F4Q
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O1P | P | doub | 1.48Å | 1.48Å | |
| O4' | C1' | sing | 1.43Å | 1.43Å | |
| O4' | C4' | sing | 1.44Å | 1.44Å | |
| P | O2P | sing | 1.61Å | 1.48Å | |
| P | O5' | sing | 1.61Å | 1.61Å | |
| C1' | N9 | sing | 1.47Å | 1.48Å | |
| C1' | C2' | sing | 1.54Å | 1.52Å | |
| N3 | C2 | doub | 1.31Å | 1.35Å | |
| N3 | C4 | sing | 1.34Å | 1.37Å | |
| N2 | C2 | sing | 1.37Å | 1.34Å | |
| C2 | N1 | sing | 1.36Å | 1.39Å | |
| N9 | C4 | sing | 1.37Å | 1.37Å | Aromatic |
| N9 | C8 | sing | 1.36Å | 1.37Å | Aromatic |
| C4 | C5 | doub | 1.40Å | 1.38Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.31Å | Aromatic |
| N1 | C6 | sing | 1.35Å | 1.41Å | |
| C5 | C6 | sing | 1.41Å | 1.44Å | |
| C5 | N7 | sing | 1.36Å | 1.39Å | Aromatic |
| C6 | O6 | doub | 1.22Å | 1.23Å | |
| O5' | C5' | sing | 1.43Å | 1.41Å | |
| C4' | C5' | sing | 1.54Å | 1.52Å | |
| C4' | C3' | sing | 1.56Å | 1.52Å | |
| C2' | C3' | sing | 1.54Å | 1.52Å | |
| C5' | C6' | sing | 1.54Å | 1.50Å | |
| C5' | C8' | sing | 1.53Å | 1.50Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | C7' | sing | 1.55Å | 1.55Å | |
| C6' | C8' | sing | 1.53Å | 1.50Å | |
| C6' | C7' | sing | 1.53Å | 1.52Å | |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| O2P | H3 | sing | 0.97Å | 0.95Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| N1 | H1 | sing | 0.97Å | 1.00Å | |
| N2 | H22 | sing | 0.97Å | 1.00Å | |
| N2 | H21 | sing | 0.97Å | 1.00Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C2' | H2'' | sing | 1.09Å | 1.10Å | |
| C7' | H7' | sing | 1.09Å | 1.10Å | |
| C7' | H7'' | sing | 1.09Å | 1.10Å | |
| C6' | H6' | sing | 1.09Å | 1.10Å | |
| C8' | H8' | sing | 1.09Å | 1.10Å | |
| C8' | H8'' | sing | 1.09Å | 1.10Å | |
| O3' | H4 | sing | 0.97Å | 0.95Å | |
| P | OP3 | sing | 1.61Å | 1.63Å | |
| OP3 | H6 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1P | P | O2P | 119.6° | 109.5° |
| O1P | P | O5' | 108.0° | 109.5° |
| O1P | P | OP3 | 108.5° | 109.5° |
| C1' | O4' | C4' | 110.0° | 107.7° |
| O4' | C1' | N9 | 109.0° | 109.9° |
| O4' | C1' | C2' | 107.4° | 107.4° |
| O4' | C1' | H1' | 110.8° | 109.9° |
| O4' | C4' | C5' | 109.0° | 109.0° |
| O4' | C4' | C3' | 108.5° | 103.9° |
| O4' | C4' | H4' | 111.1° | 113.3° |
| O2P | P | O5' | 108.4° | 109.4° |
| P | O2P | H3 | 109.5° | 114.0° |
| O2P | P | OP3 | 107.8° | 109.5° |
| P | O5' | C5' | 121.8° | 123.0° |
| O5' | P | OP3 | 103.4° | 109.4° |
| N9 | C1' | C2' | 110.1° | 109.9° |
| C1' | N9 | C4 | 125.2° | 126.3° |
| C1' | N9 | C8 | 129.4° | 126.2° |
| N9 | C1' | H1' | 110.0° | 109.8° |
| C1' | C2' | C3' | 104.6° | 104.6° |
| C2' | C1' | H1' | 109.4° | 109.9° |
| C1' | C2' | H2' | 110.7° | 110.4° |
| C1' | C2' | H2'' | 110.7° | 110.4° |
| C2 | N3 | C4 | 113.0° | 121.1° |
| N3 | C2 | N2 | 120.1° | 119.0° |
| N3 | C2 | N1 | 123.0° | 121.9° |
| N3 | C4 | N9 | 126.0° | 134.2° |
| N3 | C4 | C5 | 127.7° | 119.7° |
| N2 | C2 | N1 | 116.9° | 119.1° |
| C2 | N2 | H22 | 120.0° | 119.9° |
| C2 | N2 | H21 | 120.0° | 120.0° |
| C2 | N1 | C6 | 124.8° | 120.3° |
| C2 | N1 | H1 | 117.6° | 119.8° |
| C4 | N9 | C8 | 105.4° | 107.5° |
| N9 | C4 | C5 | 106.3° | 106.1° |
| N9 | C8 | N7 | 114.3° | 109.8° |
| N9 | C8 | H8 | 122.9° | 125.1° |
| C4 | C5 | C6 | 119.5° | 118.7° |
| C4 | C5 | N7 | 110.3° | 107.2° |
| C8 | N7 | C5 | 103.7° | 109.3° |
| N7 | C8 | H8 | 122.9° | 125.1° |
| N1 | C6 | C5 | 112.0° | 118.3° |
| N1 | C6 | O6 | 120.1° | 120.8° |
| C6 | N1 | H1 | 117.6° | 119.9° |
| C6 | C5 | N7 | 130.2° | 134.1° |
| C5 | C6 | O6 | 127.9° | 120.9° |
| O5' | C5' | C4' | 118.7° | 117.2° |
| O5' | C5' | C6' | 118.4° | 121.0° |
| O5' | C5' | C8' | 120.0° | 119.1° |
| C5' | C4' | C3' | 108.4° | 104.4° |
| C4' | C5' | C6' | 108.3° | 107.1° |
| C4' | C5' | C8' | 116.9° | 119.0° |
| C5' | C4' | H4' | 109.9° | 112.7° |
| C4' | C3' | C2' | 104.0° | 102.5° |
| C4' | C3' | O3' | 110.1° | 113.8° |
| C4' | C3' | C7' | 105.8° | 103.1° |
| C3' | C4' | H4' | 109.9° | 112.8° |
| C2' | C3' | O3' | 111.8° | 113.5° |
| C2' | C3' | C7' | 113.8° | 109.4° |
| C3' | C2' | H2' | 110.7° | 110.4° |
| C3' | C2' | H2'' | 110.7° | 110.4° |
| C6' | C5' | C8' | 59.9° | 59.8° |
| C5' | C6' | C8' | 60.0° | 59.9° |
| C5' | C6' | C7' | 108.2° | 106.8° |
| C5' | C6' | H6' | 119.2° | 121.0° |
| C5' | C8' | C6' | 60.1° | 60.3° |
| C5' | C8' | H8' | 120.0° | 117.4° |
| C5' | C8' | H8'' | 120.0° | 117.5° |
| O3' | C3' | C7' | 110.9° | 113.5° |
| C3' | O3' | H4 | 109.5° | 114.0° |
| C3' | C7' | C6' | 107.7° | 105.4° |
| C3' | C7' | H7' | 109.9° | 110.4° |
| C3' | C7' | H7'' | 109.9° | 110.4° |
| C8' | C6' | C7' | 116.8° | 118.8° |
| C8' | C6' | H6' | 119.3° | 119.1° |
| C6' | C8' | H8' | 120.0° | 117.5° |
| C6' | C8' | H8'' | 120.0° | 117.5° |
| C6' | C7' | H7' | 109.9° | 111.0° |
| C6' | C7' | H7'' | 109.9° | 109.2° |
| C7' | C6' | H6' | 118.9° | 117.5° |
| H22 | N2 | H21 | 120.0° | 120.1° |
| H2' | C2' | H2'' | 109.5° | 110.4° |
| H7' | C7' | H7'' | 109.4° | 110.4° |
| H8' | C8' | H8'' | 109.5° | 115.5° |
| P | OP3 | H6 | 109.5° | 113.9° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1P | P | O2P | O5' | 124.4° | 120.0° |
| O1P | P | O2P | OP3 | 124.4° | 120.1° |
| O1P | P | O5' | OP3 | 114.8° | 120.0° |
| O1P | P | O5' | C5' | 68.2° | 55.0° |
| O1P | P | O2P | H3 | 0.0° | 179.9° |
| O1P | P | OP3 | H6 | 0.0° | 60.0° |
| O4' | C1' | N9 | C2' | 117.6° | 117.9° |
| O4' | C1' | N9 | H1' | 121.6° | 121.0° |
| O4' | C1' | C2' | H1' | 120.3° | 119.5° |
| O4' | C1' | N9 | C4 | 172.2° | 156.5° |
| O4' | C1' | N9 | C8 | 8.2° | 23.5° |
| C1' | O4' | C4' | C5' | 118.2° | 148.7° |
| C1' | O4' | C4' | C3' | 0.3° | 37.8° |
| O4' | C1' | C2' | C3' | 22.8° | 3.0° |
| C1' | O4' | C4' | H4' | 120.6° | 85.0° |
| O4' | C1' | C2' | H2' | 96.4° | 121.8° |
| O4' | C1' | C2' | H2'' | 142.0° | 115.8° |
| C4' | O4' | C1' | N9 | 105.1° | 145.4° |
| C4' | O4' | C1' | C2' | 14.2° | 25.9° |
| O4' | C4' | C5' | O5' | 28.8° | 51.0° |
| O4' | C4' | C5' | C3' | 117.9° | 110.5° |
| O4' | C4' | C5' | H4' | 122.0° | 126.7° |
| O4' | C4' | C3' | H4' | 121.7° | 123.1° |
| O4' | C4' | C3' | C2' | 14.4° | 34.2° |
| O4' | C4' | C5' | C6' | 109.9° | 88.8° |
| O4' | C4' | C5' | C8' | 174.8° | 153.3° |
| O4' | C4' | C3' | O3' | 134.4° | 157.1° |
| O4' | C4' | C3' | C7' | 105.8° | 79.5° |
| C4' | O4' | C1' | H1' | 133.7° | 93.7° |
| O2P | P | O5' | OP3 | 114.2° | 120.0° |
| O2P | P | O5' | C5' | 62.8° | 65.0° |
| O2P | P | OP3 | H6 | 130.8° | 60.1° |
| P | O5' | C5' | C4' | 77.7° | 31.0° |
| P | O5' | C5' | C6' | 147.7° | 165.0° |
| P | O5' | C5' | C8' | 78.0° | 124.7° |
| O5' | P | O2P | H3 | 124.3° | 60.0° |
| O5' | P | OP3 | H6 | 114.5° | 180.0° |
| N9 | C1' | C2' | H1' | 121.0° | 121.0° |
| C1' | N9 | C4 | N3 | 0.2° | 0.3° |
| C1' | N9 | C4 | C8 | 179.7° | 180.0° |
| C1' | N9 | C4 | C5 | 179.9° | 179.7° |
| C1' | N9 | C8 | N7 | 180.0° | 180.0° |
| N9 | C1' | C2' | C3' | 95.8° | 122.5° |
| C1' | N9 | C8 | H8 | 0.0° | 0.2° |
| N9 | C1' | C2' | H2' | 145.0° | 118.7° |
| N9 | C1' | C2' | H2'' | 23.4° | 3.7° |
| C2' | C1' | N9 | C4 | 70.2° | 85.6° |
| C2' | C1' | N9 | C8 | 109.5° | 94.4° |
| C1' | C2' | C3' | C4' | 22.1° | 18.6° |
| C1' | C2' | C3' | H2' | 119.2° | 118.8° |
| C1' | C2' | C3' | H2'' | 119.2° | 118.8° |
| C1' | C2' | C3' | O3' | 140.9° | 141.8° |
| C1' | C2' | C3' | C7' | 92.5° | 90.4° |
| C1' | C2' | H2' | H2'' | 122.3° | 122.4° |
| N3 | C2 | N2 | N1 | 179.8° | 179.5° |
| C2 | N3 | C4 | N9 | 178.3° | 179.7° |
| C2 | N3 | C4 | C5 | 1.8° | 0.9° |
| N3 | C2 | N1 | C6 | 0.3° | 0.4° |
| N3 | C2 | N1 | H1 | 179.7° | 179.9° |
| N3 | C2 | N2 | H22 | 0.0° | 179.5° |
| N3 | C2 | N2 | H21 | 180.0° | 0.5° |
| C4 | N3 | C2 | N2 | 177.8° | 179.6° |
| C4 | N3 | C2 | N1 | 2.1° | 0.9° |
| N3 | C4 | N9 | C5 | 179.9° | 179.5° |
| N3 | C4 | N9 | C8 | 179.9° | 179.8° |
| N3 | C4 | C5 | C6 | 0.2° | 0.4° |
| N3 | C4 | C5 | N7 | 180.0° | 180.0° |
| N2 | C2 | N1 | C6 | 179.5° | 179.9° |
| N2 | C2 | N1 | H1 | 0.5° | 0.4° |
| C2 | N2 | H22 | H21 | 180.0° | 180.0° |
| C2 | N1 | C6 | H1 | 180.0° | 179.6° |
| C2 | N1 | C6 | C5 | 1.7° | 0.0° |
| C2 | N1 | C6 | O6 | 178.4° | 180.0° |
| N1 | C2 | N2 | H22 | 179.8° | 0.0° |
| N1 | C2 | N2 | H21 | 0.2° | 180.0° |
| C4 | N9 | C8 | N7 | 0.3° | 0.0° |
| N9 | C4 | C5 | C6 | 179.6° | 180.0° |
| N9 | C4 | C5 | N7 | 0.1° | 0.4° |
| C4 | N9 | C8 | H8 | 179.7° | 179.8° |
| C4 | N9 | C1' | H1' | 50.5° | 35.5° |
| C8 | N9 | C4 | C5 | 0.2° | 0.3° |
| N9 | C8 | N7 | H8 | 180.0° | 179.8° |
| N9 | C8 | N7 | C5 | 0.3° | 0.2° |
| C8 | N9 | C1' | H1' | 129.8° | 144.5° |
| C4 | C5 | N7 | C8 | 0.1° | 0.4° |
| C4 | C5 | C6 | N1 | 1.9° | 0.0° |
| C4 | C5 | C6 | N7 | 179.6° | 179.4° |
| C4 | C5 | C6 | O6 | 178.1° | 180.0° |
| C8 | N7 | C5 | C6 | 179.8° | 179.9° |
| N1 | C6 | C5 | O6 | 179.9° | 180.0° |
| N1 | C6 | C5 | N7 | 178.4° | 179.4° |
| C5 | C6 | N1 | H1 | 178.3° | 179.6° |
| N7 | C5 | C6 | O6 | 1.5° | 0.5° |
| C5 | N7 | C8 | H8 | 179.7° | 180.0° |
| O6 | C6 | N1 | H1 | 1.7° | 0.3° |
| O5' | C5' | C4' | C6' | 138.7° | 139.8° |
| O5' | C5' | C4' | C8' | 156.5° | 155.7° |
| O5' | C5' | C4' | C3' | 146.7° | 161.6° |
| O5' | C5' | C6' | C8' | 110.1° | 107.9° |
| O5' | C5' | C6' | C7' | 138.9° | 138.1° |
| O5' | C5' | C4' | H4' | 93.2° | 75.6° |
| O5' | C5' | C6' | H6' | 1.2° | 0.0° |
| O5' | C5' | C8' | H8' | 2.1° | 3.4° |
| O5' | C5' | C8' | H8'' | 143.1° | 141.5° |
| C5' | O5' | P | OP3 | 176.9° | 175.0° |
| C5' | C4' | C3' | H4' | 120.1° | 122.7° |
| C5' | C4' | C3' | C2' | 132.7° | 148.4° |
| C4' | C5' | C6' | C8' | 111.1° | 114.1° |
| C5' | C4' | C3' | O3' | 107.4° | 88.6° |
| C5' | C4' | C3' | C7' | 12.5° | 34.8° |
| C4' | C5' | C6' | C7' | 0.1° | 0.1° |
| C4' | C5' | C6' | H6' | 140.0° | 138.0° |
| C4' | C5' | C8' | H8' | 154.1° | 158.6° |
| C4' | C5' | C8' | H8'' | 13.1° | 13.8° |
| C4' | C3' | C2' | O3' | 118.8° | 123.2° |
| C4' | C3' | C2' | C7' | 114.6° | 108.9° |
| C3' | C4' | C5' | C6' | 8.0° | 21.7° |
| C3' | C4' | C5' | C8' | 56.8° | 42.7° |
| C4' | C3' | O3' | C7' | 116.7° | 117.5° |
| C4' | C3' | C7' | C6' | 12.4° | 35.1° |
| C4' | C3' | C2' | H2' | 97.1° | 100.2° |
| C4' | C3' | C2' | H2'' | 141.4° | 137.3° |
| C4' | C3' | C7' | H7' | 132.1° | 155.0° |
| C4' | C3' | C7' | H7'' | 107.4° | 82.8° |
| C4' | C3' | O3' | H4 | 180.0° | 180.0° |
| C2' | C3' | O3' | C7' | 128.2° | 125.8° |
| C2' | C3' | C7' | C6' | 126.0° | 143.6° |
| C2' | C3' | C4' | H4' | 107.2° | 88.9° |
| C3' | C2' | C1' | H1' | 143.2° | 116.5° |
| C3' | C2' | H2' | H2'' | 122.3° | 122.4° |
| C2' | C3' | C7' | H7' | 114.3° | 96.5° |
| C2' | C3' | C7' | H7'' | 6.2° | 25.7° |
| C2' | C3' | O3' | H4 | 64.9° | 63.3° |
| C5' | C6' | C7' | C3' | 7.7° | 21.9° |
| C5' | C6' | C8' | C7' | 96.4° | 93.6° |
| C5' | C6' | C8' | H6' | 108.8° | 111.0° |
| C5' | C6' | C7' | H6' | 140.2° | 139.8° |
| C6' | C5' | C4' | H4' | 128.1° | 144.5° |
| C5' | C6' | C7' | H7' | 127.4° | 141.4° |
| C5' | C6' | C7' | H7'' | 112.0° | 96.7° |
| C6' | C5' | C8' | H8' | 109.5° | 107.6° |
| C6' | C5' | C8' | H8'' | 109.5° | 107.6° |
| C8' | C5' | C4' | H4' | 63.2° | 80.1° |
| C5' | C8' | H8' | H8'' | 144.7° | 145.5° |
| O3' | C3' | C7' | C6' | 107.0° | 88.6° |
| O3' | C3' | C4' | H4' | 12.7° | 34.0° |
| O3' | C3' | C2' | H2' | 21.7° | 23.0° |
| O3' | C3' | C2' | H2'' | 99.8° | 99.5° |
| O3' | C3' | C7' | H7' | 12.8° | 31.3° |
| O3' | C3' | C7' | H7'' | 133.3° | 153.6° |
| C3' | C7' | C6' | C8' | 57.2° | 42.5° |
| C3' | C7' | C6' | H7' | 119.7° | 119.5° |
| C3' | C7' | C6' | H7'' | 119.7° | 118.6° |
| C7' | C3' | C4' | H4' | 132.6° | 157.4° |
| C7' | C3' | C2' | H2' | 148.3° | 150.8° |
| C7' | C3' | C2' | H2'' | 26.8° | 28.4° |
| C3' | C7' | H7' | H7'' | 120.8° | 122.3° |
| C3' | C7' | C6' | H6' | 147.9° | 161.7° |
| C7' | C3' | O3' | H4 | 63.3° | 62.5° |
| C8' | C6' | C7' | H6' | 154.8° | 155.8° |
| C8' | C6' | C7' | H7' | 62.5° | 77.0° |
| C8' | C6' | C7' | H7'' | 177.0° | 161.1° |
| C6' | C8' | H8' | H8'' | 144.7° | 145.5° |
| C6' | C7' | H7' | H7'' | 120.8° | 121.2° |
| C7' | C6' | C8' | H8' | 154.1° | 158.9° |
| C7' | C6' | C8' | H8'' | 13.0° | 14.0° |
| H3 | O2P | P | OP3 | 124.4° | 60.0° |
| H1' | C1' | C2' | H2' | 23.9° | 2.3° |
| H1' | C1' | C2' | H2'' | 97.6° | 124.7° |
| H7' | C7' | C6' | H6' | 92.3° | 78.8° |
| H7'' | C7' | C6' | H6' | 28.2° | 43.1° |
| H6' | C6' | C8' | H8' | 0.7° | 3.5° |
| H6' | C6' | C8' | H8'' | 141.7° | 141.4° |
