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Summary Geometry Related PDB entries

ETY

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C8	C7	sing	1.53Å	1.53Å
C7	CG	sing	1.51Å	1.50Å
CG	C3	doub	1.38Å	1.42Å	Aromatic
CG	C5	sing	1.38Å	1.42Å	Aromatic
C3	C2	sing	1.38Å	1.41Å	Aromatic
C2	C1	doub	1.39Å	1.41Å	Aromatic
C5	C6	doub	1.38Å	1.41Å	Aromatic
C6	C1	sing	1.39Å	1.41Å	Aromatic
C1	O1	sing	1.36Å	1.37Å
C8	H81	sing	1.09Å	1.10Å
C8	H82	sing	1.09Å	1.10Å
C8	H83	sing	1.09Å	1.10Å
C7	H71	sing	1.09Å	1.10Å
C7	H72	sing	1.09Å	1.10Å
C3	H3	sing	1.08Å	1.08Å
C2	H2	sing	1.08Å	1.08Å
C5	H5	sing	1.08Å	1.08Å
C6	H6	sing	1.08Å	1.08Å
O1	HO1	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C8	C7	CG	113.8°	109.4°
C7	C8	H81	109.5°	109.5°
C7	C8	H82	109.4°	109.5°
C7	C8	H83	109.5°	109.5°
C8	C7	H71	108.1°	109.5°
C8	C7	H72	107.1°	109.4°
C7	CG	C3	121.0°	119.9°
C7	CG	C5	120.7°	119.9°
CG	C7	H71	108.1°	109.5°
CG	C7	H72	107.1°	109.5°
C3	CG	C5	118.4°	120.2°
CG	C3	C2	121.1°	120.1°
CG	C3	H3	119.4°	120.0°
CG	C5	C6	120.9°	120.0°
CG	C5	H5	119.6°	120.0°
C3	C2	C1	119.4°	119.9°
C2	C3	H3	119.4°	119.9°
C3	C2	H2	120.3°	120.0°
C2	C1	C6	120.6°	119.9°
C2	C1	O1	119.9°	120.0°
C1	C2	H2	120.3°	120.1°
C5	C6	C1	119.6°	119.9°
C6	C5	H5	119.6°	119.9°
C5	C6	H6	120.2°	120.1°
C6	C1	O1	119.5°	120.1°
C1	C6	H6	120.2°	120.0°
C1	O1	HO1	109.5°	113.9°
H81	C8	H82	109.5°	109.5°
H81	C8	H83	109.4°	109.5°
H82	C8	H83	109.5°	109.4°
H71	C7	H72	112.9°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C8	C7	CG	H71	120.0°	120.0°
C8	C7	CG	H72	118.1°	119.9°
C8	C7	CG	C3	85.4°	90.0°
C8	C7	CG	C5	94.6°	90.3°
C7	C8	H81	H82	120.0°	120.0°
C7	C8	H81	H83	120.0°	120.1°
C7	C8	H82	H83	120.0°	120.0°
C8	C7	H71	H72	118.3°	120.0°
C7	CG	C3	C5	180.0°	179.7°
C7	CG	C3	C2	179.9°	180.0°
C7	CG	C5	C6	179.9°	179.9°
CG	C7	C8	H81	94.9°	60.0°
CG	C7	C8	H82	25.1°	180.0°
CG	C7	C8	H83	145.1°	60.0°
CG	C7	H71	H72	118.2°	120.1°
C7	CG	C3	H3	0.1°	0.1°
C7	CG	C5	H5	0.1°	0.0°
CG	C3	C2	H3	180.0°	179.9°
CG	C3	C2	C1	0.1°	0.1°
C3	CG	C5	C6	0.1°	0.2°
C3	CG	C7	H71	34.6°	29.9°
C3	CG	C7	H72	156.5°	150.0°
CG	C3	C2	H2	179.9°	180.0°
C3	CG	C5	H5	179.9°	179.7°
C5	CG	C3	C2	0.1°	0.3°
CG	C5	C6	H5	180.0°	179.9°
CG	C5	C6	C1	0.1°	0.1°
C5	CG	C7	H71	145.4°	149.8°
C5	CG	C7	H72	23.5°	29.7°
C5	CG	C3	H3	179.9°	179.8°
CG	C5	C6	H6	179.9°	180.0°
C3	C2	C1	H2	180.0°	179.9°
C3	C2	C1	C6	0.1°	0.2°
C3	C2	C1	O1	179.8°	180.0°
C2	C1	C6	C5	0.0°	0.3°
C2	C1	C6	O1	179.8°	179.8°
C1	C2	C3	H3	179.9°	180.0°
C2	C1	C6	H6	180.0°	179.8°
C2	C1	O1	HO1	29.9°	90.0°
C5	C6	C1	H6	180.0°	179.9°
C5	C6	C1	O1	179.8°	179.9°
C6	C1	C2	H2	180.0°	179.7°
C1	C6	C5	H5	179.9°	180.0°
C6	C1	O1	HO1	150.3°	89.8°
O1	C1	C2	H2	0.2°	0.1°
O1	C1	C6	H6	0.2°	0.0°
H81	C8	H82	H83	120.0°	120.0°
H81	C8	C7	H71	25.1°	180.0°
H81	C8	C7	H72	147.0°	60.0°
H82	C8	C7	H71	145.1°	60.0°
H82	C8	C7	H72	93.0°	60.1°
H83	C8	C7	H71	94.9°	59.9°
H83	C8	C7	H72	27.0°	180.0°
H3	C3	C2	H2	0.1°	0.1°
H5	C5	C6	H6	0.1°	0.1°

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PDB entries from 2026-02-04

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