EXY
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.47Å | |
CA | C | sing | 1.51Å | 1.56Å | |
CA | CB | sing | 1.53Å | 1.56Å | |
C | O | doub | 1.21Å | 1.26Å | |
C | OXT | sing | 1.34Å | 1.27Å | |
CB | CG | sing | 1.53Å | 1.53Å | |
CG | CD | sing | 1.53Å | 1.49Å | |
CD | CE | sing | 1.53Å | 1.47Å | |
CE | CF | sing | 1.53Å | 1.48Å | |
CF | CH | sing | 1.53Å | 1.55Å | |
CF | OF | sing | 1.43Å | 1.43Å | |
CH | OF | sing | 1.43Å | 1.41Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
CG | HG3 | sing | 1.09Å | 1.10Å | |
CD | HD2 | sing | 1.09Å | 1.10Å | |
CD | HD3 | sing | 1.09Å | 1.10Å | |
CE | HE2 | sing | 1.09Å | 1.10Å | |
CE | HE3 | sing | 1.09Å | 1.10Å | |
CF | HF | sing | 1.09Å | 1.10Å | |
CH | HH1 | sing | 1.09Å | 1.10Å | |
CH | HH2 | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | C | 109.0° | 109.5° |
N | CA | CB | 109.9° | 109.4° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | HA | 110.4° | 109.5° |
C | CA | CB | 112.1° | 109.5° |
CA | C | O | 123.6° | 120.0° |
CA | C | OXT | 117.1° | 120.0° |
C | CA | HA | 108.2° | 109.5° |
CA | CB | CG | 108.5° | 109.5° |
CB | CA | HA | 107.2° | 109.4° |
CA | CB | HB2 | 109.8° | 109.5° |
CA | CB | HB3 | 110.0° | 109.5° |
O | C | OXT | 119.3° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
CB | CG | CD | 110.3° | 109.5° |
CG | CB | HB2 | 109.8° | 109.5° |
CG | CB | HB3 | 110.0° | 109.5° |
CB | CG | HG2 | 109.2° | 109.5° |
CB | CG | HG3 | 109.0° | 109.4° |
CG | CD | CE | 107.7° | 109.5° |
CD | CG | HG2 | 109.2° | 109.5° |
CD | CG | HG3 | 109.0° | 109.4° |
CG | CD | HD2 | 110.1° | 109.5° |
CG | CD | HD3 | 110.5° | 109.5° |
CD | CE | CF | 109.6° | 109.5° |
CE | CD | HD2 | 110.1° | 109.4° |
CE | CD | HD3 | 110.4° | 109.5° |
CD | CE | HE2 | 109.4° | 109.4° |
CD | CE | HE3 | 109.4° | 109.5° |
CE | CF | CH | 111.5° | 117.8° |
CE | CF | OF | 129.3° | 117.8° |
CF | CE | HE2 | 109.4° | 109.5° |
CF | CE | HE3 | 109.3° | 109.5° |
CE | CF | HF | 90.0° | 115.8° |
CH | CF | OF | 56.4° | 57.6° |
CF | CH | OF | 57.5° | 57.6° |
CH | CF | HF | 144.9° | 117.7° |
CF | CH | HH1 | 132.3° | 117.8° |
CF | CH | HH2 | 137.3° | 117.8° |
CF | OF | CH | 66.1° | 64.8° |
OF | CF | HF | 129.3° | 117.8° |
OF | CH | HH1 | 132.3° | 117.8° |
OF | CH | HH2 | 137.3° | 117.7° |
H | N | H2 | 109.4° | 111.0° |
HB2 | CB | HB3 | 108.7° | 109.4° |
HG2 | CG | HG3 | 110.1° | 109.5° |
HD2 | CD | HD3 | 108.1° | 109.5° |
HE2 | CE | HE3 | 109.6° | 109.5° |
HH1 | CH | HH2 | 72.8° | 115.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | C | CB | 121.9° | 120.0° |
N | CA | C | HA | 120.1° | 120.1° |
N | CA | CB | HA | 120.0° | 120.0° |
N | CA | C | O | 179.6° | 20.0° |
N | CA | C | OXT | 0.2° | 160.0° |
N | CA | CB | CG | 74.9° | 65.0° |
CA | N | H | H2 | 120.0° | 123.9° |
N | CA | CB | HB2 | 165.1° | 55.0° |
N | CA | CB | HB3 | 45.5° | 175.0° |
C | CA | CB | HA | 118.6° | 120.0° |
CA | C | O | OXT | 179.8° | 180.0° |
C | CA | CB | CG | 46.5° | 175.0° |
C | CA | N | H | 16.4° | 64.0° |
C | CA | N | H2 | 136.4° | 60.0° |
CA | C | OXT | HXT | 179.8° | 180.0° |
C | CA | CB | HB2 | 73.5° | 65.0° |
C | CA | CB | HB3 | 166.9° | 55.0° |
CB | CA | C | O | 57.7° | 100.0° |
CB | CA | C | OXT | 122.1° | 80.0° |
CA | CB | CG | HB2 | 120.0° | 120.1° |
CA | CB | CG | HB3 | 120.4° | 120.0° |
CA | CB | CG | CD | 167.9° | 180.0° |
CB | CA | N | H | 106.8° | 176.0° |
CB | CA | N | H2 | 13.1° | 60.0° |
CA | CB | HB2 | HB3 | 120.4° | 120.0° |
CA | CB | CG | HG2 | 47.9° | 59.9° |
CA | CB | CG | HG3 | 72.4° | 60.1° |
O | C | CA | HA | 60.3° | 140.1° |
O | C | OXT | HXT | 0.0° | 0.1° |
OXT | C | CA | HA | 119.9° | 40.0° |
CB | CG | CD | HG2 | 120.0° | 120.0° |
CB | CG | CD | HG3 | 119.7° | 119.9° |
CB | CG | CD | CE | 179.5° | 180.0° |
CG | CB | CA | HA | 165.1° | 55.0° |
CG | CB | HB2 | HB3 | 120.4° | 120.0° |
CB | CG | HG2 | HG3 | 119.7° | 120.0° |
CB | CG | CD | HD2 | 59.5° | 60.0° |
CB | CG | CD | HD3 | 59.8° | 60.0° |
CG | CD | CE | HD2 | 120.0° | 120.0° |
CG | CD | CE | HD3 | 120.7° | 120.0° |
CG | CD | CE | CF | 179.2° | 180.0° |
CD | CG | CB | HB2 | 72.1° | 59.9° |
CD | CG | CB | HB3 | 47.5° | 60.0° |
CD | CG | HG2 | HG3 | 119.6° | 120.0° |
CG | CD | HD2 | HD3 | 120.7° | 120.0° |
CG | CD | CE | HE2 | 59.2° | 60.0° |
CG | CD | CE | HE3 | 60.9° | 60.0° |
CD | CE | CF | HE2 | 120.0° | 120.0° |
CD | CE | CF | HE3 | 119.9° | 120.0° |
CD | CE | CF | CH | 179.7° | 175.0° |
CD | CE | CF | OF | 116.2° | 119.0° |
CE | CD | CG | HG2 | 60.5° | 60.0° |
CE | CD | CG | HG3 | 59.8° | 60.0° |
CE | CD | HD2 | HD3 | 120.7° | 120.0° |
CD | CE | HE2 | HE3 | 119.9° | 120.0° |
CD | CE | CF | HF | 28.8° | 28.1° |
CE | CF | CH | OF | 123.8° | 106.8° |
CE | CF | CH | HF | 124.1° | 146.3° |
CE | CF | OF | HF | 132.2° | 146.4° |
CF | CE | CD | HD2 | 60.8° | 60.0° |
CF | CE | CD | HD3 | 58.5° | 60.0° |
CF | CE | HE2 | HE3 | 119.9° | 120.0° |
CE | CF | CH | HH1 | 3.8° | 0.0° |
CE | CF | CH | HH2 | 109.6° | 146.4° |
CH | CF | OF | HF | 136.5° | 106.8° |
CF | CH | OF | HH1 | 120.0° | 106.9° |
CF | CH | OF | HH2 | 126.5° | 106.9° |
CH | CF | CE | HE2 | 59.7° | 65.0° |
CH | CF | CE | HE3 | 60.4° | 55.0° |
CF | CH | HH1 | HH2 | 139.4° | 147.1° |
OF | CF | CE | HE2 | 3.8° | 1.0° |
OF | CF | CE | HE3 | 123.9° | 121.0° |
OF | CH | HH1 | HH2 | 139.4° | 147.0° |
H | N | CA | HA | 135.1° | 56.1° |
H2 | N | CA | HA | 105.0° | 180.0° |
HA | CA | CB | HB2 | 45.1° | 175.0° |
HA | CA | CB | HB3 | 74.5° | 65.0° |
HB2 | CB | CG | HG2 | 167.9° | 180.0° |
HB2 | CB | CG | HG3 | 47.6° | 60.0° |
HB3 | CB | CG | HG2 | 72.5° | 60.1° |
HB3 | CB | CG | HG3 | 167.2° | 180.0° |
HG2 | CG | CD | HD2 | 179.5° | 180.0° |
HG2 | CG | CD | HD3 | 60.2° | 60.0° |
HG3 | CG | CD | HD2 | 60.2° | 59.9° |
HG3 | CG | CD | HD3 | 179.5° | 180.0° |
HD2 | CD | CE | HE2 | 179.2° | NaN° |
HD2 | CD | CE | HE3 | 59.1° | 60.0° |
HD3 | CD | CE | HE2 | 61.5° | 60.0° |
HD3 | CD | CE | HE3 | 178.4° | 180.0° |
HE2 | CE | CF | HF | 148.8° | 148.0° |
HE3 | CE | CF | HF | 91.2° | 92.0° |
HF | CF | CH | HH1 | 127.9° | 146.3° |
HF | CF | CH | HH2 | 14.4° | 0.1° |