Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

EYT

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N18C17sing1.47Å1.48Å
BRC13sing1.89Å1.91Å
C17C10sing1.53Å1.53Å
C13C14doub1.39Å1.34ÅAromatic
C13C11sing1.38Å1.34ÅAromatic
C2N3doub1.32Å1.34ÅAromatic
C2N1sing1.32Å1.35ÅAromatic
C14C15sing1.38Å1.47ÅAromatic
N3C4sing1.33Å1.36ÅAromatic
C10C11sing1.51Å1.49Å
C10O1sing1.44Å1.44Å
C11C12doub1.39Å1.46ÅAromatic
N1C6doub1.33Å1.35ÅAromatic
C15C16doub1.39Å1.35ÅAromatic
O2'Bsing1.37Å1.44Å
O2'C2'sing1.44Å1.41Å
C12C16sing1.38Å1.35ÅAromatic
C12Bsing1.56Å1.47Å
O1Bsing1.37Å1.43Å
C16O19sing1.36Å1.44Å
C4N9sing1.37Å1.33ÅAromatic
C4C5doub1.40Å1.47ÅAromatic
C6C5sing1.40Å1.39ÅAromatic
C6N6sing1.38Å1.35Å
O40C22doub1.21Å1.23Å
BO3'sing1.37Å1.42Å
C1'C2'sing1.55Å1.51Å
C1'N9sing1.47Å1.49Å
C1'O4'sing1.44Å1.42Å
S42C43sing1.76Å1.75ÅAromatic
S42C41sing1.71Å1.66ÅAromatic
C2'C3'sing1.56Å1.51Å
N9C8sing1.36Å1.36ÅAromatic
O19C20sing1.43Å1.43Å
C5N7sing1.35Å1.35ÅAromatic
C43C44doub1.33Å1.53ÅAromatic
C20C21sing1.53Å1.53Å
O4'C4'sing1.44Å1.44Å
C22C21sing1.51Å1.52Å
C22N23sing1.35Å1.33Å
O3'C3'sing1.45Å1.42Å
C8N7doub1.30Å1.35ÅAromatic
C3'C4'sing1.54Å1.52Å
C41N23sing1.39Å1.33Å
C41N45doub1.30Å1.31ÅAromatic
C4'C5'sing1.53Å1.53Å
C44N45sing1.32Å1.45ÅAromatic
C5'O5'sing1.43Å1.43Å
O5'Psing1.61Å1.59Å
OP2Pdoub1.48Å1.48Å
POP1sing1.61Å1.50Å
POP3sing1.61Å1.51Å
C2H1sing1.08Å1.08Å
C8H2sing1.08Å1.08Å
C10H3sing1.09Å1.10Å
C14H4sing1.08Å1.08Å
C15H5sing1.08Å1.08Å
C17H6sing1.09Å1.10Å
C17H7sing1.09Å1.10Å
C20H8sing1.09Å1.10Å
C20H9sing1.09Å1.10Å
C21H10sing1.09Å1.10Å
C21H11sing1.09Å1.10Å
OP3H12sing0.97Å0.95Å
OP1H13sing0.97Å0.95Å
C5'H14sing1.09Å1.10Å
C5'H15sing1.09Å1.10Å
C4'H16sing1.09Å1.10Å
C3'H17sing1.09Å1.10Å
C2'H18sing1.09Å1.10Å
C1'H19sing1.09Å1.10Å
N6H20sing0.97Å1.00Å
N6H21sing0.97Å1.00Å
N18H22sing1.01Å1.00Å
N18H23sing1.01Å1.00Å
N23H25sing0.97Å1.00Å
C44H26sing1.08Å1.08Å
C43H27sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N18C17C10112.2°109.5°
N18C17H6108.8°109.5°
N18C17H7108.8°109.4°
C17N18H22109.5°111.0°
C17N18H23109.5°111.0°
BRC13C14118.8°120.0°
BRC13C11121.7°120.0°
C17C10C11110.8°110.0°
C17C10O1108.7°110.1°
C17C10H3110.6°110.0°
C10C17H6108.8°109.5°
C10C17H7108.8°109.5°
C14C13C11119.5°119.9°
C13C14C15118.7°120.1°
C13C14H4120.6°119.9°
C13C11C10128.7°133.6°
C13C11C12122.7°120.1°
N3C2N1122.2°122.5°
C2N3C4119.5°120.7°
N3C2H1118.9°118.8°
C2N1C6122.2°121.2°
N1C2H1118.9°118.8°
C14C15C16121.2°120.0°
C15C14H4120.6°120.0°
C14C15H5119.4°120.0°
N3C4N9134.1°135.0°
N3C4C5119.4°119.0°
C11C10O1103.2°106.6°
C10C11C12108.7°106.4°
C11C10H3111.2°110.1°
C10O1B114.3°106.0°
O1C10H3112.1°110.1°
C11C12C16117.8°120.1°
C11C12B108.4°106.1°
N1C6C5119.0°118.4°
N1C6N6119.9°120.7°
C15C16C12120.0°119.7°
C15C16O19117.2°120.2°
C16C15H5119.4°120.0°
BO2'C2'114.6°107.5°
O2'BC12112.7°110.6°
O2'BO1105.2°110.6°
O2'BO3'100.7°108.8°
O2'C2'C1'111.9°108.6°
O2'C2'C3'102.2°103.4°
O2'C2'H18113.1°114.2°
C16C12B133.6°133.8°
C12C16O19122.8°120.1°
C12BO1104.7°106.4°
C12BO3'120.9°110.3°
O1BO3'111.8°110.2°
C16O19C20119.9°117.0°
N9C4C5106.4°106.0°
C4N9C1'124.1°126.3°
C4N9C8108.4°107.4°
C4C5C6117.8°118.2°
C4C5N7106.7°107.1°
C5C6N6121.1°120.8°
C6C5N7135.5°134.7°
C6N6H20109.5°120.0°
C6N6H21109.5°120.1°
O40C22C21121.5°120.0°
O40C22N23124.1°120.0°
BO3'C3'114.4°104.1°
C2'C1'N9110.8°110.5°
C2'C1'O4'105.0°104.0°
C1'C2'C3'106.1°102.2°
C1'C2'H18111.5°113.6°
C2'C1'H19109.1°110.5°
N9C1'O4'112.1°110.5°
C1'N9C8127.5°126.3°
N9C1'H19109.4°110.5°
C1'O4'C4'110.1°106.9°
O4'C1'H19110.4°110.6°
C43S42C4197.5°90.3°
S42C43C44106.0°108.0°
S42C43H27127.0°125.9°
S42C41N23127.6°125.0°
S42C41N45109.9°110.1°
C2'C3'O3'104.3°101.6°
C2'C3'C4'104.5°104.2°
C2'C3'H17111.2°113.7°
C3'C2'H18111.5°113.8°
N9C8N7111.0°110.0°
N9C8H2124.5°125.0°
O19C20C21109.4°109.5°
O19C20H8109.5°109.5°
O19C20H9109.5°109.5°
C5N7C8107.5°109.4°
C43C44N45106.6°114.6°
C43C44H26126.7°122.7°
C44C43H27127.0°126.0°
C20C21C22111.7°109.5°
C21C20H8109.5°109.5°
C21C20H9109.5°109.5°
C20C21H10108.9°109.4°
C20C21H11108.9°109.4°
O4'C4'C3'107.3°107.4°
O4'C4'C5'109.0°109.9°
O4'C4'H16109.8°110.0°
C21C22N23114.4°120.0°
C22C21H10108.9°109.5°
C22C21H11108.9°109.5°
C22N23C41123.8°120.0°
C22N23H25118.1°120.0°
O3'C3'C4'112.7°108.8°
O3'C3'H17112.6°114.2°
N7C8H2124.5°125.0°
C3'C4'C5'113.3°109.8°
C3'C4'H16108.8°109.9°
C4'C3'H17111.1°113.4°
N23C41N45122.4°124.9°
C41N23H25118.1°120.1°
C41N45C44119.6°116.9°
C4'C5'O5'110.7°109.5°
C4'C5'H14109.2°109.4°
C4'C5'H15109.2°109.5°
C5'C4'H16108.6°109.8°
N45C44H26126.7°122.7°
C5'O5'P113.1°123.0°
O5'C5'H14109.2°109.5°
O5'C5'H15109.2°109.5°
O5'POP2117.4°109.5°
O5'POP1117.7°109.5°
O5'POP396.9°109.4°
OP2POP1111.1°109.5°
OP2POP3102.6°109.5°
OP1POP3108.5°109.5°
POP1H13109.5°114.0°
POP3H12109.5°114.0°
H6C17H7109.5°109.5°
H8C20H9109.4°109.4°
H10C21H11109.5°109.5°
H14C5'H15109.5°109.5°
H20N6H21109.5°120.0°
H22N18H23109.4°111.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N18C17C10H6120.4°120.0°
N18C17C10H7120.4°120.0°
N18C17C10C1159.6°175.0°
N18C17C10O153.1°67.9°
N18C17C10H3176.6°53.6°
N18C17H6H7118.7°120.0°
C17N18H22H23120.0°124.0°
BRC13C14C11179.2°179.9°
BRC13C14C15178.7°180.0°
BRC13C11C101.7°0.2°
BRC13C11C12179.2°179.9°
BRC13C14H41.3°0.1°
C17C10C11C1369.5°43.3°
C17C10C11O1116.2°119.3°
C17C10C11H3123.5°121.4°
C17C10O1H3122.6°121.4°
C17C10C11C12109.7°136.7°
C17C10O1B109.0°148.4°
C10C17H6H7118.7°120.0°
C10C17N18H22180.0°180.0°
C10C17N18H2360.0°56.0°
C13C14C15H4180.0°179.9°
C14C13C11C10179.1°179.9°
C14C13C11C120.0°0.1°
C13C14C15C160.2°0.0°
C13C14C15H5179.8°180.0°
C11C13C14C150.6°0.0°
C13C11C10C12179.2°180.0°
C13C11C10O1174.3°162.6°
C13C11C12C161.0°0.1°
C13C11C12B178.2°179.8°
C13C11C10H353.9°78.1°
C11C13C14H4179.5°180.0°
N3C2N1H1180.0°179.8°
N3C2N1C60.3°0.1°
C2N3C4N9179.1°180.0°
C2N3C4C50.2°0.0°
N1C2N3C40.0°0.1°
C2N1C6C50.3°0.1°
C2N1C6N6179.8°180.0°
C14C15C16H5180.0°180.0°
C14C15C16C120.9°0.0°
C14C15C16O19179.9°180.0°
N3C4N9C5179.0°179.9°
N3C4C5C60.2°0.0°
N3C4N9C1'0.5°0.1°
N3C4N9C8179.8°179.9°
N3C4C5N7179.7°179.9°
C4N3C2H1180.0°179.7°
C11C10O1H3119.8°119.3°
C10C11C12C16179.7°179.8°
C10C11C12B2.5°0.3°
C11C10O1B8.6°29.1°
C11C10C17H660.8°55.0°
C11C10C17H7180.0°65.1°
O1C10C11C126.5°17.4°
C10O1BO2'111.7°148.8°
C10O1BC127.3°28.6°
C10O1BO3'139.8°90.9°
O1C10C17H6173.5°172.1°
O1C10C17H767.3°52.1°
C11C12C16C151.4°0.1°
C11C12BO2'111.2°138.0°
C11C12C16B176.3°179.9°
C11C12BO12.6°17.8°
C11C12C16O19179.6°179.9°
C11C12BO3'129.7°101.6°
C12C11C10H3126.9°101.9°
N1C6C5C40.0°0.0°
N1C6C5N6179.9°179.9°
N1C6C5N7179.9°179.9°
C6N1C2H1179.7°179.7°
N1C6N6H200.0°179.9°
N1C6N6H21120.0°0.1°
C15C16C12O19179.0°180.0°
C15C16C12B177.7°179.8°
C15C16O19C2017.0°0.0°
C16C15C14H4179.9°180.0°
O2'BC12C1672.2°41.9°
O2'BC12O1113.8°120.2°
O2'BC12O3'119.1°120.3°
O2'BO1O3'108.5°120.3°
BO2'C2'C1'132.0°112.2°
BO2'C2'C3'18.9°4.3°
O2'BO3'C3'2.5°39.7°
BO2'C2'H18101.1°119.9°
C2'O2'BC12141.3°148.6°
C2'O2'BO1105.3°93.8°
C2'O2'BO3'11.0°27.3°
O2'C2'C1'C3'110.7°108.8°
O2'C2'C1'H18127.8°128.2°
O2'C2'C1'N9154.4°97.3°
O2'C2'C1'O4'84.4°144.1°
O2'C2'C3'H18121.1°124.5°
O2'C2'C3'O3'18.4°18.1°
O2'C2'C3'C4'100.0°131.1°
O2'C2'C3'H17140.1°105.0°
O2'C2'C1'H1933.9°25.4°
C16C12BO1174.0°162.1°
C16C12BO3'46.8°78.4°
C12C16O19C20164.0°180.0°
C12C16C15H5179.1°180.0°
C12BO1O3'132.6°119.5°
BC12C16O193.3°0.2°
C12BO3'C3'122.3°161.2°
O1BO3'C3'113.8°81.7°
BO1C10H3128.4°90.2°
C16O19C20C21167.8°180.0°
O19C16C15H50.1°0.0°
C16O19C20H872.2°60.0°
C16O19C20H947.8°60.0°
N9C4C5C6179.4°180.0°
C4N9C1'C2'143.6°85.0°
C4N9C1'C8179.6°180.0°
C4N9C1'O4'99.6°160.4°
N9C4C5N70.5°0.0°
C4N9C8N70.8°0.0°
C4N9C8H2179.2°179.9°
C4N9C1'H1923.2°37.7°
C4C5C6N7179.8°179.9°
C4C5C6N6179.9°180.0°
C5C4N9C1'179.5°180.0°
C5C4N9C80.8°0.0°
C4C5N7C80.0°0.0°
C6C5N7C8179.9°180.0°
C5C6N6H20179.9°0.0°
C5C6N6H2159.9°180.0°
N6C6C5N70.2°0.0°
C6N6H20H21120.0°180.0°
O40C22C21C2025.6°0.0°
O40C22C21N23179.4°180.0°
O40C22N23C412.2°0.0°
O40C22C21H1094.7°120.0°
O40C22C21H11146.0°119.9°
O40C22N23H25177.8°180.0°
BO3'C3'C2'13.5°34.0°
BO3'C3'C4'99.1°143.5°
BO3'C3'H17134.2°88.8°
C2'C1'N9O4'116.9°114.6°
C2'C1'N9H19120.4°122.7°
C2'C1'O4'H19117.5°118.7°
C1'C2'C3'H18121.6°122.8°
C2'C1'N9C836.8°95.0°
C2'C1'O4'C4'25.5°40.0°
C1'C2'C3'O3'135.8°94.6°
C1'C2'C3'C4'17.4°18.4°
C1'C2'C3'H17102.6°142.3°
N9C1'O4'H19122.2°122.6°
N9C1'C2'C3'94.9°154.0°
N9C1'O4'C4'94.9°158.7°
C1'N9C8N7179.5°180.0°
C1'N9C8H20.5°0.0°
N9C1'C2'H1826.7°31.0°
O4'C1'C2'C3'26.3°35.3°
O4'C1'N9C880.1°19.6°
C1'O4'C4'C3'14.6°28.0°
C1'O4'C4'C5'108.4°147.4°
C1'O4'C4'H16132.7°91.6°
O4'C1'C2'H18147.8°87.6°
S42C43C44H27180.0°179.7°
C43S42C41N23178.2°179.9°
C43S42C41N451.2°0.3°
S42C43C44N455.7°0.3°
S42C43C44H26174.3°179.8°
C41S42C43C442.8°0.3°
S42C41N23C224.3°0.3°
S42C41N23N45179.4°179.7°
S42C41N45C445.6°0.3°
S42C41N23H25175.7°179.7°
C41S42C43H27177.2°179.9°
C2'C3'C4'O4'2.5°4.5°
C2'C3'O3'C4'112.7°109.5°
C2'C3'O3'H17120.7°122.8°
C2'C3'C4'H17120.0°124.1°
C2'C3'C4'C5'122.8°124.0°
C2'C3'C4'H16116.3°115.1°
C3'C2'C1'H19144.6°83.4°
N9C8N7C50.5°0.0°
N9C8N7H2180.0°180.0°
C8N9C1'H19157.2°142.3°
O19C20C21H8120.0°120.1°
O19C20C21H9120.0°120.0°
O19C20C21C2261.4°180.0°
O19C20H8H9120.0°120.0°
O19C20C21H10178.3°60.0°
O19C20C21H1159.0°60.0°
C5N7C8H2179.5°179.9°
C43C44N45C417.6°0.0°
C43C44N45H26180.0°180.0°
C20C21C22H10120.3°120.0°
C20C21C22H11120.3°120.0°
C20C21C22N23154.9°180.0°
C21C20H8H9120.0°120.0°
C20C21H10H11119.0°119.9°
O4'C4'C3'O3'115.0°112.3°
O4'C4'C3'C5'120.4°119.5°
O4'C4'C3'H16118.7°119.6°
O4'C4'C5'H16119.6°121.1°
O4'C4'C5'O5'145.0°66.8°
O4'C4'C5'H1494.8°53.2°
O4'C4'C5'H1524.8°173.2°
O4'C4'C3'H17117.5°119.6°
C4'O4'C1'H19142.9°78.7°
C21C22N23C41178.3°180.0°
C22C21C20H858.7°59.9°
C22C21C20H9178.7°60.0°
C22C21H10H11119.0°120.1°
C21C22N23H251.6°0.0°
C22N23C41H25180.0°180.0°
C22N23C41N45176.4°180.0°
N23C22C21H1084.7°60.0°
N23C22C21H1134.6°60.0°
O3'C3'C4'H17127.4°128.2°
O3'C3'C4'C5'124.6°128.3°
O3'C3'C4'H163.7°7.4°
O3'C3'C2'H18102.7°142.5°
C3'C4'C5'H16121.0°120.9°
C3'C4'C5'O5'95.5°175.3°
C3'C4'C5'H1424.6°64.8°
C3'C4'C5'H15144.3°55.2°
C4'C3'C2'H18138.9°104.5°
N23C41N45C44173.9°180.0°
N45C41N23H253.6°0.0°
C41N45C44H26172.4°180.0°
C4'C5'O5'H14120.2°119.9°
C4'C5'O5'H15120.2°120.0°
C4'C5'O5'P133.5°179.9°
C4'C5'H14H15119.5°120.0°
C5'C4'C3'H172.8°0.1°
N45C44C43H27174.3°180.0°
C5'O5'POP282.5°55.0°
C5'O5'POP154.4°175.0°
C5'O5'POP3169.5°65.0°
O5'C5'H14H15119.4°120.0°
O5'C5'C4'H1625.4°54.3°
O5'POP2OP1139.5°120.0°
O5'POP2OP3104.7°119.9°
O5'POP1OP3108.6°120.0°
O5'POP3H12120.1°60.0°
O5'POP1H13139.4°180.0°
PO5'C5'H14106.3°60.0°
PO5'C5'H1513.3°60.0°
OP2POP1OP3112.0°120.0°
OP2POP3H120.0°180.0°
OP2POP1H130.0°60.0°
OP1POP3H12117.6°60.0°
OP3POP1H13112.0°60.0°
H3C10C17H663.0°66.4°
H3C10C17H756.2°173.5°
H4C14C15H50.2°0.0°
H6C17N18H2259.6°60.0°
H6C17N18H2360.4°176.0°
H7C17N18H2259.6°60.0°
H7C17N18H23179.5°64.0°
H8C20C21H1061.7°60.0°
H8C20C21H11179.0°180.0°
H9C20C21H1058.3°180.0°
H9C20C21H1161.0°60.0°
H14C5'C4'H16145.6°174.3°
H15C5'C4'H1694.7°65.7°
H16C4'C3'H17123.7°120.8°
H17C3'C2'H1819.0°19.4°
H18C2'C1'H1993.9°153.6°
H26C44C43H275.7°0.0°

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon