EVJ
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C2 | S | sing | 1.76Å | 1.66Å | |
| O2 | S | doub | 1.42Å | 1.43Å | |
| O1 | S | doub | 1.42Å | 1.46Å | |
| S | NH | sing | 1.66Å | 1.61Å | |
| C5 | S1 | sing | 1.76Å | 1.77Å | Aromatic |
| C2 | S1 | sing | 1.76Å | 1.72Å | Aromatic |
| C3 | C2 | doub | 1.33Å | 1.40Å | Aromatic |
| C4 | C3 | sing | 1.38Å | 1.41Å | Aromatic |
| C3 | H3 | sing | 1.08Å | 1.08Å | |
| C4 | C5 | doub | 1.33Å | 1.41Å | Aromatic |
| C4 | H4 | sing | 1.08Å | 1.08Å | |
| C5 | H5 | sing | 1.08Å | 1.08Å | |
| NH | HNH | sing | 0.97Å | 1.00Å | |
| NH | HNHA | sing | 0.97Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2 | S | O2 | 107.0° | 106.4° |
| C2 | S | O1 | 101.4° | 106.4° |
| C2 | S | NH | 115.2° | 107.2° |
| S | C2 | S1 | 121.2° | 125.2° |
| S | C2 | C3 | 125.6° | 125.2° |
| O2 | S | O1 | 113.3° | 123.1° |
| O2 | S | NH | 107.6° | 106.4° |
| O1 | S | NH | 112.3° | 106.4° |
| S | NH | HNH | 109.5° | 120.0° |
| S | NH | HNHA | 109.5° | 120.0° |
| C5 | S1 | C2 | 91.8° | 91.0° |
| S1 | C5 | C4 | 108.9° | 109.6° |
| S1 | C5 | H5 | 125.6° | 125.2° |
| S1 | C2 | C3 | 113.1° | 109.6° |
| C2 | C3 | C4 | 110.7° | 114.9° |
| C2 | C3 | H3 | 124.6° | 122.5° |
| C4 | C3 | H3 | 124.6° | 122.6° |
| C3 | C4 | C5 | 115.4° | 114.9° |
| C3 | C4 | H4 | 122.3° | 122.5° |
| C5 | C4 | H4 | 122.3° | 122.6° |
| C4 | C5 | H5 | 125.6° | 125.2° |
| HNH | NH | HNHA | 109.4° | 119.9° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C2 | S | O2 | O1 | 110.9° | 123.0° |
| C2 | S | O2 | NH | 124.4° | 114.1° |
| C2 | S | O1 | NH | 123.5° | 114.1° |
| S | C2 | S1 | C5 | 177.8° | 180.0° |
| S | C2 | S1 | C3 | 176.1° | 179.9° |
| S | C2 | C3 | C4 | 177.8° | 180.0° |
| S | C2 | C3 | H3 | 2.2° | 0.0° |
| C2 | S | NH | HNH | 180.0° | 0.0° |
| C2 | S | NH | HNHA | 60.0° | 180.0° |
| O2 | S | O1 | NH | 122.2° | 122.9° |
| O2 | S | C2 | S1 | 174.0° | 23.6° |
| O2 | S | C2 | C3 | 1.6° | 156.5° |
| O2 | S | NH | HNH | 60.8° | 113.5° |
| O2 | S | NH | HNHA | 179.3° | 66.4° |
| O1 | S | C2 | S1 | 55.0° | 156.5° |
| O1 | S | C2 | C3 | 120.5° | 23.6° |
| O1 | S | NH | HNH | 64.6° | 113.6° |
| O1 | S | NH | HNHA | 55.4° | 66.4° |
| NH | S | C2 | S1 | 66.4° | 90.0° |
| NH | S | C2 | C3 | 118.0° | 89.9° |
| S | NH | HNH | HNHA | 120.0° | 180.0° |
| C5 | S1 | C2 | C3 | 1.8° | 0.1° |
| S1 | C5 | C4 | C3 | 0.2° | 0.0° |
| S1 | C5 | C4 | H5 | 180.0° | 179.9° |
| S1 | C5 | C4 | H4 | 179.8° | 180.0° |
| S1 | C2 | C3 | C4 | 1.9° | 0.1° |
| S1 | C2 | C3 | H3 | 178.0° | 180.0° |
| C2 | S1 | C5 | C4 | 1.1° | 0.0° |
| C2 | S1 | C5 | H5 | 178.9° | 180.0° |
| C2 | C3 | C4 | H3 | 180.0° | 180.0° |
| C2 | C3 | C4 | C5 | 1.1° | 0.0° |
| C2 | C3 | C4 | H4 | 178.9° | 180.0° |
| C3 | C4 | C5 | H4 | 180.0° | 180.0° |
| C3 | C4 | C5 | H5 | 179.8° | 180.0° |
| H3 | C3 | C4 | C5 | 178.9° | 180.0° |
| H3 | C3 | C4 | H4 | 1.1° | 0.0° |
| H4 | C4 | C5 | H5 | 0.2° | 0.0° |
