Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

F3M

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NC4sing1.47Å1.45Å
C1O1sing1.34Å1.27Å
C1C2sing1.51Å1.53Å
C1O2doub1.21Å1.26Å
F1C5sing1.40Å1.33Å
O1CAsing1.45Å1.26Å
C2C3sing1.53Å1.54Å
F2C5sing1.40Å1.32Å
C3O3sing1.43Å1.42Å
C3C4sing1.53Å1.54Å
F3C5sing1.40Å1.32Å
C4C5sing1.53Å1.54Å
NHNsing1.01Å1.00Å
NHNAsing1.01Å1.00Å
C2H2sing1.09Å1.10Å
C2H2Asing1.09Å1.10Å
C3H3sing1.09Å1.10Å
O3HO3sing0.97Å0.95Å
C4H4sing1.09Å1.10Å
CAHAsing1.09Å1.10Å
CAHAAsing1.09Å1.10Å
CAHABsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
NC4C3109.4°109.5°
NC4C5107.2°109.5°
C4NHN109.5°111.0°
C4NHNA109.5°111.0°
NC4H4113.1°109.5°
O1C1C2120.3°120.0°
O1C1O2123.3°120.0°
C1O1CA113.3°117.0°
C2C1O2116.4°120.0°
C1C2C3115.2°109.5°
C1C2H2107.6°109.5°
C1C2H2A107.6°109.5°
F1C5F2109.0°109.5°
F1C5F3107.1°109.5°
F1C5C4112.2°109.5°
O1CAHA109.5°109.5°
O1CAHAA109.5°109.5°
O1CAHAB109.5°109.5°
C2C3O3111.2°109.5°
C2C3C4111.9°109.5°
C3C2H2107.6°109.5°
C3C2H2A107.6°109.5°
C2C3H3106.9°109.5°
F2C5F3109.3°109.5°
F2C5C4109.8°109.5°
O3C3C4110.3°109.4°
O3C3H3108.6°109.5°
C3O3HO3109.5°114.1°
C3C4C5115.0°109.5°
C4C3H3107.8°109.5°
C3C4H4105.0°109.4°
F3C5C4109.3°109.5°
C5C4H4107.3°109.5°
HNNHNA109.4°111.0°
H2C2H2A111.3°109.5°
HACAHAA109.4°109.4°
HACAHAB109.5°109.5°
HAACAHAB109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
NC4C5F156.3°60.0°
NC4C3C266.6°60.0°
NC4C5F2177.7°60.0°
NC4C3O357.8°60.0°
NC4C3C5120.7°120.0°
NC4C3H4121.7°120.0°
NC4C5F362.4°180.0°
NC4C5H4121.8°120.0°
C4NHNHNA120.0°124.0°
NC4C3H3176.2°180.0°
O1C1C2O2179.5°180.0°
O1C1C2C320.7°180.0°
O1C1C2H299.3°60.0°
O1C1C2H2A140.7°60.0°
C1O1CAHA180.0°60.0°
C1O1CAHAA60.0°60.0°
C1O1CAHAB60.0°180.0°
C2C1O1CA138.5°180.0°
C1C2C3H2120.0°120.0°
C1C2C3H2A120.0°120.0°
C1C2C3O324.1°65.1°
C1C2C3C4148.0°175.0°
C1C2H2H2A117.6°120.0°
C1C2C3H394.2°55.0°
O2C1O1CA42.0°0.0°
O2C1C2C3158.8°0.0°
O2C1C2H281.2°120.0°
O2C1C2H2A38.8°120.0°
F1C5F2F3116.8°120.0°
F1C5F2C4123.3°120.0°
F1C5C4C365.6°60.0°
F1C5F3C4121.8°120.0°
F1C5C4H4178.1°180.0°
O1CAHAHAA120.0°120.0°
O1CAHAHAB120.0°120.0°
O1CAHAAHAB120.0°120.0°
C2C3O3C4124.7°119.9°
C2C3O3H3117.3°120.0°
C2C3C4H3117.2°120.0°
C2C3C4C5172.8°180.0°
C3C2H2H2A117.6°120.0°
C2C3O3HO3180.0°59.9°
C2C3C4H455.1°60.0°
F2C5C4C355.8°180.0°
F2C5F3C4120.2°120.0°
F2C5C4H460.5°60.0°
O3C3C4H3118.4°120.0°
O3C3C4C562.9°60.0°
O3C3C2H2144.2°175.0°
O3C3C2H2A95.8°55.0°
O3C3C4H4179.5°180.0°
C3C4C5F3175.7°60.0°
C3C4C5H4116.3°120.0°
C3C4NHN180.0°64.0°
C3C4NHNA60.0°60.1°
C4C3C2H292.0°55.0°
C4C3C2H2A28.0°65.0°
C4C3O3HO355.3°60.0°
F3C5C4H459.4°60.0°
C5C4NHN54.7°176.0°
C5C4NHNA174.6°60.0°
C5C4C3H355.5°60.0°
HNNC4H463.4°56.0°
HNANC4H456.6°180.0°
H2C2C3H325.8°65.0°
H2AC2C3H3145.8°175.0°
H3C3O3HO362.7°180.0°
H3C3C4H462.1°60.0°
HACAHAAHAB120.0°120.0°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon