F7H
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O4' | C1' | sing | 1.43Å | 1.44Å | |
O4' | C4' | sing | 1.44Å | 1.44Å | |
C1' | N1 | sing | 1.47Å | 1.50Å | |
C1' | C2' | sing | 1.54Å | 1.53Å | |
O5' | C5' | sing | 1.43Å | 1.40Å | |
O2 | C2 | doub | 1.22Å | 1.23Å | |
C4' | C5' | sing | 1.54Å | 1.53Å | |
C4' | C3' | sing | 1.56Å | 1.51Å | |
N1 | C2 | sing | 1.35Å | 1.41Å | |
N1 | C6 | sing | 1.36Å | 1.39Å | |
C2 | N3 | sing | 1.33Å | 1.37Å | |
C6 | C5 | doub | 1.35Å | 1.37Å | |
C5' | C8' | sing | 1.53Å | 1.51Å | |
C5' | C6' | sing | 1.54Å | 1.51Å | |
N3 | C4 | doub | 1.33Å | 1.35Å | |
C2' | C3' | sing | 1.55Å | 1.53Å | |
C5 | C4 | sing | 1.41Å | 1.46Å | |
C5 | C7 | sing | 1.51Å | 1.52Å | |
C4 | N4 | sing | 1.38Å | 1.33Å | |
C3' | O3' | sing | 1.43Å | 1.43Å | |
C3' | C7' | sing | 1.55Å | 1.55Å | |
C8' | C6' | sing | 1.53Å | 1.50Å | |
C6' | C7' | sing | 1.56Å | 1.53Å | |
O5' | HO5' | sing | 0.97Å | 0.95Å | |
C4' | H4' | sing | 1.09Å | 1.10Å | |
C1' | H1' | sing | 1.09Å | 1.10Å | |
C6 | H6 | sing | 1.08Å | 1.08Å | |
C7 | H71 | sing | 1.09Å | 1.10Å | |
C7 | H72 | sing | 1.09Å | 1.10Å | |
C7 | H73 | sing | 1.09Å | 1.10Å | |
N4 | H41 | sing | 0.97Å | 1.00Å | |
N4 | H42 | sing | 0.97Å | 1.00Å | |
C2' | H2' | sing | 1.09Å | 1.10Å | |
C2' | H2'' | sing | 1.09Å | 1.10Å | |
C7' | H7' | sing | 1.09Å | 1.10Å | |
C7' | H7'' | sing | 1.09Å | 1.10Å | |
C6' | H6' | sing | 1.09Å | 1.10Å | |
C8' | H8' | sing | 1.09Å | 1.10Å | |
C8' | H8'' | sing | 1.09Å | 1.10Å | |
O3' | H1 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C1' | O4' | C4' | 110.1° | 107.7° |
O4' | C1' | N1 | 110.1° | 109.9° |
O4' | C1' | C2' | 106.8° | 107.4° |
O4' | C1' | H1' | 110.0° | 109.9° |
O4' | C4' | C5' | 110.2° | 109.1° |
O4' | C4' | C3' | 108.2° | 103.9° |
O4' | C4' | H4' | 110.8° | 113.3° |
N1 | C1' | C2' | 112.0° | 109.8° |
C1' | N1 | C2 | 117.0° | 119.8° |
C1' | N1 | C6 | 122.4° | 119.9° |
N1 | C1' | H1' | 109.1° | 109.9° |
C1' | C2' | C3' | 104.2° | 104.6° |
C2' | C1' | H1' | 108.7° | 109.9° |
C1' | C2' | H2' | 110.8° | 110.5° |
C1' | C2' | H2'' | 110.8° | 110.4° |
O5' | C5' | C4' | 117.3° | 117.2° |
O5' | C5' | C8' | 118.8° | 119.1° |
O5' | C5' | C6' | 121.2° | 121.0° |
C5' | O5' | HO5' | 109.5° | 114.0° |
O2 | C2 | N1 | 121.0° | 119.5° |
O2 | C2 | N3 | 120.6° | 119.4° |
C5' | C4' | C3' | 108.3° | 104.4° |
C4' | C5' | C8' | 119.1° | 118.2° |
C4' | C5' | C6' | 107.4° | 108.3° |
C5' | C4' | H4' | 109.6° | 112.7° |
C4' | C3' | C2' | 103.8° | 102.4° |
C4' | C3' | O3' | 107.8° | 113.8° |
C4' | C3' | C7' | 105.2° | 103.1° |
C3' | C4' | H4' | 109.8° | 112.8° |
C2 | N1 | C6 | 120.6° | 120.3° |
N1 | C2 | N3 | 118.4° | 121.1° |
N1 | C6 | C5 | 121.2° | 119.3° |
N1 | C6 | H6 | 119.4° | 120.3° |
C2 | N3 | C4 | 121.7° | 120.7° |
C6 | C5 | C4 | 116.8° | 119.0° |
C6 | C5 | C7 | 121.6° | 120.5° |
C5 | C6 | H6 | 119.4° | 120.4° |
C8' | C5' | C6' | 59.5° | 59.8° |
C5' | C8' | C6' | 60.4° | 60.3° |
C5' | C8' | H8' | 120.0° | 117.5° |
C5' | C8' | H8'' | 119.9° | 117.4° |
C5' | C6' | C8' | 60.1° | 59.9° |
C5' | C6' | C7' | 107.6° | 105.2° |
C5' | C6' | H6' | 119.3° | 121.0° |
N3 | C4 | C5 | 121.2° | 119.6° |
N3 | C4 | N4 | 116.7° | 120.2° |
C2' | C3' | O3' | 113.6° | 113.5° |
C2' | C3' | C7' | 113.8° | 109.5° |
C3' | C2' | H2' | 110.8° | 110.4° |
C3' | C2' | H2'' | 110.8° | 110.4° |
C4 | C5 | C7 | 121.7° | 120.5° |
C5 | C4 | N4 | 122.0° | 120.2° |
C5 | C7 | H71 | 109.5° | 109.4° |
C5 | C7 | H72 | 109.5° | 109.5° |
C5 | C7 | H73 | 109.5° | 109.5° |
C4 | N4 | H41 | 120.0° | 120.0° |
C4 | N4 | H42 | 120.0° | 120.0° |
O3' | C3' | C7' | 111.8° | 113.5° |
C3' | O3' | H1 | 109.5° | 114.0° |
C3' | C7' | C6' | 107.4° | 105.2° |
C3' | C7' | H7' | 110.0° | 110.4° |
C3' | C7' | H7'' | 110.0° | 110.3° |
C8' | C6' | C7' | 116.7° | 118.8° |
C8' | C6' | H6' | 119.6° | 119.8° |
C6' | C8' | H8' | 119.9° | 117.5° |
C6' | C8' | H8'' | 120.0° | 117.4° |
C6' | C7' | H7' | 110.0° | 109.9° |
C6' | C7' | H7'' | 110.0° | 110.5° |
C7' | C6' | H6' | 118.9° | 117.7° |
H71 | C7 | H72 | 109.5° | 109.5° |
H71 | C7 | H73 | 109.4° | 109.4° |
H72 | C7 | H73 | 109.5° | 109.5° |
H41 | N4 | H42 | 120.0° | 120.0° |
H2' | C2' | H2'' | 109.5° | 110.5° |
H7' | C7' | H7'' | 109.5° | 110.4° |
H8' | C8' | H8'' | 109.4° | 115.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O4' | C1' | N1 | C2' | 118.7° | 117.9° |
O4' | C1' | N1 | H1' | 120.8° | 121.0° |
O4' | C1' | C2' | H1' | 118.7° | 119.5° |
C1' | O4' | C4' | C5' | 125.3° | 148.7° |
C1' | O4' | C4' | C3' | 7.1° | 37.8° |
O4' | C1' | N1 | C2 | 166.8° | 154.6° |
O4' | C1' | N1 | C6 | 12.2° | 25.7° |
O4' | C1' | C2' | C3' | 22.6° | 3.0° |
C1' | O4' | C4' | H4' | 113.3° | 85.0° |
O4' | C1' | C2' | H2' | 96.6° | 121.7° |
O4' | C1' | C2' | H2'' | 141.8° | 115.7° |
C4' | O4' | C1' | N1 | 111.9° | 145.3° |
C4' | O4' | C1' | C2' | 9.9° | 25.9° |
O4' | C4' | C5' | O5' | 37.3° | 51.0° |
O4' | C4' | C5' | C3' | 118.1° | 110.6° |
O4' | C4' | C5' | H4' | 122.1° | 126.7° |
O4' | C4' | C3' | H4' | 121.0° | 123.1° |
O4' | C4' | C5' | C8' | 167.6° | 155.2° |
O4' | C4' | C5' | C6' | 103.3° | 90.3° |
O4' | C4' | C3' | C2' | 21.0° | 34.2° |
O4' | C4' | C3' | O3' | 141.7° | 157.1° |
O4' | C4' | C3' | C7' | 98.9° | 79.5° |
C4' | O4' | C1' | H1' | 127.8° | 93.7° |
N1 | C1' | C2' | H1' | 120.7° | 121.0° |
C1' | N1 | C2 | O2 | 3.0° | 0.0° |
C1' | N1 | C2 | C6 | 179.0° | 179.8° |
C1' | N1 | C2 | N3 | 177.1° | 179.7° |
C1' | N1 | C6 | C5 | 178.1° | 180.0° |
N1 | C1' | C2' | C3' | 98.0° | 122.5° |
C1' | N1 | C6 | H6 | 1.9° | 0.1° |
N1 | C1' | C2' | H2' | 142.8° | 118.8° |
N1 | C1' | C2' | H2'' | 21.1° | 3.7° |
C1' | C2' | C3' | C4' | 26.0° | 18.6° |
C2' | C1' | N1 | C2 | 74.5° | 87.5° |
C2' | C1' | N1 | C6 | 106.6° | 92.3° |
C1' | C2' | C3' | H2' | 119.2° | 118.8° |
C1' | C2' | C3' | H2'' | 119.1° | 118.8° |
C1' | C2' | C3' | O3' | 142.8° | 141.7° |
C1' | C2' | C3' | C7' | 87.7° | 90.4° |
C1' | C2' | H2' | H2'' | 122.4° | 122.5° |
O5' | C5' | C4' | C8' | 155.1° | 153.8° |
O5' | C5' | C4' | C6' | 140.6° | 141.3° |
O5' | C5' | C4' | C3' | 155.4° | 161.6° |
O5' | C5' | C8' | C6' | 111.3° | 111.0° |
O5' | C5' | C6' | C7' | 141.5° | 137.4° |
O5' | C5' | C4' | H4' | 84.9° | 75.7° |
O5' | C5' | C6' | H6' | 2.0° | 0.8° |
O5' | C5' | C8' | H8' | 1.7° | 3.4° |
O5' | C5' | C8' | H8'' | 139.1° | 141.4° |
O2 | C2 | N1 | N3 | 179.9° | 179.7° |
O2 | C2 | N1 | C6 | 178.0° | 179.7° |
O2 | C2 | N3 | C4 | 178.2° | 179.7° |
C5' | C4' | C3' | H4' | 119.6° | 122.6° |
C4' | C5' | C8' | C6' | 94.0° | 95.7° |
C5' | C4' | C3' | C2' | 140.4° | 148.4° |
C5' | C4' | C3' | O3' | 98.9° | 88.6° |
C5' | C4' | C3' | C7' | 20.5° | 34.7° |
C4' | C5' | C6' | C7' | 2.8° | 2.2° |
C4' | C5' | O5' | HO5' | 180.0° | 43.8° |
C4' | C5' | C6' | H6' | 136.6° | 138.7° |
C4' | C5' | C8' | H8' | 156.5° | 156.6° |
C4' | C5' | C8' | H8'' | 15.6° | 11.8° |
C3' | C4' | C5' | C8' | 49.5° | 44.7° |
C3' | C4' | C5' | C6' | 14.8° | 20.3° |
C4' | C3' | C2' | O3' | 116.8° | 123.2° |
C4' | C3' | C2' | C7' | 113.8° | 108.9° |
C4' | C3' | O3' | C7' | 115.1° | 117.5° |
C4' | C3' | C7' | C6' | 18.6° | 36.5° |
C4' | C3' | C2' | H2' | 93.1° | 100.2° |
C4' | C3' | C2' | H2'' | 145.2° | 137.4° |
C4' | C3' | C7' | H7' | 138.3° | 155.0° |
C4' | C3' | C7' | H7'' | 101.0° | 82.8° |
C4' | C3' | O3' | H1 | 180.0° | 180.0° |
C2 | N1 | C6 | C5 | 0.9° | 0.3° |
N1 | C2 | N3 | C4 | 1.7° | 0.5° |
C2 | N1 | C1' | H1' | 46.0° | 33.5° |
C2 | N1 | C6 | H6 | 179.1° | 179.8° |
C6 | N1 | C2 | N3 | 1.9° | 0.5° |
N1 | C6 | C5 | H6 | 180.0° | 179.9° |
N1 | C6 | C5 | C4 | 0.4° | 0.0° |
N1 | C6 | C5 | C7 | 179.8° | 180.0° |
C6 | N1 | C1' | H1' | 133.0° | 146.7° |
C2 | N3 | C4 | C5 | 0.5° | 0.2° |
C2 | N3 | C4 | N4 | 179.6° | 179.7° |
C6 | C5 | C4 | N3 | 0.6° | 0.0° |
C6 | C5 | C4 | C7 | 179.8° | 180.0° |
C6 | C5 | C4 | N4 | 179.3° | 180.0° |
C6 | C5 | C7 | H71 | 180.0° | 90.0° |
C6 | C5 | C7 | H72 | 60.0° | 150.0° |
C6 | C5 | C7 | H73 | 60.0° | 30.0° |
C5' | C8' | C6' | H8' | 109.6° | 107.6° |
C5' | C8' | C6' | H8'' | 109.6° | 107.5° |
C8' | C5' | C6' | C7' | 111.2° | 114.7° |
C8' | C5' | O5' | HO5' | 24.8° | 109.8° |
C8' | C5' | C4' | H4' | 70.3° | 78.1° |
C8' | C5' | C6' | H6' | 109.3° | 108.7° |
C5' | C8' | H8' | H8'' | 144.5° | 145.5° |
C5' | C6' | C7' | C3' | 9.8° | 24.1° |
C5' | C6' | C7' | H6' | 139.7° | 138.2° |
C6' | C5' | O5' | HO5' | 45.1° | 179.9° |
C6' | C5' | C4' | H4' | 134.6° | 143.0° |
C5' | C6' | C7' | H7' | 129.5° | 143.0° |
C5' | C6' | C7' | H7'' | 109.8° | 94.9° |
N3 | C4 | C5 | N4 | 179.9° | 179.9° |
N3 | C4 | C5 | C7 | 179.6° | 180.0° |
N3 | C4 | N4 | H41 | 0.0° | 179.9° |
N3 | C4 | N4 | H42 | 180.0° | 0.0° |
C2' | C3' | O3' | C7' | 130.5° | 125.8° |
C2' | C3' | C7' | C6' | 131.6° | 145.0° |
C2' | C3' | C4' | H4' | 100.0° | 88.9° |
C3' | C2' | C1' | H1' | 141.3° | 116.5° |
C3' | C2' | H2' | H2'' | 122.5° | 122.3° |
C2' | C3' | C7' | H7' | 108.7° | 96.5° |
C2' | C3' | C7' | H7'' | 11.9° | 25.7° |
C2' | C3' | O3' | H1 | 65.6° | 63.3° |
C4 | C5 | C6 | H6 | 179.6° | 179.9° |
C4 | C5 | C7 | H71 | 0.2° | 90.0° |
C4 | C5 | C7 | H72 | 119.8° | 30.0° |
C4 | C5 | C7 | H73 | 120.2° | 150.0° |
C5 | C4 | N4 | H41 | 180.0° | 0.0° |
C5 | C4 | N4 | H42 | 0.1° | 179.9° |
C7 | C5 | C4 | N4 | 0.5° | 0.1° |
C7 | C5 | C6 | H6 | 0.2° | 0.1° |
C5 | C7 | H71 | H72 | 120.0° | 120.0° |
C5 | C7 | H71 | H73 | 120.0° | 120.0° |
C5 | C7 | H72 | H73 | 120.0° | 120.0° |
C4 | N4 | H41 | H42 | 179.9° | 179.9° |
O3' | C3' | C7' | C6' | 98.1° | 87.1° |
O3' | C3' | C4' | H4' | 20.7° | 34.0° |
O3' | C3' | C2' | H2' | 23.6° | 23.0° |
O3' | C3' | C2' | H2'' | 98.1° | 99.5° |
O3' | C3' | C7' | H7' | 21.6° | 31.4° |
O3' | C3' | C7' | H7'' | 142.2° | 153.6° |
C3' | C7' | C6' | C8' | 55.0° | 39.5° |
C3' | C7' | C6' | H7' | 119.7° | 118.8° |
C3' | C7' | C6' | H7'' | 119.7° | 119.1° |
C7' | C3' | C4' | H4' | 140.1° | 157.4° |
C7' | C3' | C2' | H2' | 153.1° | 150.9° |
C7' | C3' | C2' | H2'' | 31.4° | 28.4° |
C3' | C7' | H7' | H7'' | 120.9° | 122.2° |
C3' | C7' | C6' | H6' | 149.5° | 162.4° |
C7' | C3' | O3' | H1 | 64.9° | 62.5° |
C8' | C6' | C7' | H6' | 155.5° | 158.1° |
C8' | C6' | C7' | H7' | 64.7° | 79.3° |
C8' | C6' | C7' | H7'' | 174.7° | 158.6° |
C6' | C8' | H8' | H8'' | 144.5° | 145.6° |
C6' | C7' | H7' | H7'' | 121.0° | 122.2° |
C7' | C6' | C8' | H8' | 154.6° | 160.8° |
C7' | C6' | C8' | H8'' | 13.8° | 15.9° |
H1' | C1' | C2' | H2' | 22.1° | 2.2° |
H1' | C1' | C2' | H2'' | 99.5° | 124.7° |
H71 | C7 | H72 | H73 | 120.0° | 120.0° |
H7' | C7' | C6' | H6' | 90.8° | 78.8° |
H7'' | C7' | C6' | H6' | 29.8° | 43.3° |
H6' | C6' | C8' | H8' | 0.7° | 3.2° |
H6' | C6' | C8' | H8'' | 141.6° | 141.7° |