F2T
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | SP1 | sing | 2.12Å | 1.52Å | |
| P | OP2 | doub | 1.48Å | 1.54Å | |
| P | O5' | sing | 1.61Å | 1.54Å | |
| O5' | C5' | sing | 1.43Å | 1.39Å | |
| C5' | C4' | sing | 1.53Å | 1.55Å | |
| C4' | O4' | sing | 1.44Å | 1.27Å | |
| C4' | C3' | sing | 1.55Å | 1.49Å | |
| O4' | C1' | sing | 1.44Å | 1.60Å | |
| C3' | O3' | sing | 1.43Å | 1.32Å | |
| C3' | C2' | sing | 1.55Å | 1.50Å | |
| C2' | F2' | sing | 1.40Å | 1.39Å | |
| C2' | C1' | sing | 1.54Å | 1.25Å | |
| C1' | N1 | sing | 1.46Å | 1.43Å | |
| N1 | C2 | sing | 1.35Å | 1.35Å | |
| N1 | C6 | sing | 1.37Å | 1.35Å | |
| C2 | O2 | doub | 1.22Å | 1.20Å | |
| C2 | N3 | sing | 1.35Å | 1.34Å | |
| N3 | C4 | sing | 1.35Å | 1.36Å | |
| C4 | O4 | doub | 1.22Å | 1.40Å | |
| C4 | C5 | sing | 1.42Å | 1.40Å | |
| C5 | C6 | doub | 1.35Å | 1.40Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'' | sing | 1.09Å | 1.10Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| N3 | H3 | sing | 0.97Å | 1.00Å | |
| C5 | H5 | sing | 1.08Å | 1.08Å | |
| C6 | H6 | sing | 1.08Å | 1.08Å | |
| P | OP3 | sing | 1.61Å | 1.55Å | |
| SP1 | H11 | sing | 1.35Å | 1.30Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| SP1 | P | OP2 | 101.6° | 109.4° |
| SP1 | P | O5' | 105.6° | 109.5° |
| SP1 | P | OP3 | 126.6° | 109.5° |
| P | SP1 | H11 | 102.0° | 103.0° |
| OP2 | P | O5' | 112.9° | 109.4° |
| OP2 | P | OP3 | 106.8° | 109.5° |
| P | O5' | C5' | 113.7° | 123.0° |
| O5' | P | OP3 | 103.6° | 109.5° |
| O5' | C5' | C4' | 109.8° | 109.5° |
| O5' | C5' | H5' | 109.4° | 109.5° |
| O5' | C5' | H5'' | 109.4° | 109.5° |
| C5' | C4' | O4' | 110.6° | 110.6° |
| C5' | C4' | C3' | 109.5° | 110.6° |
| C4' | C5' | H5' | 109.4° | 109.5° |
| C4' | C5' | H5'' | 109.4° | 109.5° |
| C5' | C4' | H4' | 110.0° | 110.6° |
| O4' | C4' | C3' | 100.9° | 103.5° |
| C4' | O4' | C1' | 105.8° | 107.0° |
| O4' | C4' | H4' | 114.7° | 110.6° |
| C4' | C3' | O3' | 110.7° | 110.9° |
| C4' | C3' | C2' | 101.6° | 102.1° |
| C3' | C4' | H4' | 110.8° | 110.7° |
| C4' | C3' | H3' | 111.7° | 110.9° |
| O4' | C1' | C2' | 106.9° | 107.3° |
| O4' | C1' | N1 | 110.4° | 109.9° |
| O4' | C1' | H1' | 107.3° | 109.9° |
| O3' | C3' | C2' | 105.7° | 110.9° |
| O3' | C3' | H3' | 114.6° | 110.8° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C3' | C2' | F2' | 102.0° | 110.5° |
| C3' | C2' | C1' | 103.9° | 104.2° |
| C2' | C3' | H3' | 111.6° | 110.9° |
| C3' | C2' | H2' | 111.8° | 110.5° |
| F2' | C2' | C1' | 107.4° | 110.5° |
| F2' | C2' | H2' | 113.6° | 110.5° |
| C2' | C1' | N1 | 110.2° | 109.9° |
| C1' | C2' | H2' | 116.6° | 110.6° |
| C2' | C1' | H1' | 112.5° | 109.9° |
| C1' | N1 | C2 | 119.0° | 119.7° |
| C1' | N1 | C6 | 117.4° | 119.7° |
| N1 | C1' | H1' | 109.5° | 110.0° |
| C2 | N1 | C6 | 123.6° | 120.6° |
| N1 | C2 | O2 | 122.5° | 119.5° |
| N1 | C2 | N3 | 117.3° | 121.0° |
| N1 | C6 | C5 | 120.7° | 119.7° |
| N1 | C6 | H6 | 119.7° | 120.2° |
| O2 | C2 | N3 | 120.2° | 119.6° |
| C2 | N3 | C4 | 121.3° | 120.3° |
| C2 | N3 | H3 | 119.3° | 119.9° |
| N3 | C4 | O4 | 118.0° | 120.3° |
| N3 | C4 | C5 | 123.3° | 119.4° |
| C4 | N3 | H3 | 119.4° | 119.9° |
| O4 | C4 | C5 | 118.7° | 120.3° |
| C4 | C5 | C6 | 113.9° | 119.1° |
| C4 | C5 | H5 | 123.1° | 120.4° |
| C6 | C5 | H5 | 123.1° | 120.5° |
| C5 | C6 | H6 | 119.7° | 120.1° |
| H5' | C5' | H5'' | 109.4° | 109.5° |
| P | OP3 | HOP3 | 109.5° | 114.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| SP1 | P | OP2 | O5' | 112.6° | 119.9° |
| SP1 | P | OP2 | OP3 | 134.2° | 120.0° |
| SP1 | P | O5' | OP3 | 134.7° | 120.1° |
| SP1 | P | O5' | C5' | 176.2° | 65.0° |
| SP1 | P | OP3 | HOP3 | 119.1° | 60.0° |
| OP2 | P | O5' | OP3 | 115.1° | 120.0° |
| OP2 | P | O5' | C5' | 66.1° | 55.0° |
| OP2 | P | SP1 | H11 | 0.0° | 60.1° |
| OP2 | P | OP3 | HOP3 | 0.0° | 180.0° |
| P | O5' | C5' | C4' | 137.5° | 180.0° |
| P | O5' | C5' | H5' | 17.4° | 60.0° |
| P | O5' | C5' | H5'' | 102.4° | 60.0° |
| O5' | P | SP1 | H11 | 118.1° | 180.0° |
| O5' | P | OP3 | HOP3 | 119.4° | 60.0° |
| O5' | C5' | C4' | H5' | 120.1° | 120.0° |
| O5' | C5' | C4' | H5'' | 120.1° | 120.0° |
| O5' | C5' | C4' | O4' | 27.0° | 66.5° |
| O5' | C5' | C4' | C3' | 83.3° | 179.5° |
| O5' | C5' | H5' | H5'' | 119.8° | 120.0° |
| O5' | C5' | C4' | H4' | 154.7° | 56.4° |
| C5' | O5' | P | OP3 | 49.1° | 175.0° |
| C5' | C4' | O4' | C3' | 115.8° | 118.5° |
| C5' | C4' | O4' | H4' | 125.1° | 122.9° |
| C5' | C4' | C3' | H4' | 121.5° | 122.9° |
| C5' | C4' | O4' | C1' | 148.8° | 158.5° |
| C5' | C4' | C3' | O3' | 86.1° | 86.3° |
| C5' | C4' | C3' | C2' | 162.0° | 155.5° |
| C4' | C5' | H5' | H5'' | 119.8° | 120.0° |
| C5' | C4' | C3' | H3' | 42.9° | 37.3° |
| O4' | C4' | C3' | H4' | 121.9° | 118.5° |
| O4' | C4' | C3' | O3' | 157.3° | 155.2° |
| O4' | C4' | C3' | C2' | 45.4° | 37.0° |
| C4' | O4' | C1' | C2' | 9.1° | 26.5° |
| C4' | O4' | C1' | N1 | 129.0° | 146.0° |
| O4' | C4' | C5' | H5' | 147.1° | 53.5° |
| O4' | C4' | C5' | H5'' | 93.1° | 173.5° |
| O4' | C4' | C3' | H3' | 73.7° | 81.2° |
| C4' | O4' | C1' | H1' | 111.8° | 92.9° |
| C3' | C4' | O4' | C1' | 33.0° | 40.1° |
| C4' | C3' | O3' | C2' | 109.3° | 112.7° |
| C4' | C3' | O3' | H3' | 127.4° | 123.7° |
| C4' | C3' | C2' | H3' | 119.1° | 118.2° |
| C4' | C3' | C2' | F2' | 71.5° | 97.8° |
| C4' | C3' | C2' | C1' | 40.1° | 20.9° |
| C3' | C4' | C5' | H5' | 36.8° | 60.5° |
| C3' | C4' | C5' | H5'' | 156.6° | 59.5° |
| C4' | C3' | O3' | HO3' | 180.0° | 180.0° |
| C4' | C3' | C2' | H2' | 166.7° | 139.7° |
| O4' | C1' | C2' | C3' | 20.0° | 2.0° |
| O4' | C1' | C2' | F2' | 87.6° | 120.7° |
| O4' | C1' | C2' | N1 | 120.0° | 119.4° |
| O4' | C1' | C2' | H1' | 117.5° | 119.4° |
| O4' | C1' | N1 | H1' | 117.9° | 121.1° |
| O4' | C1' | N1 | C2 | 154.4° | 126.5° |
| O4' | C1' | N1 | C6 | 25.3° | 53.3° |
| C1' | O4' | C4' | H4' | 86.1° | 78.6° |
| O4' | C1' | C2' | H2' | 143.6° | 116.7° |
| O3' | C3' | C2' | H3' | 125.2° | 123.6° |
| O3' | C3' | C2' | F2' | 44.1° | 20.4° |
| O3' | C3' | C2' | C1' | 155.7° | 139.1° |
| O3' | C3' | C4' | H4' | 35.5° | 36.7° |
| O3' | C3' | C2' | H2' | 77.7° | 102.1° |
| C3' | C2' | F2' | C1' | 108.9° | 114.8° |
| C3' | C2' | F2' | H2' | 120.6° | 122.6° |
| C3' | C2' | C1' | H2' | 123.5° | 118.7° |
| C3' | C2' | C1' | N1 | 100.0° | 121.5° |
| C2' | C3' | C4' | H4' | 76.5° | 81.5° |
| C2' | C3' | O3' | HO3' | 70.7° | 67.3° |
| C3' | C2' | C1' | H1' | 137.5° | 117.4° |
| F2' | C2' | C1' | H2' | 128.9° | 122.6° |
| F2' | C2' | C1' | N1 | 152.4° | 119.9° |
| F2' | C2' | C3' | H3' | 169.3° | 144.0° |
| F2' | C2' | C1' | H1' | 29.9° | 1.3° |
| C2' | C1' | N1 | H1' | 124.2° | 121.1° |
| C2' | C1' | N1 | C2 | 87.7° | 115.7° |
| C2' | C1' | N1 | C6 | 92.5° | 64.5° |
| C1' | C2' | C3' | H3' | 79.1° | 97.3° |
| C1' | N1 | C2 | C6 | 179.7° | 179.7° |
| C1' | N1 | C2 | O2 | 0.8° | 0.0° |
| C1' | N1 | C2 | N3 | 179.4° | 180.0° |
| C1' | N1 | C6 | C5 | 179.4° | 179.8° |
| N1 | C1' | C2' | H2' | 23.5° | 2.7° |
| C1' | N1 | C6 | H6 | 0.7° | 0.1° |
| N1 | C2 | O2 | N3 | 179.7° | 180.0° |
| N1 | C2 | N3 | C4 | 0.0° | 0.0° |
| C2 | N1 | C6 | C5 | 0.4° | 0.5° |
| C2 | N1 | C1' | H1' | 36.5° | 5.4° |
| N1 | C2 | N3 | H3 | 180.0° | 180.0° |
| C2 | N1 | C6 | H6 | 179.6° | 179.7° |
| C6 | N1 | C2 | O2 | 179.4° | 179.7° |
| C6 | N1 | C2 | N3 | 0.3° | 0.3° |
| N1 | C6 | C5 | C4 | 0.1° | 0.5° |
| N1 | C6 | C5 | H6 | 180.0° | 179.8° |
| C6 | N1 | C1' | H1' | 143.2° | 174.4° |
| N1 | C6 | C5 | H5 | 179.9° | 179.7° |
| O2 | C2 | N3 | C4 | 179.7° | 179.9° |
| O2 | C2 | N3 | H3 | 0.3° | 0.0° |
| C2 | N3 | C4 | H3 | 180.0° | 180.0° |
| C2 | N3 | C4 | O4 | 179.8° | 180.0° |
| C2 | N3 | C4 | C5 | 0.2° | 0.0° |
| N3 | C4 | O4 | C5 | 180.0° | 180.0° |
| N3 | C4 | C5 | C6 | 0.1° | 0.2° |
| N3 | C4 | C5 | H5 | 179.9° | 179.9° |
| O4 | C4 | C5 | C6 | 179.8° | 179.8° |
| O4 | C4 | N3 | H3 | 0.2° | 0.0° |
| O4 | C4 | C5 | H5 | 0.2° | 0.1° |
| C4 | C5 | C6 | H5 | 180.0° | 179.9° |
| C5 | C4 | N3 | H3 | 179.8° | 180.0° |
| C4 | C5 | C6 | H6 | 179.8° | 179.7° |
| H5' | C5' | C4' | H4' | 85.3° | 176.4° |
| H5'' | C5' | C4' | H4' | 34.6° | 63.6° |
| H4' | C4' | C3' | H3' | 164.5° | 160.3° |
| H3' | C3' | O3' | HO3' | 52.6° | 56.4° |
| H3' | C3' | C2' | H2' | 47.5° | 21.5° |
| H2' | C2' | C1' | H1' | 99.0° | 123.9° |
| H5 | C5 | C6 | H6 | 0.2° | 0.2° |
| OP3 | P | SP1 | H11 | 121.3° | 60.0° |
