FAI
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
OP1 | P | doub | 1.48Å | 1.61Å | |
O5 | C6 | doub | 1.22Å | 1.23Å | |
O6 | C8 | doub | 1.21Å | 1.25Å | |
OP2 | P | sing | 1.61Å | 1.62Å | |
N1 | C3A | sing | 1.36Å | 1.33Å | Aromatic |
N1 | C5 | doub | 1.30Å | 1.33Å | Aromatic |
C6 | C3A | sing | 1.47Å | 1.52Å | |
C6 | N2 | sing | 1.35Å | 1.34Å | |
O3 | P | sing | 1.61Å | 1.59Å | |
O3 | C4 | sing | 1.43Å | 1.43Å | |
C3A | C7A | doub | 1.39Å | 1.38Å | Aromatic |
O | C | sing | 1.44Å | 1.43Å | |
O | C1 | sing | 1.44Å | 1.42Å | |
P | OP3 | sing | 1.61Å | 1.49Å | |
C5 | N | sing | 1.36Å | 1.34Å | Aromatic |
C4 | C | sing | 1.53Å | 1.53Å | |
C8 | N3 | sing | 1.35Å | 1.35Å | |
C7A | N | sing | 1.36Å | 1.33Å | Aromatic |
C7A | N3 | sing | 1.39Å | 1.34Å | |
N | C1 | sing | 1.46Å | 1.47Å | |
C | C3 | sing | 1.55Å | 1.54Å | |
C1 | C2 | sing | 1.55Å | 1.52Å | |
C3 | C2 | sing | 1.55Å | 1.53Å | |
C3 | O3' | sing | 1.43Å | 1.43Å | |
C2 | O2' | sing | 1.43Å | 1.44Å | |
OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
OP3 | HOP3 | sing | 0.97Å | 0.95Å | |
C4 | H41 | sing | 1.09Å | 1.10Å | |
C4 | H42 | sing | 1.09Å | 1.10Å | |
C | H | sing | 1.09Å | 1.10Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
O3' | HO3' | sing | 0.97Å | 0.95Å | |
C2 | H2 | sing | 1.09Å | 1.10Å | |
O2' | HO2' | sing | 0.97Å | 0.95Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C5 | H5 | sing | 1.08Å | 1.08Å | |
N2 | HN21 | sing | 0.97Å | 1.00Å | |
N2 | HN22 | sing | 0.97Å | 1.00Å | |
N3 | HN3 | sing | 0.97Å | 1.00Å | |
C8 | H8 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
OP1 | P | OP2 | 105.1° | 109.5° |
OP1 | P | O3 | 108.2° | 109.5° |
OP1 | P | OP3 | 110.3° | 109.5° |
O5 | C6 | C3A | 118.3° | 120.0° |
O5 | C6 | N2 | 124.8° | 120.0° |
O6 | C8 | N3 | 127.7° | 120.0° |
O6 | C8 | H8 | 116.1° | 120.0° |
OP2 | P | O3 | 107.2° | 109.4° |
OP2 | P | OP3 | 112.7° | 109.5° |
P | OP2 | HOP2 | 109.5° | 113.9° |
C3A | N1 | C5 | 107.5° | 109.2° |
N1 | C3A | C6 | 122.2° | 126.4° |
N1 | C3A | C7A | 108.3° | 107.2° |
N1 | C5 | N | 109.4° | 109.5° |
N1 | C5 | H5 | 125.3° | 125.2° |
C3A | C6 | N2 | 116.9° | 120.0° |
C6 | C3A | C7A | 129.6° | 126.4° |
C6 | N2 | HN21 | 109.3° | 120.0° |
C6 | N2 | HN22 | 125.3° | 120.0° |
P | O3 | C4 | 117.8° | 123.0° |
O3 | P | OP3 | 112.9° | 109.5° |
O3 | C4 | C | 110.4° | 109.4° |
O3 | C4 | H41 | 109.1° | 109.5° |
O3 | C4 | H42 | 108.9° | 109.5° |
C3A | C7A | N | 106.7° | 106.4° |
C3A | C7A | N3 | 127.3° | 126.8° |
C | O | C1 | 108.8° | 105.3° |
O | C | C4 | 104.0° | 110.4° |
O | C | C3 | 106.7° | 104.8° |
O | C | H | 116.1° | 110.5° |
O | C1 | N | 100.9° | 110.4° |
O | C1 | C2 | 106.5° | 104.8° |
O | C1 | H1 | 116.9° | 110.4° |
P | OP3 | HOP3 | 109.5° | 114.0° |
C5 | N | C7A | 108.1° | 107.7° |
C5 | N | C1 | 124.3° | 126.1° |
N | C5 | H5 | 125.3° | 125.3° |
C4 | C | C3 | 113.4° | 110.3° |
C | C4 | H41 | 109.2° | 109.5° |
C | C4 | H42 | 108.9° | 109.5° |
C4 | C | H | 109.7° | 110.4° |
C8 | N3 | C7A | 121.0° | 120.0° |
C8 | N3 | HN3 | 119.5° | 120.1° |
N3 | C8 | H8 | 116.2° | 119.9° |
N | C7A | N3 | 125.9° | 126.8° |
C7A | N | C1 | 127.6° | 126.2° |
C7A | N3 | HN3 | 119.5° | 120.0° |
N | C1 | C2 | 110.3° | 110.4° |
N | C1 | H1 | 113.4° | 110.4° |
C | C3 | C2 | 105.0° | 104.1° |
C | C3 | O3' | 108.0° | 110.5° |
C3 | C | H | 107.1° | 110.4° |
C | C3 | H3 | 113.4° | 110.5° |
C1 | C2 | C3 | 104.2° | 104.1° |
C1 | C2 | O2' | 107.9° | 110.5° |
C1 | C2 | H2 | 114.1° | 110.6° |
C2 | C1 | H1 | 108.5° | 110.4° |
C2 | C3 | O3' | 109.9° | 110.5° |
C3 | C2 | O2' | 110.3° | 110.5° |
C2 | C3 | H3 | 111.6° | 110.5° |
C3 | C2 | H2 | 111.8° | 110.5° |
O3' | C3 | H3 | 108.8° | 110.6° |
C3 | O3' | HO3' | 109.5° | 114.0° |
O2' | C2 | H2 | 108.4° | 110.4° |
C2 | O2' | HO2' | 109.5° | 114.0° |
H41 | C4 | H42 | 110.2° | 109.5° |
HN21 | N2 | HN22 | 125.3° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
OP1 | P | OP2 | O3 | 115.0° | 120.0° |
OP1 | P | OP2 | OP3 | 120.2° | 120.0° |
OP1 | P | O3 | OP3 | 122.4° | 120.0° |
OP1 | P | O3 | C4 | 62.6° | 55.0° |
OP1 | P | OP2 | HOP2 | 58.8° | 60.0° |
OP1 | P | OP3 | HOP3 | 9.8° | 179.9° |
O5 | C6 | C3A | N1 | 6.4° | 180.0° |
O5 | C6 | C3A | N2 | 179.5° | 180.0° |
O5 | C6 | C3A | C7A | 174.1° | 0.3° |
O5 | C6 | N2 | HN21 | 0.3° | 180.0° |
O5 | C6 | N2 | HN22 | 179.7° | 0.0° |
O6 | C8 | N3 | H8 | 180.0° | 180.0° |
O6 | C8 | N3 | C7A | 0.5° | 5.2° |
O6 | C8 | N3 | HN3 | 179.4° | 174.8° |
OP2 | P | O3 | OP3 | 124.7° | 120.0° |
OP2 | P | O3 | C4 | 175.5° | 175.0° |
OP2 | P | OP3 | HOP3 | 127.0° | 60.0° |
N1 | C3A | C6 | C7A | 179.5° | 179.7° |
N1 | C3A | C6 | N2 | 173.1° | 0.0° |
C3A | N1 | C5 | N | 0.0° | 0.0° |
N1 | C3A | C7A | N | 0.1° | 0.4° |
N1 | C3A | C7A | N3 | 178.6° | 180.0° |
C3A | N1 | C5 | H5 | 180.0° | 180.0° |
C5 | N1 | C3A | C6 | 179.6° | 180.0° |
C5 | N1 | C3A | C7A | 0.1° | 0.2° |
N1 | C5 | N | H5 | 180.0° | 180.0° |
N1 | C5 | N | C7A | 0.1° | 0.3° |
N1 | C5 | N | C1 | 179.1° | 180.0° |
C6 | C3A | C7A | N | 179.7° | 179.8° |
C6 | C3A | C7A | N3 | 1.9° | 0.3° |
C3A | C6 | N2 | HN21 | 179.8° | 0.0° |
C3A | C6 | N2 | HN22 | 0.2° | 180.0° |
N2 | C6 | C3A | C7A | 6.4° | 179.7° |
C6 | N2 | HN21 | HN22 | 180.0° | 180.0° |
P | O3 | C4 | C | 142.6° | 180.0° |
O3 | P | OP2 | HOP2 | 56.2° | 180.0° |
O3 | P | OP3 | HOP3 | 111.4° | 59.9° |
P | O3 | C4 | H41 | 22.6° | 60.0° |
P | O3 | C4 | H42 | 97.8° | 60.0° |
O3 | C4 | C | O | 34.0° | 69.7° |
C4 | O3 | P | OP3 | 59.8° | 65.0° |
O3 | C4 | C | H41 | 120.0° | 120.0° |
O3 | C4 | C | H42 | 119.6° | 120.0° |
O3 | C4 | C | C3 | 81.6° | 175.0° |
O3 | C4 | H41 | H42 | 119.6° | 120.0° |
O3 | C4 | C | H | 158.7° | 52.8° |
C3A | C7A | N | C5 | 0.1° | 0.4° |
C3A | C7A | N3 | C8 | 113.8° | 118.3° |
C3A | C7A | N | N3 | 178.5° | 179.5° |
C3A | C7A | N | C1 | 179.1° | 179.9° |
C3A | C7A | N3 | HN3 | 66.3° | 61.7° |
O | C | C4 | C3 | 115.6° | 115.3° |
O | C | C4 | H | 124.8° | 122.4° |
C | O | C1 | N | 146.3° | 159.4° |
O | C | C3 | H | 124.9° | 119.0° |
C | O | C1 | C2 | 31.1° | 40.6° |
O | C | C3 | C2 | 8.7° | 24.0° |
O | C | C3 | O3' | 126.0° | 142.6° |
O | C | C4 | H41 | 154.0° | 50.4° |
O | C | C4 | H42 | 85.6° | 170.4° |
O | C | C3 | H3 | 113.4° | 94.7° |
C | O | C1 | H1 | 90.2° | 78.3° |
O | C1 | N | C5 | 34.8° | 25.9° |
C1 | O | C | C4 | 145.1° | 159.3° |
O | C1 | N | C7A | 144.3° | 154.4° |
O | C1 | N | C2 | 112.3° | 115.3° |
O | C1 | N | H1 | 125.8° | 122.4° |
C1 | O | C | C3 | 24.9° | 40.6° |
O | C1 | C2 | H1 | 126.6° | 118.9° |
O | C1 | C2 | C3 | 24.1° | 24.0° |
O | C1 | C2 | O2' | 141.4° | 142.6° |
C1 | O | C | H | 94.4° | 78.3° |
O | C1 | C2 | H2 | 98.1° | 94.7° |
OP3 | P | OP2 | HOP2 | 179.0° | 60.0° |
C5 | N | C7A | C1 | 179.2° | 179.7° |
C5 | N | C7A | N3 | 178.6° | 180.0° |
C5 | N | C1 | C2 | 77.5° | 89.4° |
C5 | N | C1 | H1 | 160.6° | 148.3° |
C4 | C | C3 | H | 121.1° | 122.2° |
C4 | C | C3 | C2 | 122.7° | 142.8° |
C4 | C | C3 | O3' | 120.0° | 98.6° |
C | C4 | H41 | H42 | 119.6° | 120.0° |
C4 | C | C3 | H3 | 0.6° | 24.1° |
C8 | N3 | C7A | N | 64.4° | 61.1° |
C8 | N3 | C7A | HN3 | 180.0° | 180.0° |
C7A | N | C1 | C2 | 103.4° | 90.2° |
C7A | N | C1 | H1 | 18.5° | 32.1° |
C7A | N | C5 | H5 | 179.9° | 179.7° |
N | C7A | N3 | HN3 | 115.6° | 118.9° |
N3 | C7A | N | C1 | 0.6° | 0.3° |
C7A | N3 | C8 | H8 | 179.5° | 174.8° |
N | C1 | C2 | H1 | 124.8° | 122.3° |
N | C1 | C2 | C3 | 132.8° | 142.8° |
N | C1 | C2 | O2' | 110.0° | 98.5° |
N | C1 | C2 | H2 | 10.5° | 24.1° |
C1 | N | C5 | H5 | 0.9° | 0.0° |
C | C3 | C2 | C1 | 9.1° | 0.0° |
C | C3 | C2 | O3' | 116.0° | 118.6° |
C | C3 | C2 | H3 | 123.2° | 118.6° |
C | C3 | O3' | H3 | 123.5° | 122.7° |
C | C3 | C2 | O2' | 124.7° | 118.6° |
C3 | C | C4 | H41 | 38.4° | 65.0° |
C3 | C | C4 | H42 | 158.8° | 55.0° |
C | C3 | O3' | HO3' | 161.0° | 180.0° |
C | C3 | C2 | H2 | 114.6° | 118.8° |
C1 | C2 | C3 | O2' | 115.5° | 118.6° |
C1 | C2 | C3 | H2 | 123.7° | 118.8° |
C1 | C2 | C3 | O3' | 106.9° | 118.6° |
C1 | C2 | O2' | H2 | 124.0° | 122.7° |
C1 | C2 | C3 | H3 | 132.3° | 118.6° |
C1 | C2 | O2' | HO2' | 152.4° | 176.1° |
C2 | C3 | O3' | H3 | 122.5° | 122.7° |
C3 | C2 | O2' | H2 | 122.8° | 122.6° |
C2 | C3 | C | H | 116.2° | 95.0° |
C2 | C3 | O3' | HO3' | 84.9° | 65.3° |
C3 | C2 | O2' | HO2' | 94.4° | 61.5° |
C3 | C2 | C1 | H1 | 102.4° | 94.9° |
O3' | C3 | C2 | O2' | 8.7° | 0.0° |
O3' | C3 | C | H | 1.1° | 23.7° |
O3' | C3 | C2 | H2 | 129.4° | 122.6° |
O2' | C2 | C3 | H3 | 112.1° | 122.7° |
O2' | C2 | C1 | H1 | 14.8° | 23.8° |
H41 | C4 | C | H | 81.3° | 172.8° |
H42 | C4 | C | H | 39.1° | 67.2° |
H | C | C3 | H3 | 121.7° | 146.4° |
H3 | C3 | O3' | HO3' | 37.5° | 57.4° |
H3 | C3 | C2 | H2 | 8.6° | 0.1° |
H2 | C2 | O2' | HO2' | 28.4° | 61.2° |
H2 | C2 | C1 | H1 | 135.3° | 146.4° |
HN3 | N3 | C8 | H8 | 0.6° | 5.2° |