F6H

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
OP3	P	sing	1.61Å	1.60Å
OP1	P	sing	1.61Å	1.64Å
P	O6'	sing	1.61Å	1.57Å
P	OP2	doub	1.48Å	1.56Å
C2'	N1	sing	1.46Å	1.48Å
N1	C6	sing	1.37Å	1.36Å
N1	C2	sing	1.35Å	1.34Å
C2	O2	doub	1.22Å	1.25Å
C2	N3	sing	1.35Å	1.38Å
N3	C4	sing	1.35Å	1.35Å
N3	HN3	sing	0.97Å	1.00Å
C5	C4	sing	1.42Å	1.39Å
C4	O4	doub	1.22Å	1.30Å
C6	C5	doub	1.35Å	1.37Å
C5	C7	sing	1.51Å	1.49Å
C6	H6	sing	1.08Å	1.08Å
C7	H7	sing	1.09Å	1.10Å
C7	H7A	sing	1.09Å	1.10Å
C7	H7B	sing	1.09Å	1.10Å
O5'	C1'	sing	1.43Å	1.40Å
C1'	C2'	sing	1.53Å	1.55Å
C1'	H1'	sing	1.09Å	1.10Å
C1'	H1'A	sing	1.09Å	1.10Å
C2'	C3'	sing	1.53Å	1.53Å
C2'	H2'	sing	1.09Å	1.10Å
F3'	C3'	sing	1.40Å	1.38Å
C4'	C3'	sing	1.53Å	1.54Å
C3'	H3'	sing	1.09Å	1.10Å
C5'	C4'	sing	1.53Å	1.56Å
C4'	O4'	sing	1.43Å	1.49Å
C4'	H4'	sing	1.09Å	1.10Å
O4'	HO4'	sing	0.97Å	0.95Å
C6'	C5'	sing	1.53Å	1.53Å
O5'	C5'	sing	1.43Å	1.44Å
C5'	H5'	sing	1.09Å	1.10Å
C7'	C6'	sing	1.53Å	1.53Å
C6'	O6'	sing	1.43Å	1.44Å
C6'	H6'	sing	1.09Å	1.10Å
C7'	H7'	sing	1.09Å	1.10Å
C7'	H7'A	sing	1.09Å	1.10Å
C7'	H7'B	sing	1.09Å	1.10Å
OP1	HOP1	sing	0.97Å	0.95Å
OP3	HOP3	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
OP3	P	OP1	97.8°	109.5°
OP3	P	O6'	107.6°	109.4°
OP3	P	OP2	111.8°	109.5°
P	OP3	HOP3	109.5°	114.0°
OP1	P	O6'	113.1°	109.5°
OP1	P	OP2	120.1°	109.4°
P	OP1	HOP1	109.5°	114.1°
O6'	P	OP2	105.9°	109.5°
P	O6'	C6'	121.7°	123.0°
C2'	N1	C6	122.0°	119.7°
C2'	N1	C2	117.1°	119.7°
N1	C2'	C1'	113.5°	109.5°
N1	C2'	C3'	110.4°	109.5°
N1	C2'	H2'	107.9°	109.5°
C6	N1	C2	120.9°	120.6°
N1	C6	C5	123.4°	119.7°
N1	C6	H6	118.3°	120.1°
N1	C2	O2	126.0°	119.5°
N1	C2	N3	117.7°	121.0°
O2	C2	N3	116.3°	119.5°
C2	N3	C4	121.1°	120.3°
C2	N3	HN3	119.5°	119.9°
C4	N3	HN3	119.4°	119.8°
N3	C4	C5	121.9°	119.4°
N3	C4	O4	116.0°	120.4°
C5	C4	O4	122.0°	120.3°
C4	C5	C6	114.7°	119.1°
C4	C5	C7	122.3°	120.5°
C6	C5	C7	122.5°	120.4°
C5	C6	H6	118.3°	120.2°
C5	C7	H7	109.5°	109.4°
C5	C7	H7A	109.5°	109.5°
C5	C7	H7B	109.5°	109.5°
H7	C7	H7A	109.5°	109.5°
H7	C7	H7B	109.5°	109.4°
H7A	C7	H7B	109.5°	109.5°
O5'	C1'	C2'	110.1°	109.4°
O5'	C1'	H1'	109.3°	109.5°
O5'	C1'	H1'A	109.3°	109.5°
C1'	O5'	C5'	118.0°	114.1°
C2'	C1'	H1'	109.3°	109.5°
C2'	C1'	H1'A	109.3°	109.5°
C1'	C2'	C3'	110.4°	109.1°
C1'	C2'	H2'	107.1°	109.5°
H1'	C1'	H1'A	109.5°	109.5°
C3'	C2'	H2'	107.3°	109.6°
C2'	C3'	F3'	107.2°	109.5°
C2'	C3'	C4'	113.2°	109.0°
C2'	C3'	H3'	108.4°	109.5°
F3'	C3'	C4'	109.1°	109.7°
F3'	C3'	H3'	110.6°	109.6°
C4'	C3'	H3'	108.3°	109.5°
C3'	C4'	C5'	107.7°	109.1°
C3'	C4'	O4'	110.3°	109.5°
C3'	C4'	H4'	110.5°	109.5°
C5'	C4'	O4'	106.5°	109.5°
C5'	C4'	H4'	110.3°	109.6°
C4'	C5'	C6'	114.6°	109.4°
C4'	C5'	O5'	108.3°	109.4°
C4'	C5'	H5'	108.3°	109.4°
O4'	C4'	H4'	111.2°	109.6°
C4'	O4'	HO4'	109.5°	114.0°
C6'	C5'	O5'	107.0°	109.5°
C6'	C5'	H5'	108.7°	109.5°
C5'	C6'	C7'	120.4°	109.4°
C5'	C6'	O6'	104.1°	109.5°
C5'	C6'	H6'	106.5°	109.5°
O5'	C5'	H5'	109.9°	109.5°
C7'	C6'	O6'	110.9°	109.4°
C7'	C6'	H6'	106.6°	109.5°
C6'	C7'	H7'	109.5°	109.4°
C6'	C7'	H7'A	109.5°	109.4°
C6'	C7'	H7'B	109.5°	109.4°
O6'	C6'	H6'	107.6°	109.5°
H7'	C7'	H7'A	109.4°	109.5°
H7'	C7'	H7'B	109.5°	109.5°
H7'A	C7'	H7'B	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
OP3	P	OP1	O6'	112.9°	120.0°
OP3	P	OP1	OP2	120.8°	120.0°
OP3	P	O6'	OP2	119.7°	120.0°
OP3	P	O6'	C6'	62.8°	65.1°
OP3	P	OP1	HOP1	120.8°	60.0°
OP1	P	O6'	OP2	133.4°	120.0°
OP1	P	O6'	C6'	44.1°	175.0°
OP1	P	OP3	HOP3	126.9°	60.0°
P	O6'	C6'	C5'	143.6°	120.0°
P	O6'	C6'	C7'	85.4°	120.0°
P	O6'	C6'	H6'	30.8°	0.0°
O6'	P	OP1	HOP1	126.2°	180.0°
O6'	P	OP3	HOP3	115.9°	60.0°
OP2	P	O6'	C6'	177.5°	55.0°
OP2	P	OP1	HOP1	0.0°	60.0°
OP2	P	OP3	HOP3	0.0°	180.0°
C2'	N1	C6	C2	177.7°	179.8°
C2'	N1	C2	O2	0.8°	0.3°
C2'	N1	C2	N3	178.9°	179.7°
C2'	N1	C6	C5	179.0°	179.7°
C2'	N1	C6	H6	1.0°	0.2°
N1	C2'	C1'	O5'	75.2°	62.3°
N1	C2'	C1'	C3'	124.5°	119.9°
N1	C2'	C1'	H2'	118.9°	120.1°
N1	C2'	C1'	H1'	164.7°	57.7°
N1	C2'	C1'	H1'A	44.8°	177.7°
N1	C2'	C3'	H2'	117.3°	120.2°
N1	C2'	C3'	F3'	164.2°	177.1°
N1	C2'	C3'	C4'	75.4°	62.9°
N1	C2'	C3'	H3'	44.8°	56.9°
C6	N1	C2	O2	177.0°	180.0°
C6	N1	C2	N3	3.2°	0.1°
N1	C6	C5	C4	4.1°	0.0°
N1	C6	C5	H6	180.0°	179.9°
N1	C6	C5	C7	176.3°	180.0°
C6	N1	C2'	C1'	44.8°	3.5°
C6	N1	C2'	C3'	79.8°	116.2°
C6	N1	C2'	H2'	163.2°	123.6°
N1	C2	O2	N3	179.7°	180.0°
N1	C2	N3	C4	4.5°	0.0°
N1	C2	N3	HN3	175.5°	180.0°
C2	N1	C6	C5	3.3°	0.1°
C2	N1	C6	H6	176.7°	180.0°
C2	N1	C2'	C1'	137.4°	176.3°
C2	N1	C2'	C3'	98.0°	64.1°
C2	N1	C2'	H2'	19.0°	56.1°
O2	C2	N3	C4	175.7°	180.0°
O2	C2	N3	HN3	4.3°	0.0°
C2	N3	C4	HN3	180.0°	180.0°
C2	N3	C4	C5	5.8°	0.0°
C2	N3	C4	O4	177.9°	180.0°
N3	C4	C5	O4	176.1°	180.0°
N3	C4	C5	C6	5.3°	0.0°
N3	C4	C5	C7	177.6°	180.0°
HN3	N3	C4	C5	174.2°	180.0°
HN3	N3	C4	O4	2.1°	0.0°
C4	C5	C6	C7	172.2°	180.0°
C4	C5	C6	H6	175.8°	179.9°
C4	C5	C7	H7	180.0°	0.0°
C4	C5	C7	H7A	60.0°	120.0°
C4	C5	C7	H7B	60.0°	119.9°
O4	C4	C5	C6	178.6°	179.9°
O4	C4	C5	C7	6.4°	0.1°
C6	C5	C7	H7	8.4°	180.0°
C6	C5	C7	H7A	111.7°	60.0°
C6	C5	C7	H7B	128.4°	60.1°
C7	C5	C6	H6	3.6°	0.1°
C5	C7	H7	H7A	120.0°	120.0°
C5	C7	H7	H7B	120.0°	120.0°
C5	C7	H7A	H7B	120.0°	120.1°
H7	C7	H7A	H7B	120.0°	120.0°
O5'	C1'	C2'	H1'	120.1°	120.0°
O5'	C1'	C2'	H1'A	120.1°	120.0°
O5'	C1'	H1'	H1'A	119.7°	120.1°
O5'	C1'	C2'	C3'	49.3°	57.6°
O5'	C1'	C2'	H2'	165.8°	177.6°
C1'	O5'	C5'	C4'	62.3°	61.2°
C1'	O5'	C5'	C6'	173.6°	178.8°
C1'	O5'	C5'	H5'	55.8°	58.7°
C2'	C1'	H1'	H1'A	119.7°	120.0°
C1'	C2'	C3'	H2'	116.4°	119.9°
C1'	C2'	C3'	F3'	69.5°	63.0°
C1'	C2'	C3'	C4'	51.0°	57.0°
C1'	C2'	C3'	H3'	171.1°	176.9°
C2'	C1'	O5'	C5'	58.4°	61.2°
H1'	C1'	C2'	C3'	70.8°	177.6°
H1'	C1'	C2'	H2'	45.7°	62.4°
H1'	C1'	O5'	C5'	61.7°	178.8°
H1'A	C1'	C2'	C3'	169.4°	62.4°
H1'A	C1'	C2'	H2'	74.1°	57.6°
H1'A	C1'	O5'	C5'	178.5°	58.8°
C2'	C3'	F3'	C4'	123.0°	119.6°
C2'	C3'	F3'	H3'	118.0°	120.1°
C2'	C3'	C4'	H3'	120.2°	119.8°
C2'	C3'	C4'	C5'	54.3°	57.0°
C2'	C3'	C4'	O4'	170.2°	176.9°
C2'	C3'	C4'	H4'	66.3°	62.9°
H2'	C2'	C3'	F3'	46.9°	56.9°
H2'	C2'	C3'	C4'	167.3°	176.9°
H2'	C2'	C3'	H3'	72.5°	63.2°
F3'	C3'	C4'	H3'	120.4°	120.3°
F3'	C3'	C4'	C5'	65.1°	62.9°
F3'	C3'	C4'	O4'	50.9°	57.0°
F3'	C3'	C4'	H4'	174.3°	177.2°
C3'	C4'	C5'	O4'	118.4°	119.9°
C3'	C4'	C5'	H4'	120.7°	119.9°
C3'	C4'	O4'	H4'	123.0°	120.1°
C3'	C4'	O4'	HO4'	180.0°	60.1°
C3'	C4'	C5'	C6'	175.2°	177.6°
C3'	C4'	C5'	O5'	55.8°	57.6°
C3'	C4'	C5'	H5'	63.3°	62.4°
H3'	C3'	C4'	C5'	174.5°	176.8°
H3'	C3'	C4'	O4'	69.5°	63.3°
H3'	C3'	C4'	H4'	53.9°	56.9°
C5'	C4'	O4'	H4'	120.3°	120.2°
C5'	C4'	O4'	HO4'	63.3°	179.7°
C4'	C5'	C6'	O5'	120.1°	119.9°
C4'	C5'	C6'	H5'	121.3°	120.0°
C4'	C5'	O5'	H5'	118.1°	119.9°
C4'	C5'	C6'	C7'	68.9°	180.0°
C4'	C5'	C6'	O6'	56.2°	60.0°
C4'	C5'	C6'	H6'	169.8°	60.0°
O4'	C4'	C5'	C6'	66.4°	62.5°
O4'	C4'	C5'	O5'	174.2°	177.5°
O4'	C4'	C5'	H5'	55.1°	57.5°
H4'	C4'	O4'	HO4'	57.0°	60.1°
H4'	C4'	C5'	C6'	54.4°	57.7°
H4'	C4'	C5'	O5'	64.9°	62.3°
H4'	C4'	C5'	H5'	175.9°	177.7°
C6'	C5'	O5'	H5'	117.8°	120.1°
C5'	C6'	C7'	O6'	121.8°	120.0°
C5'	C6'	C7'	H6'	121.3°	120.0°
C5'	C6'	O6'	H6'	112.8°	120.0°
C5'	C6'	C7'	H7'	180.0°	60.0°
C5'	C6'	C7'	H7'A	60.0°	60.0°
C5'	C6'	C7'	H7'B	60.0°	180.0°
O5'	C5'	C6'	C7'	171.1°	60.1°
O5'	C5'	C6'	O6'	63.9°	179.9°
O5'	C5'	C6'	H6'	49.7°	59.9°
H5'	C5'	C6'	C7'	52.4°	60.0°
H5'	C5'	C6'	O6'	177.5°	60.0°
H5'	C5'	C6'	H6'	68.9°	180.0°
C7'	C6'	O6'	H6'	116.2°	120.0°
C6'	C7'	H7'	H7'A	120.0°	119.9°
C6'	C7'	H7'	H7'B	120.0°	120.0°
C6'	C7'	H7'A	H7'B	120.0°	120.0°
O6'	C6'	C7'	H7'	58.2°	180.0°
O6'	C6'	C7'	H7'A	178.1°	60.0°
O6'	C6'	C7'	H7'B	61.9°	60.0°
H6'	C6'	C7'	H7'	58.7°	60.0°
H6'	C6'	C7'	H7'A	61.3°	180.0°
H6'	C6'	C7'	H7'B	178.7°	60.0°
H7'	C7'	H7'A	H7'B	120.0°	120.1°

Definition date:	2012-01-11
Last modified:	2012-02-03
Release status:	REL
Processing site:	RCSB
Derived from:	3V07