Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

F5Y

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C16N13sing1.46Å1.51Å
N13N14sing1.40Å1.35ÅAromatic
N13C12sing1.35Å1.34ÅAromatic
N14C15doub1.31Å1.36ÅAromatic
C26O25sing1.43Å1.46Å
C12C11doub1.37Å1.38ÅAromatic
C15C11sing1.41Å1.36ÅAromatic
C11C6sing1.48Å1.37Å
O25C24sing1.36Å1.40Å
C6C5doub1.40Å1.41ÅAromatic
C6C1sing1.39Å1.44ÅAromatic
C5C4sing1.37Å1.39ÅAromatic
C23C24doub1.38Å1.42ÅAromatic
C23C22sing1.38Å1.41ÅAromatic
C1C2doub1.39Å1.40ÅAromatic
C24C19sing1.40Å1.39ÅAromatic
C4C3doub1.40Å1.42ÅAromatic
C22C21doub1.38Å1.39ÅAromatic
C2C3sing1.41Å1.44ÅAromatic
C2C10sing1.47Å1.41Å
C19C10sing1.48Å1.42Å
C19C20doub1.39Å1.41ÅAromatic
C3C7sing1.47Å1.39Å
C10C9doub1.36Å1.38Å
C21C20sing1.38Å1.36ÅAromatic
C21S27sing1.76Å1.72Å
C7O17doub1.22Å1.26Å
C7N8sing1.35Å1.35Å
C9N8sing1.36Å1.42Å
O31S27doub1.42Å1.52Å
N8C18sing1.47Å1.50Å
S27C28sing1.81Å1.83Å
S27O30doub1.42Å1.48Å
C28C29sing1.53Å1.56Å
C29H1sing1.09Å1.10Å
C29H2sing1.09Å1.10Å
C29H3sing1.09Å1.10Å
C28H4sing1.09Å1.10Å
C28H5sing1.09Å1.10Å
C20H6sing1.08Å1.08Å
C22H7sing1.08Å1.08Å
C23H8sing1.08Å1.08Å
C26H9sing1.09Å1.10Å
C26H10sing1.09Å1.10Å
C26H11sing1.09Å1.10Å
C1H12sing1.08Å1.08Å
C9H13sing1.08Å1.08Å
C18H14sing1.09Å1.10Å
C18H15sing1.09Å1.10Å
C18H16sing1.09Å1.10Å
C4H17sing1.08Å1.08Å
C5H18sing1.08Å1.08Å
C12H19sing1.08Å1.08Å
C15H20sing1.08Å1.08Å
C16H21sing1.09Å1.10Å
C16H22sing1.09Å1.10Å
C16H23sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C16N13N14124.8°125.9°
C16N13C12126.6°125.9°
N13C16H21109.5°109.4°
N13C16H22109.5°109.4°
N13C16H23109.5°109.5°
N14N13C12108.6°108.2°
N13N14C15107.8°108.6°
N13C12C11108.6°107.7°
N13C12H19125.7°126.2°
N14C15C11108.7°108.1°
N14C15H20125.6°126.0°
C26O25C24116.9°117.0°
O25C26H9109.5°109.5°
O25C26H10109.5°109.4°
O25C26H11109.5°109.5°
C12C11C15106.3°107.5°
C12C11C6126.5°126.3°
C11C12H19125.7°126.1°
C15C11C6127.0°126.2°
C11C15H20125.7°126.0°
C11C6C5122.2°119.8°
C11C6C1122.0°119.8°
O25C24C23124.9°120.1°
O25C24C19116.4°120.2°
C5C6C1115.7°120.4°
C6C5C4122.1°120.7°
C6C5H18118.9°119.7°
C6C1C2123.7°119.3°
C6C1H12118.1°120.3°
C5C4C3122.1°119.8°
C5C4H17118.9°120.1°
C4C5H18118.9°119.6°
C24C23C22122.8°120.1°
C23C24C19118.6°119.7°
C24C23H8118.6°120.0°
C23C22C21116.5°120.3°
C23C22H7121.8°119.8°
C22C23H8118.6°120.0°
C1C2C3118.6°119.9°
C1C2C10121.1°121.9°
C2C1H12118.1°120.4°
C24C19C10122.3°120.1°
C24C19C20117.5°119.7°
C4C3C2117.7°119.9°
C4C3C7120.5°121.8°
C3C4H17119.0°120.1°
C22C21C20121.0°120.2°
C22C21S27120.1°119.9°
C21C22H7121.8°119.9°
C3C2C10120.3°118.3°
C2C3C7121.7°118.3°
C2C10C19123.8°120.4°
C2C10C9116.7°119.2°
C10C19C20120.1°120.1°
C19C10C9119.6°120.4°
C19C20C21123.5°119.9°
C19C20H6118.2°120.1°
C3C7O17124.2°120.2°
C3C7N8116.3°119.6°
C10C9N8121.1°122.2°
C10C9H13119.5°118.9°
C20C21S27118.8°119.9°
C21C20H6118.3°120.0°
C21S27O31104.9°104.3°
C21S27C28104.9°104.4°
C21S27O30111.8°104.3°
O17C7N8119.5°120.3°
C7N8C9123.9°122.5°
C7N8C18120.9°118.7°
C9N8C18115.2°118.8°
N8C9H13119.4°118.9°
O31S27C28121.0°110.5°
O31S27O30110.1°121.1°
N8C18H14109.5°109.5°
N8C18H15109.5°109.5°
N8C18H16109.5°109.5°
C28S27O30104.1°110.5°
S27C28C29105.2°109.4°
S27C28H4110.5°109.5°
S27C28H5110.6°109.4°
C28C29H1109.5°109.5°
C28C29H2109.5°109.5°
C28C29H3109.5°109.5°
C29C28H4110.5°109.5°
C29C28H5110.5°109.5°
H1C29H2109.5°109.5°
H1C29H3109.5°109.5°
H2C29H3109.5°109.4°
H4C28H5109.5°109.5°
H9C26H10109.5°109.5°
H9C26H11109.5°109.5°
H10C26H11109.5°109.5°
H14C18H15109.4°109.5°
H14C18H16109.5°109.4°
H15C18H16109.4°109.5°
H21C16H22109.5°109.5°
H21C16H23109.4°109.5°
H22C16H23109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C16N13N14C12179.8°180.0°
C16N13N14C15178.9°180.0°
C16N13C12C11179.4°179.8°
C16N13C12H190.5°0.1°
N13C16H21H22120.0°119.9°
N13C16H21H23120.0°120.0°
N13C16H22H23120.0°120.1°
N14N13C12C110.7°0.2°
N13N14C15C111.4°0.2°
N14N13C12H19179.3°179.8°
N13N14C15H20178.6°179.8°
N14N13C16H210.0°90.0°
N14N13C16H22120.0°150.0°
N14N13C16H23120.0°30.0°
C12N13N14C151.3°0.0°
N13C12C11H19180.0°180.0°
N13C12C11C150.1°0.3°
N13C12C11C6175.1°180.0°
C12N13C16H21179.8°90.0°
C12N13C16H2260.2°29.9°
C12N13C16H2359.8°150.0°
N14C15C11C120.9°0.3°
N14C15C11H20180.0°180.0°
N14C15C11C6174.3°180.0°
C26O25C24C234.8°0.1°
C26O25C24C19172.9°179.7°
O25C26H9H10120.0°119.9°
O25C26H9H11120.0°120.0°
O25C26H10H11120.0°120.0°
C12C11C15C6175.2°179.7°
C12C11C6C52.8°0.0°
C12C11C6C1173.2°180.0°
C12C11C15H20179.0°179.7°
C15C11C6C5177.0°179.6°
C15C11C6C11.0°0.4°
C15C11C12H19179.8°179.7°
C11C6C5C1176.2°180.0°
C11C6C5C4177.3°180.0°
C11C6C1C2177.0°180.0°
C11C6C1H123.0°0.0°
C11C6C5H182.7°0.0°
C6C11C12H194.9°0.0°
C6C11C15H205.8°0.0°
O25C24C23C19177.6°179.8°
O25C24C23C22179.2°180.0°
O25C24C19C102.9°0.2°
O25C24C19C20178.1°179.8°
O25C24C23H80.8°0.2°
C24O25C26H9180.0°180.0°
C24O25C26H1060.0°60.1°
C24O25C26H1160.0°60.0°
C6C5C4H18180.0°180.0°
C5C6C1C20.7°0.0°
C6C5C4C31.3°0.0°
C5C6C1H12179.3°180.0°
C6C5C4H17178.7°180.0°
C1C6C5C41.1°0.0°
C6C1C2H12180.0°180.0°
C6C1C2C30.5°0.0°
C6C1C2C10179.4°180.0°
C1C6C5H18178.9°180.0°
C5C4C3H17180.0°179.9°
C5C4C3C20.9°0.0°
C5C4C3C7178.4°180.0°
C24C23C22H8180.0°179.7°
C24C23C22C212.0°0.1°
C23C24C19C10179.3°180.0°
C23C24C19C204.1°0.4°
C24C23C22H7178.0°180.0°
C22C23C24C191.6°0.3°
C23C22C21H7180.0°180.0°
C23C22C21C202.9°0.0°
C23C22C21S27179.1°179.7°
C1C2C3C40.5°0.0°
C1C2C3C10179.9°180.0°
C1C2C10C190.3°0.0°
C1C2C3C7178.0°180.0°
C1C2C10C9179.0°179.8°
C24C19C10C269.4°105.2°
C24C19C10C20175.1°179.6°
C24C19C10C9110.0°75.0°
C24C19C20C213.4°0.4°
C24C19C20H6176.6°179.5°
C19C24C23H8178.4°180.0°
C4C3C2C7177.5°180.0°
C4C3C2C10179.3°180.0°
C4C3C7O170.2°0.1°
C4C3C7N8178.1°179.8°
C3C4C5H18178.7°180.0°
C22C21C20C190.3°0.2°
C22C21C20S27176.3°179.7°
C22C21S27O3135.9°153.6°
C22C21S27C2892.6°90.3°
C22C21S27O30155.2°25.7°
C22C21C20H6179.7°179.7°
C21C22C23H8178.0°179.8°
C3C2C10C19179.8°180.0°
C3C2C10C90.8°0.2°
C2C3C7O17177.6°180.0°
C2C3C7N80.7°0.3°
C3C2C1H12179.5°180.0°
C2C3C4H17179.1°180.0°
C2C10C19C9179.3°179.8°
C2C10C19C20115.6°75.2°
C10C2C3C71.8°0.0°
C2C10C9N81.2°0.2°
C10C2C1H120.6°0.0°
C2C10C9H13178.8°179.7°
C10C19C20C21178.7°180.0°
C19C10C9N8178.2°180.0°
C10C19C20H61.3°0.1°
C19C10C9H131.8°0.0°
C20C19C10C965.1°104.6°
C19C20C21H6180.0°179.9°
C19C20C21S27176.6°179.9°
C3C7O17N8178.3°179.7°
C3C7N8C91.4°0.3°
C3C7N8C18179.0°179.7°
C7C3C4H171.6°0.1°
C10C9N8C72.4°0.0°
C10C9N8H13180.0°180.0°
C10C9N8C18179.8°180.0°
C20C21S27O31140.5°26.1°
C20C21S27C2891.1°90.0°
C20C21S27O3021.1°154.0°
C20C21C22H7177.1°180.0°
C21S27O31C28118.0°111.7°
C21S27O31O30120.4°116.8°
C21S27C28O30117.6°111.6°
C21S27C28C2966.0°180.0°
C21S27C28H453.3°60.0°
C21S27C28H5174.7°60.0°
S27C21C20H63.4°0.0°
S27C21C22H70.9°0.3°
O17C7N8C9179.8°180.0°
O17C7N8C182.6°0.0°
C7N8C9C18177.7°180.0°
C7N8C9H13177.6°180.0°
C7N8C18H14180.0°90.0°
C7N8C18H1560.0°30.0°
C7N8C18H1660.0°150.1°
C9N8C18H142.2°90.0°
C9N8C18H15117.8°150.0°
C9N8C18H16122.2°29.9°
O31S27C28O30124.4°136.8°
O31S27C28C29176.0°68.4°
O31S27C28H464.7°171.6°
O31S27C28H556.7°51.6°
C18N8C9H130.1°0.0°
N8C18H14H15120.0°120.1°
N8C18H14H16120.0°120.0°
N8C18H15H16120.0°120.0°
S27C28C29H4119.3°120.0°
S27C28C29H5119.3°119.9°
S27C28C29H1180.0°60.0°
S27C28C29H260.0°180.0°
S27C28C29H360.0°60.1°
S27C28H4H5122.0°119.9°
O30S27C28C2951.5°68.4°
O30S27C28H4170.9°51.6°
O30S27C28H567.8°171.6°
C28C29H1H2120.0°120.0°
C28C29H1H3120.0°120.1°
C28C29H2H3120.0°120.0°
C29C28H4H5121.9°120.1°
H1C29H2H3120.0°120.0°
H1C29C28H460.7°180.0°
H1C29C28H560.7°59.9°
H2C29C28H4179.3°60.0°
H2C29C28H559.3°60.1°
H3C29C28H459.3°59.9°
H3C29C28H5179.3°180.0°
H7C22C23H82.0°0.3°
H9C26H10H11120.0°120.0°
H14C18H15H16120.0°119.9°
H17C4C5H181.3°0.1°
H21C16H22H23120.0°120.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon