° |
| N1 | C1' | O4' | H6 | 124.4° | 122.2° |
| N1 | C1' | O4' | C4' | 121.6° | 159.3° |
| C1' | N1 | C6 | C5 | 178.9° | 179.8° |
| C1' | N1 | C6 | H5 | 1.1° | 0.2° |
| N1 | C1' | C2' | H9 | 146.5° | 98.5° |
| N1 | C1' | C2' | H10 | 24.7° | 24.2° |
| O4' | C1' | N1 | C6 | 32.2° | 126.4° |
| C1' | O4' | C4' | C3' | 23.0° | 40.5° |
| C1' | O4' | C4' | C5' | 142.6° | 159.3° |
| O4' | C1' | C2' | H9 | 91.2° | 142.6° |
| O4' | C1' | C2' | H10 | 147.1° | 94.6° |
| C1' | O4' | C4' | H19 | 94.4° | 78.4° |
| N1 | C6 | C5 | C4 | 0.5° | 0.0° |
| N1 | C6 | C5 | H5 | 180.0° | 180.0° |
| N1 | C6 | C5 | C7 | 179.4° | 180.0° |
| C6 | N1 | C1' | H6 | 155.0° | 4.2° |
| O4 | C4 | C5 | C6 | 179.7° | 180.0° |
| O4 | C4 | C5 | C7 | 0.4° | 0.0° |
| O4 | C4 | N3 | H1 | 0.2° | 0.0° |
| C4 | C5 | C6 | C7 | 179.9° | 180.0° |
| C5 | C4 | N3 | H1 | 179.8° | 179.9° |
| C4 | C5 | C7 | H2 | 180.0° | 0.1° |
| C4 | C5 | C7 | H3 | 60.0° | 120.0° |
| C4 | C5 | C7 | H4 | 60.0° | 120.0° |
| C4 | C5 | C6 | H5 | 179.5° | 179.9° |
| O3' | C3' | C4' | H16 | 119.4° | 122.7° |
| O3' | C3' | C4' | O4' | 166.1° | 142.6° |
| O3' | C3' | C4' | C5' | 73.0° | 98.5° |
| O3' | C3' | C2' | H9 | 41.5° | 0.0° |
| O3' | C3' | C2' | H10 | 80.2° | 122.7° |
| O3' | C3' | C4' | H19 | 45.2° | 23.7° |
| C3' | C4' | O4' | C5' | 119.6° | 118.9° |
| C3' | C4' | O4' | H19 | 117.4° | 118.9° |
| C3' | C4' | C5' | H19 | 117.3° | 122.2° |
| C3' | C4' | C5' | O5' | 66.4° | 175.0° |
| C4' | C3' | C2' | H9 | 79.7° | 118.7° |
| C4' | C3' | C2' | H10 | 158.5° | 118.6° |
| C4' | C3' | O3' | H17 | 96.0° | 176.1° |
| C3' | C4' | C5' | H20 | 173.5° | 55.0° |
| C3' | C4' | C5' | H21 | 53.6° | 65.0° |
| O4' | C4' | C5' | H19 | 125.2° | 122.3° |
| O4' | C4' | C5' | O5' | 51.1° | 69.6° |
| C4' | O4' | C1' | H6 | 114.0° | 78.5° |
| O4' | C4' | C3' | H16 | 74.5° | 94.7° |
| O4' | C4' | C5' | H20 | 68.9° | 170.4° |
| O4' | C4' | C5' | H21 | 171.2° | 50.4° |
| C6 | C5 | C7 | H2 | 0.1° | 180.0° |
| C6 | C5 | C7 | H3 | 119.9° | 60.0° |
| C6 | C5 | C7 | H4 | 120.1° | 60.0° |
| C4' | C5' | O5' | H20 | 120.0° | 120.0° |
| C4' | C5' | O5' | H21 | 120.0° | 120.0° |
| C4' | C5' | O5' | PA | 138.7° | 180.0° |
| C5' | C4' | C3' | H16 | 46.4° | 24.2° |
| C4' | C5' | H20 | H21 | 119.9° | 120.0° |
| C5 | C7 | H2 | H3 | 120.0° | 120.0° |
| C5 | C7 | H2 | H4 | 120.0° | 119.9° |
| C5 | C7 | H3 | H4 | 120.0° | 119.9° |
| C7 | C5 | C6 | H5 | 0.6° | 0.0° |
| O2B | PB | O3A | O1B | 121.6° | 120.0° |
| O2B | PB | O3A | C3B | 114.1° | 120.0° |
| O2B | PB | O3A | PA | 139.3° | 60.0° |
| O2B | PB | O1B | C3B | 117.0° | 120.0° |
| O2B | PB | C3B | C4B | 85.1° | 165.0° |
| O2B | PB | C3B | PG | 151.1° | 75.0° |
| O2B | PB | O1B | H11 | 0.0° | 180.0° |
| O2B | PB | C3B | H18 | 35.3° | 45.0° |
| C5' | O5' | PA | O3A | 65.6° | 175.0° |
| C5' | O5' | PA | O2A | 177.5° | 55.0° |
| C5' | O5' | PA | O1A | 57.1° | 65.0° |
| O5' | C5' | C4' | H19 | 176.3° | 52.8° |
| O5' | C5' | H20 | H21 | 119.9° | 120.0° |
| O5' | PA | O3A | PB | 111.4° | 165.0° |
| O5' | PA | O3A | O2A | 116.4° | 120.0° |
| O5' | PA | O3A | O1A | 119.2° | 120.0° |
| O5' | PA | O2A | O1A | 117.8° | 120.0° |
| O5' | PA | O1A | H7 | 117.8° | 60.0° |
| PA | O5' | C5' | H20 | 101.2° | 60.0° |
| PA | O5' | C5' | H21 | 18.7° | 60.0° |
| O3A | PB | O1B | C3B | 125.5° | 120.0° |
| PB | O3A | PA | O2A | 132.2° | 45.0° |
| PB | O3A | PA | O1A | 7.7° | 75.0° |
| O3A | PB | C3B | C4B | 29.3° | 45.0° |
| O3A | PB | C3B | PG | 94.5° | 165.0° |
| O3A | PB | O1B | H11 | 117.4° | 60.0° |
| O3A | PB | C3B | H18 | 149.6° | 75.0° |
| PA | O3A | PB | O1B | 17.7° | 60.0° |
| PA | O3A | PB | C3B | 106.6° | 180.0° |
| O3A | PA | O2A | O1A | 125.4° | 120.0° |
| O3A | PA | O1A | H7 | 122.7° | 60.0° |
| O1B | PB | C3B | C4B | 153.5° | 75.0° |
| O1B | PB | C3B | PG | 29.7° | 45.0° |
| O1B | PB | C3B | H18 | 86.2° | 165.0° |
| PB | C3B | C4B | PG | 123.1° | 120.0° |
| PB | C3B | C4B | H18 | 118.0° | 119.9° |
| PB | C3B | PG | H18 | 115.8° | 120.0° |
| PB | C3B | PG | O3G | 104.9° | 60.0° |
| PB | C3B | PG | O1G | 17.0° | 60.0° |
| PB | C3B | PG | O2G | 138.0° | 180.0° |
| C3B | PB | O1B | H11 | 117.0° | 60.0° |
| PB | C3B | C4B | H12 | 180.0° | 60.0° |
| PB | C3B | C4B | H13 | 60.0° | 60.0° |
| PB | C3B | C4B | H14 | 60.0° | 180.0° |
| O2A | PA | O1A | H7 | 0.0° | 180.0° |
| C4B | C3B | PG | H18 | 121.1° | 120.1° |
| C4B | C3B | PG | O3G | 132.0° | 60.0° |
| C4B | C3B | PG | O1G | 106.1° | 180.0° |
| C4B | C3B | PG | O2G | 14.9° | 60.0° |
| C3B | C4B | H12 | H13 | 120.0° | 120.0° |
| C3B | C4B | H12 | H14 | 120.0° | 120.0° |
| C3B | C4B | H13 | H14 | 120.0° | 120.0° |
| C3B | PG | O3G | O1G | 122.8° | 120.0° |
| C3B | PG | O3G | O2G | 117.6° | 120.0° |
| C3B | PG | O1G | O2G | 121.6° | 120.0° |
| C3B | PG | O1G | H8 | 118.8° | 60.0° |
| PG | C3B | C4B | H12 | 56.9° | 180.0° |
| PG | C3B | C4B | H13 | 176.9° | 60.0° |
| PG | C3B | C4B | H14 | 63.1° | 60.0° |
| C3B | PG | O2G | H15 | 115.2° | 180.0° |
| O3G | PG | O1G | O2G | 119.7° | 120.0° |
| O3G | PG | O1G | H8 | 0.0° | 180.0° |
| O3G | PG | O2G | H15 | 0.0° | 60.0° |
| O3G | PG | C3B | H18 | 10.9° | 180.0° |
| O1G | PG | O2G | H15 | 121.3° | 60.0° |
| O1G | PG | C3B | H18 | 132.8° | 59.9° |
| O2G | PG | O1G | H8 | 119.7° | 60.0° |
| O2G | PG | C3B | H18 | 106.2° | 60.0° |
| H2 | C7 | H3 | H4 | 119.9° | 120.0° |
| H6 | C1' | C2' | H9 | 23.7° | 23.7° |
| H6 | C1' | C2' | H10 | 98.1° | 146.5° |
| H9 | C2' | C3' | H16 | 166.1° | 122.7° |
| H10 | C2' | C3' | H16 | 44.3° | 0.0° |
| H12 | C4B | H13 | H14 | 120.0° | 120.0° |
| H12 | C4B | C3B | H18 | 62.0° | 59.9° |
| H13 | C4B | C3B | H18 | 58.0° | 180.0° |
| H14 | C4B | C3B | H18 | 178.0° | 60.1° |
| H16 | C3' | O3' | H17 | 22.3° | 61.2° |
| H16 | C3' | C4' | H19 | 164.6° | 146.4° |
| H19 | C4' | C5' | H20 | 56.2° | 67.3° |
| H19 | C4' | C5' | H21 | 63.6° | 172.8° |
