F5M

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	O1	sing	1.36Å	1.33Å
C1	C2	doub	1.38Å	1.28Å	Aromatic
C1	C13	sing	1.40Å	1.50Å	Aromatic
C2	C3	sing	1.39Å	1.30Å	Aromatic
O2	C3	sing	1.35Å	1.38Å
O2	C4	sing	1.35Å	1.39Å
C3	C11	doub	1.41Å	1.49Å	Aromatic
O3	C6	doub	1.22Å	1.43Å
C4	C5	doub	1.38Å	1.40Å
C4	C9	sing	1.42Å	1.43Å
O4	C20	doub	1.21Å	1.28Å
C5	C6	sing	1.40Å	1.47Å
O5	C20	sing	1.35Å	1.28Å
C6	C7	sing	1.41Å	1.48Å
C7	C8	doub	1.36Å	1.39Å
C8	C9	sing	1.41Å	1.40Å
C9	C10	doub	1.41Å	1.51Å
C10	C11	sing	1.47Å	1.47Å
C10	C14	sing	1.47Å	1.50Å
C11	C12	sing	1.40Å	1.29Å	Aromatic
C12	C13	doub	1.36Å	1.27Å	Aromatic
C14	C15	doub	1.40Å	1.38Å	Aromatic
C14	C19	sing	1.41Å	1.50Å	Aromatic
C15	C16	sing	1.38Å	1.39Å	Aromatic
C16	C17	doub	1.39Å	1.39Å	Aromatic
C17	C18	sing	1.39Å	1.42Å	Aromatic
C17	NAB	sing	1.40Å	1.39Å
C18	C19	doub	1.39Å	1.42Å	Aromatic
C19	C20	sing	1.48Å	1.51Å
NAB	CAZ	sing	1.34Å	1.31Å
NAB	CBC	sing	1.35Å	1.32Å
CAZ	CBA	sing	1.48Å	1.52Å
CAZ	OBK	doub	1.21Å	1.26Å
CBA	CBB	doub	1.34Å	1.52Å
CBB	CBC	sing	1.48Å	1.52Å
CBC	OBJ	doub	1.21Å	1.22Å
O1	HO1	sing	0.97Å	0.95Å
C2	H2	sing	1.08Å	1.08Å
C5	H5	sing	1.08Å	1.08Å
O5	HO5	sing	0.97Å	0.95Å
C7	H7	sing	1.08Å	1.08Å
C8	H8	sing	1.08Å	1.08Å
C12	H12	sing	1.08Å	1.08Å
C13	H13	sing	1.08Å	1.08Å
C15	H15	sing	1.08Å	1.08Å
C16	H16	sing	1.08Å	1.08Å
C18	H18	sing	1.08Å	1.08Å
CBA	HBA	sing	1.08Å	1.08Å
CBB	HBB	sing	1.08Å	1.08Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1	C1	C2	127.1°	119.7°
O1	C1	C13	124.9°	119.7°
C1	O1	HO1	109.5°	113.9°
C2	C1	C13	108.0°	120.6°
C1	C2	C3	148.9°	119.9°
C1	C2	H2	105.6°	120.0°
C1	C13	C12	102.1°	120.4°
C1	C13	H13	129.0°	119.8°
C2	C3	O2	134.0°	120.3°
C2	C3	C11	103.2°	119.1°
C3	C2	H2	105.6°	120.0°
C3	O2	C4	118.7°	122.5°
O2	C3	C11	122.8°	120.5°
O2	C4	C5	116.8°	119.8°
O2	C4	C9	123.0°	121.0°
C3	C11	C10	120.1°	119.0°
C3	C11	C12	106.8°	120.2°
O3	C6	C5	111.7°	119.8°
O3	C6	C7	112.7°	119.8°
C5	C4	C9	120.2°	119.2°
C4	C5	C6	122.9°	120.0°
C4	C5	H5	118.6°	120.0°
C4	C9	C8	119.5°	120.3°
C4	C9	C10	121.3°	119.4°
O4	C20	O5	124.6°	120.0°
O4	C20	C19	119.5°	120.0°
C5	C6	C7	113.6°	120.3°
C6	C5	H5	118.6°	120.0°
O5	C20	C19	115.9°	120.0°
C20	O5	HO5	109.5°	117.1°
C6	C7	C8	122.5°	120.2°
C6	C7	H7	118.8°	120.0°
C7	C8	C9	121.3°	120.0°
C8	C7	H7	118.8°	119.9°
C7	C8	H8	119.4°	120.0°
C8	C9	C10	119.2°	120.3°
C9	C8	H8	119.4°	120.0°
C9	C10	C11	114.1°	117.6°
C9	C10	C14	121.1°	121.2°
C11	C10	C14	124.7°	121.2°
C10	C11	C12	133.0°	120.9°
C10	C14	C15	116.0°	120.2°
C10	C14	C19	127.6°	120.1°
C11	C12	C13	151.0°	119.8°
C11	C12	H12	104.5°	120.1°
C13	C12	H12	104.5°	120.1°
C12	C13	H13	129.0°	119.8°
C15	C14	C19	116.3°	119.7°
C14	C15	C16	122.2°	120.1°
C14	C15	H15	118.9°	119.9°
C14	C19	C18	119.5°	119.6°
C14	C19	C20	119.2°	120.2°
C15	C16	C17	123.5°	120.4°
C16	C15	H15	118.9°	120.0°
C15	C16	H16	118.2°	119.8°
C16	C17	C18	117.1°	120.3°
C16	C17	NAB	116.1°	119.8°
C17	C16	H16	118.2°	119.8°
C18	C17	NAB	126.8°	119.9°
C17	C18	C19	121.3°	119.9°
C17	C18	H18	119.3°	120.0°
C17	NAB	CAZ	128.9°	125.2°
C17	NAB	CBC	123.4°	125.2°
C18	C19	C20	121.2°	120.2°
C19	C18	H18	119.4°	120.0°
CAZ	NAB	CBC	107.4°	109.6°
NAB	CAZ	CBA	113.1°	108.4°
NAB	CAZ	OBK	122.9°	125.8°
NAB	CBC	CBB	115.1°	108.4°
NAB	CBC	OBJ	122.4°	125.8°
CBA	CAZ	OBK	122.9°	125.8°
CAZ	CBA	CBB	102.2°	106.8°
CAZ	CBA	HBA	128.9°	126.6°
CBA	CBB	CBC	99.6°	106.8°
CBB	CBA	HBA	128.9°	126.6°
CBA	CBB	HBB	130.2°	126.6°
CBB	CBC	OBJ	122.4°	125.9°
CBC	CBB	HBB	130.2°	126.6°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1	C1	C2	C13	179.3°	179.6°
O1	C1	C2	C3	179.7°	180.0°
O1	C1	C13	C12	177.9°	179.7°
O1	C1	C2	H2	0.3°	0.1°
O1	C1	C13	H13	2.1°	0.1°
C1	C2	C3	H2	180.0°	179.9°
C1	C2	C3	O2	177.8°	180.0°
C1	C2	C3	C11	1.6°	0.1°
C2	C1	C13	C12	1.5°	0.6°
C2	C1	O1	HO1	180.0°	90.0°
C2	C1	C13	H13	178.5°	179.7°
C13	C1	C2	C3	0.4°	0.3°
C1	C13	C12	C11	3.4°	0.6°
C1	C13	C12	H13	180.0°	179.7°
C13	C1	O1	HO1	0.8°	90.3°
C13	C1	C2	H2	179.6°	179.7°
C1	C13	C12	H12	176.6°	179.7°
C2	C3	O2	C11	179.3°	179.9°
C2	C3	O2	C4	179.0°	180.0°
C2	C3	C11	C10	177.5°	180.0°
C2	C3	C11	C12	0.5°	0.1°
C3	O2	C4	C5	180.0°	180.0°
C3	O2	C4	C9	0.2°	0.0°
O2	C3	C11	C10	1.9°	0.1°
O2	C3	C11	C12	178.9°	180.0°
O2	C3	C2	H2	2.1°	0.1°
C4	O2	C3	C11	0.3°	0.1°
O2	C4	C5	C9	179.9°	180.0°
O2	C4	C5	C6	177.9°	180.0°
O2	C4	C9	C8	180.0°	180.0°
O2	C4	C9	C10	1.1°	0.1°
O2	C4	C5	H5	2.1°	0.0°
C3	C11	C10	C9	2.9°	0.0°
C3	C11	C10	C12	176.1°	179.9°
C3	C11	C10	C14	177.9°	179.9°
C3	C11	C12	C13	2.3°	0.3°
C11	C3	C2	H2	178.5°	180.0°
C3	C11	C12	H12	177.7°	180.0°
O3	C6	C5	C4	132.4°	180.0°
O3	C6	C5	C7	128.9°	180.0°
O3	C6	C7	C8	131.7°	180.0°
O3	C6	C5	H5	47.6°	0.0°
O3	C6	C7	H7	48.3°	0.0°
C4	C5	C6	H5	180.0°	180.0°
C4	C5	C6	C7	3.6°	0.0°
C5	C4	C9	C8	0.2°	0.0°
C5	C4	C9	C10	178.8°	179.9°
C9	C4	C5	C6	2.0°	0.0°
C4	C9	C8	C7	0.3°	0.0°
C4	C9	C8	C10	179.0°	179.9°
C4	C9	C10	C11	2.5°	0.1°
C4	C9	C10	C14	177.7°	180.0°
C9	C4	C5	H5	178.1°	180.0°
C4	C9	C8	H8	179.7°	180.0°
O4	C20	O5	C19	179.3°	179.9°
O4	C20	C19	C14	103.1°	0.1°
O4	C20	C19	C18	79.3°	179.7°
O4	C20	O5	HO5	0.0°	0.0°
C5	C6	C7	C8	3.4°	0.0°
C5	C6	C7	H7	176.7°	180.0°
O5	C20	C19	C14	77.5°	180.0°
O5	C20	C19	C18	100.0°	0.2°
C6	C7	C8	H7	180.0°	180.0°
C6	C7	C8	C9	1.6°	0.0°
C7	C6	C5	H5	176.5°	180.0°
C6	C7	C8	H8	178.4°	180.0°
C7	C8	C9	H8	180.0°	180.0°
C7	C8	C9	C10	178.7°	179.9°
C8	C9	C10	C11	178.5°	180.0°
C8	C9	C10	C14	3.3°	0.1°
C9	C8	C7	H7	178.4°	180.0°
C9	C10	C11	C14	175.0°	179.9°
C9	C10	C11	C12	179.0°	179.9°
C9	C10	C14	C15	109.8°	105.0°
C9	C10	C14	C19	66.4°	75.2°
C10	C9	C8	H8	1.3°	0.1°
C10	C11	C12	C13	174.2°	179.7°
C11	C10	C14	C15	64.9°	75.1°
C11	C10	C14	C19	118.9°	104.7°
C10	C11	C12	H12	5.8°	0.1°
C14	C10	C11	C12	6.0°	0.0°
C10	C14	C15	C19	176.6°	179.8°
C10	C14	C15	C16	177.4°	180.0°
C10	C14	C19	C18	178.0°	179.7°
C10	C14	C19	C20	4.3°	0.1°
C10	C14	C15	H15	2.6°	0.0°
C11	C12	C13	H12	180.0°	179.7°
C11	C12	C13	H13	176.6°	179.7°
C14	C15	C16	H15	180.0°	180.0°
C14	C15	C16	C17	0.3°	0.0°
C15	C14	C19	C18	1.9°	0.5°
C15	C14	C19	C20	179.5°	179.7°
C14	C15	C16	H16	179.8°	180.0°
C19	C14	C15	C16	0.8°	0.3°
C14	C19	C18	C17	1.9°	0.5°
C14	C19	C18	C20	177.6°	179.8°
C19	C14	C15	H15	179.2°	179.7°
C14	C19	C18	H18	178.1°	179.8°
C15	C16	C17	H16	180.0°	180.0°
C15	C16	C17	C18	0.3°	0.1°
C15	C16	C17	NAB	179.0°	180.0°
C16	C17	C18	NAB	179.2°	179.9°
C16	C17	C18	C19	0.8°	0.3°
C16	C17	NAB	CAZ	173.1°	0.0°
C16	C17	NAB	CBC	0.4°	179.7°
C17	C16	C15	H15	179.7°	180.0°
C16	C17	C18	H18	179.2°	180.0°
C17	C18	C19	H18	180.0°	179.7°
C17	C18	C19	C20	179.5°	179.6°
C18	C17	NAB	CAZ	7.6°	179.9°
C18	C17	NAB	CBC	179.7°	0.3°
C18	C17	C16	H16	179.7°	179.9°
NAB	C17	C18	C19	179.9°	179.8°
C17	NAB	CAZ	CBC	173.6°	179.8°
C17	NAB	CAZ	CBA	173.2°	180.0°
C17	NAB	CAZ	OBK	18.5°	0.0°
C17	NAB	CBC	CBB	177.8°	179.9°
C17	NAB	CBC	OBJ	5.9°	0.0°
NAB	C17	C16	H16	0.9°	0.0°
NAB	C17	C18	H18	0.1°	0.1°
C19	C20	O5	HO5	179.3°	179.9°
C20	C19	C18	H18	0.5°	0.1°
NAB	CAZ	CBA	OBK	168.4°	180.0°
NAB	CAZ	CBA	CBB	17.0°	0.0°
CAZ	NAB	CBC	CBB	3.8°	0.4°
CAZ	NAB	CBC	OBJ	179.9°	179.7°
NAB	CAZ	CBA	HBA	163.0°	180.0°
CBC	NAB	CAZ	CBA	13.2°	0.2°
CBC	NAB	CAZ	OBK	155.2°	179.7°
NAB	CBC	CBB	CBA	6.6°	0.4°
NAB	CBC	CBB	OBJ	176.3°	179.9°
NAB	CBC	CBB	HBB	173.4°	179.8°
CAZ	CBA	CBB	HBA	180.0°	180.0°
CAZ	CBA	CBB	CBC	12.4°	0.2°
CAZ	CBA	CBB	HBB	167.6°	180.0°
OBK	CAZ	CBA	CBB	151.4°	180.0°
OBK	CAZ	CBA	HBA	28.6°	0.1°
CBA	CBB	CBC	HBB	180.0°	179.8°
CBA	CBB	CBC	OBJ	169.8°	179.7°
CBC	CBB	CBA	HBA	167.6°	179.8°
OBJ	CBC	CBB	HBB	10.2°	0.1°
H7	C7	C8	H8	1.6°	0.0°
H12	C12	C13	H13	3.4°	0.1°
H15	C15	C16	H16	0.3°	0.0°
HBA	CBA	CBB	HBB	12.4°	0.0°

Definition date:	2010-04-13
Last modified:	2021-03-01
Release status:	REL
Processing site:	PDBJ
Derived from:	3M2J