F7O

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O1'	C1'	sing	1.43Å	1.44Å
C1'	C2'	sing	1.53Å	1.53Å
C2'	C3'	sing	1.53Å	1.55Å
C2'	N2'	sing	1.47Å	1.49Å
C3'	O3'	sing	1.43Å	1.42Å
OP2	P	doub	1.48Å	1.49Å
O3'	P	sing	1.61Å	1.61Å
N2'	C2A	sing	1.35Å	1.33Å
O2A	C2A	doub	1.21Å	1.23Å
P	OP1	sing	1.61Å	1.50Å
C2	N3	doub	1.32Å	1.49Å	Aromatic
C2	N1	sing	1.32Å	1.48Å	Aromatic
C2A	C2B	sing	1.51Å	1.50Å
N3	C4	sing	1.33Å	1.34Å	Aromatic
N1	C6	doub	1.33Å	1.34Å	Aromatic
C4	C5	doub	1.40Å	1.33Å	Aromatic
C4	N9	sing	1.37Å	1.32Å	Aromatic
C6	C5	sing	1.41Å	1.34Å	Aromatic
C6	N6	sing	1.38Å	1.32Å
C2B	N9	sing	1.46Å	1.45Å
C5	N7	sing	1.35Å	1.34Å	Aromatic
N9	C8	sing	1.36Å	1.31Å	Aromatic
N7	C8	doub	1.30Å	1.33Å	Aromatic
P	OP3	sing	1.61Å	1.49Å
OP1	H1	sing	0.97Å	0.95Å
C3'	H2	sing	1.09Å	1.10Å
C3'	H3	sing	1.09Å	1.10Å
C2'	H4	sing	1.09Å	1.10Å
C1'	H5	sing	1.09Å	1.10Å
C1'	H6	sing	1.09Å	1.10Å
O1'	H7	sing	0.97Å	0.95Å
N2'	H8	sing	0.97Å	1.00Å
C2B	H9	sing	1.09Å	1.10Å
C2B	H10	sing	1.09Å	1.10Å
C8	H11	sing	1.08Å	1.08Å
C2	H12	sing	1.08Å	1.08Å
N6	H13	sing	0.97Å	1.00Å
N6	H14	sing	0.97Å	1.00Å
OP3	H15	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1'	C1'	C2'	104.5°	109.5°
O1'	C1'	H5	110.7°	109.5°
O1'	C1'	H6	110.7°	109.5°
C1'	O1'	H7	109.5°	114.0°
C1'	C2'	C3'	107.7°	109.5°
C1'	C2'	N2'	111.9°	109.4°
C1'	C2'	H4	108.4°	109.4°
C2'	C1'	H5	110.7°	109.5°
C2'	C1'	H6	110.7°	109.5°
C3'	C2'	N2'	111.8°	109.5°
C2'	C3'	O3'	109.4°	109.5°
C2'	C3'	H2	109.4°	109.5°
C2'	C3'	H3	109.5°	109.5°
C3'	C2'	H4	108.0°	109.5°
C2'	N2'	C2A	120.3°	120.0°
N2'	C2'	H4	108.9°	109.5°
C2'	N2'	H8	119.8°	119.9°
C3'	O3'	P	127.4°	123.0°
O3'	C3'	H2	109.5°	109.5°
O3'	C3'	H3	109.5°	109.4°
OP2	P	O3'	113.8°	109.5°
OP2	P	OP1	134.1°	109.4°
OP2	P	OP3	98.6°	109.5°
O3'	P	OP1	99.9°	109.5°
O3'	P	OP3	97.1°	109.5°
N2'	C2A	O2A	125.1°	120.0°
N2'	C2A	C2B	114.8°	120.0°
C2A	N2'	H8	119.8°	120.0°
O2A	C2A	C2B	120.0°	120.0°
OP1	P	OP3	107.4°	109.5°
P	OP1	H1	109.5°	114.0°
N3	C2	N1	110.7°	122.5°
C2	N3	C4	122.3°	120.6°
N3	C2	H12	124.7°	118.7°
C2	N1	C6	120.9°	121.1°
N1	C2	H12	124.6°	118.8°
C2A	C2B	N9	108.8°	109.5°
C2A	C2B	H9	109.7°	109.4°
C2A	C2B	H10	109.6°	109.5°
N3	C4	C5	122.2°	119.1°
N3	C4	N9	130.1°	134.9°
N1	C6	C5	123.6°	118.5°
N1	C6	N6	120.3°	120.7°
C5	C4	N9	107.7°	106.0°
C4	C5	C6	120.1°	118.2°
C4	C5	N7	107.2°	107.2°
C4	N9	C2B	120.2°	126.3°
C4	N9	C8	109.4°	107.4°
C5	C6	N6	116.0°	120.8°
C6	C5	N7	132.7°	134.7°
C6	N6	H13	109.5°	120.0°
C6	N6	H14	109.5°	120.0°
C2B	N9	C8	130.4°	126.3°
N9	C2B	H9	109.6°	109.4°
N9	C2B	H10	109.6°	109.5°
C5	N7	C8	108.6°	109.4°
N9	C8	N7	107.0°	110.0°
N9	C8	H11	126.5°	125.0°
N7	C8	H11	126.5°	125.0°
P	OP3	H15	109.5°	114.0°
H2	C3'	H3	109.5°	109.5°
H5	C1'	H6	109.5°	109.5°
H9	C2B	H10	109.5°	109.5°
H13	N6	H14	109.5°	120.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1'	C1'	C2'	H5	119.2°	120.0°
O1'	C1'	C2'	H6	119.2°	120.0°
O1'	C1'	C2'	C3'	55.4°	55.0°
O1'	C1'	C2'	N2'	178.7°	65.0°
O1'	C1'	C2'	H4	61.2°	175.0°
O1'	C1'	H5	H6	122.3°	120.0°
C1'	C2'	C3'	N2'	123.4°	120.0°
C1'	C2'	C3'	H4	116.9°	120.0°
C1'	C2'	N2'	H4	119.8°	119.9°
C1'	C2'	C3'	O3'	65.1°	55.0°
C1'	C2'	N2'	C2A	145.7°	85.0°
C1'	C2'	C3'	H2	54.9°	175.0°
C1'	C2'	C3'	H3	174.9°	65.0°
C2'	C1'	H5	H6	122.3°	120.0°
C2'	C1'	O1'	H7	180.0°	180.0°
C1'	C2'	N2'	H8	34.3°	95.0°
C3'	C2'	N2'	H4	119.3°	120.1°
C2'	C3'	O3'	H2	120.0°	120.0°
C2'	C3'	O3'	H3	120.0°	120.0°
C2'	C3'	O3'	P	175.7°	180.0°
C3'	C2'	N2'	C2A	93.4°	155.0°
C2'	C3'	H2	H3	120.0°	120.0°
C3'	C2'	C1'	H5	174.6°	175.0°
C3'	C2'	C1'	H6	63.8°	65.0°
C3'	C2'	N2'	H8	86.6°	24.9°
N2'	C2'	C3'	O3'	58.3°	65.0°
C2'	N2'	C2A	H8	180.0°	179.9°
C2'	N2'	C2A	O2A	1.9°	0.0°
C2'	N2'	C2A	C2B	178.8°	179.9°
N2'	C2'	C3'	H2	178.3°	55.0°
N2'	C2'	C3'	H3	61.7°	175.1°
N2'	C2'	C1'	H5	62.1°	55.0°
N2'	C2'	C1'	H6	59.5°	175.0°
C3'	O3'	P	OP2	27.5°	55.0°
C3'	O3'	P	OP1	175.7°	65.0°
C3'	O3'	P	OP3	75.2°	175.0°
O3'	C3'	H2	H3	120.0°	120.0°
O3'	C3'	C2'	H4	178.1°	175.0°
OP2	P	O3'	OP1	148.2°	120.0°
OP2	P	O3'	OP3	102.7°	120.0°
OP2	P	OP1	OP3	121.5°	120.0°
OP2	P	OP1	H1	0.0°	180.0°
OP2	P	OP3	H15	0.0°	59.9°
O3'	P	OP1	OP3	100.7°	120.0°
O3'	P	OP1	H1	137.8°	60.0°
P	O3'	C3'	H2	64.3°	60.0°
P	O3'	C3'	H3	55.8°	60.0°
O3'	P	OP3	H15	115.5°	179.9°
N2'	C2A	O2A	C2B	176.8°	180.0°
N2'	C2A	C2B	N9	164.1°	180.0°
C2A	N2'	C2'	H4	25.9°	34.9°
N2'	C2A	C2B	H9	44.2°	60.0°
N2'	C2A	C2B	H10	76.0°	60.0°
O2A	C2A	C2B	N9	18.8°	0.0°
O2A	C2A	N2'	H8	178.1°	180.0°
O2A	C2A	C2B	H9	138.7°	120.0°
O2A	C2A	C2B	H10	101.1°	120.0°
OP1	P	OP3	H15	141.7°	60.0°
N3	C2	N1	H12	180.0°	179.9°
N3	C2	N1	C6	5.0°	0.2°
C2	N3	C4	C5	0.6°	0.0°
C2	N3	C4	N9	178.7°	179.5°
N1	C2	N3	C4	2.4°	0.0°
C2	N1	C6	C5	6.2°	0.4°
C2	N1	C6	N6	177.3°	180.0°
C2A	C2B	N9	C4	85.3°	84.7°
C2A	C2B	N9	H9	119.9°	120.0°
C2A	C2B	N9	H10	119.9°	120.0°
C2A	C2B	N9	C8	91.7°	95.0°
C2B	C2A	N2'	H8	1.2°	0.0°
C2A	C2B	H9	H10	120.3°	120.0°
N3	C4	C5	N9	178.5°	179.7°
N3	C4	C5	C6	1.1°	0.2°
N3	C4	N9	C2B	1.0°	0.3°
N3	C4	C5	N7	178.8°	179.9°
N3	C4	N9	C8	178.6°	180.0°
C4	N3	C2	H12	177.6°	180.0°
N1	C6	C5	C4	4.0°	0.4°
N1	C6	C5	N6	176.7°	179.6°
N1	C6	C5	N7	179.0°	179.9°
C6	N1	C2	H12	174.9°	179.7°
N1	C6	N6	H13	0.0°	0.0°
N1	C6	N6	H14	120.0°	180.0°
C4	C5	C6	N7	177.0°	179.7°
C4	C5	C6	N6	179.3°	180.0°
C5	C4	N9	C2B	179.4°	179.9°
C5	C4	N9	C8	3.1°	0.4°
C4	C5	N7	C8	1.4°	0.3°
N9	C4	C5	C6	179.6°	179.9°
C4	N9	C2B	C8	176.9°	179.7°
N9	C4	C5	N7	2.7°	0.4°
C4	N9	C8	N7	2.2°	0.2°
C4	N9	C2B	H9	34.7°	35.3°
C4	N9	C2B	H10	154.9°	155.3°
C4	N9	C8	H11	177.8°	179.8°
C6	C5	N7	C8	178.6°	180.0°
C5	C6	N6	H13	176.8°	179.6°
C5	C6	N6	H14	56.8°	0.4°
N6	C6	C5	N7	2.3°	0.4°
C6	N6	H13	H14	120.0°	180.0°
C2B	N9	C8	N7	179.4°	180.0°
N9	C2B	H9	H10	120.3°	120.0°
C2B	N9	C8	H11	0.6°	0.0°
C5	N7	C8	N9	0.5°	0.1°
C5	N7	C8	H11	179.5°	180.0°
N9	C8	N7	H11	180.0°	180.0°
C8	N9	C2B	H9	148.4°	145.0°
C8	N9	C2B	H10	28.2°	25.0°
OP3	P	OP1	H1	121.5°	60.0°
H2	C3'	C2'	H4	62.0°	65.0°
H3	C3'	C2'	H4	58.1°	55.0°
H4	C2'	C1'	H5	58.0°	65.0°
H4	C2'	C1'	H6	179.6°	55.0°
H4	C2'	N2'	H8	154.1°	145.0°
H5	C1'	O1'	H7	60.8°	60.0°
H6	C1'	O1'	H7	60.8°	60.0°

Release date:	2020-11-25
Definition date:	2020-04-07
Last modified:	2020-11-20
Release status:	REL
Processing site:	PDBJ
Derived from:	7BPG