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Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C0C1sing1.47Å1.37Å
C0N1sing1.33Å1.30Å
C0N2doub1.33Å1.30Å
C1S2sing1.78Å1.87ÅAromatic
C1C5doub1.36Å1.38ÅAromatic
N1HH11sing0.97Å1.01Å
N1HH12sing0.97Å0.99Å
N2HH21sing0.97Å1.02Å
N2HH22sing0.97Å0.99Å
S2C3sing1.77Å1.77ÅAromatic
C3C4doub1.42Å1.39ÅAromatic
C3C6sing1.38Å1.38ÅAromatic
C4C5sing1.41Å1.40ÅAromatic
C4C9sing1.42Å1.39ÅAromatic
C5H5sing1.08Å1.08Å
C6C7doub1.38Å1.38ÅAromatic
C6H6sing1.08Å1.08Å
C7C8sing1.39Å1.39ÅAromatic
C7H7sing1.08Å1.08Å
C8C9doub1.36Å1.40ÅAromatic
C8H8sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C0N1119.6°120.0°
C1C0N2115.8°120.1°
C0C1S2121.7°128.5°
C0C1C5133.0°128.6°
N1C0N2124.6°119.9°
C0N1HH11115.9°120.0°
C0N1HH12126.6°120.0°
C0N2HH21118.4°120.0°
C0N2HH22124.7°120.1°
S2C1C5105.3°102.9°
C1S2C393.2°98.3°
C1C5C4116.6°120.0°
C1C5H5121.5°120.0°
HH11N1HH12117.4°120.0°
HH21N2HH22116.7°120.0°
S2C3C4108.2°103.5°
S2C3C6128.9°134.4°
C4C3C6123.0°122.2°
C3C4C5116.7°115.3°
C3C4C9117.0°116.4°
C3C6C7119.4°119.6°
C3C6H6120.2°120.2°
C5C4C9126.2°128.3°
C4C5H5121.9°120.0°
C4C9C8121.0°120.8°
C4C9H9120.0°119.6°
C7C6H6120.4°120.2°
C6C7C8119.4°119.5°
C6C7H7120.3°120.3°
C8C7H7120.4°120.3°
C7C8C9120.3°121.7°
C7C8H8119.8°119.1°
C9C8H8119.9°119.2°
C8C9H9119.0°119.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C0N1N2178.9°180.0°
C0C1S2C5179.9°179.7°
C1C0N1HH116.0°180.0°
C1C0N1HH12178.6°0.0°
C1C0N2HH216.4°0.0°
C1C0N2HH22179.9°179.7°
C0C1S2C3179.9°180.0°
C0C1C5C4179.8°179.8°
C0C1C5H50.2°0.0°
N1C0C1S2176.9°150.1°
N1C0C1C53.2°30.3°
C0N1HH11HH12175.9°179.9°
N1C0N2HH21172.5°180.0°
N1C0N2HH221.2°0.3°
N2C0C1S24.1°30.0°
N2C0C1C5175.8°149.7°
N2C0N1HH11172.9°0.0°
N2C0N1HH122.6°179.9°
C0N2HH21HH22174.2°179.7°
C1S2C3C40.2°0.1°
C1S2C3C6180.0°180.0°
S2C1C5C40.3°0.5°
S2C1C5H5179.9°179.7°
C5C1S2C30.0°0.3°
C1C5C4C30.5°0.5°
C1C5C4H5179.6°179.8°
C1C5C4C9180.0°179.7°
S2C3C4C6179.8°179.9°
S2C3C4C50.4°0.2°
S2C3C4C9180.0°180.0°
S2C3C6C7179.8°179.9°
S2C3C6H60.0°0.0°
C3C4C5C9179.5°179.8°
C3C4C5H5179.9°179.7°
C4C3C6C70.1°0.0°
C4C3C6H6179.8°179.9°
C3C4C9C80.1°0.1°
C3C4C9H9180.0°179.9°
C6C3C4C5179.8°179.7°
C6C3C4C90.2°0.1°
C3C6C7H6179.8°180.0°
C3C6C7C80.2°0.0°
C3C6C7H7179.9°179.9°
C5C4C9C8179.6°179.7°
C5C4C9H90.4°0.3°
C9C4C5H50.4°0.1°
C4C9C8C70.1°0.1°
C4C9C8H9179.9°179.9°
C4C9C8H8180.0°179.9°
C6C7C8H7179.8°179.9°
C6C7C8C90.3°0.0°
C6C7C8H8179.8°180.0°
H6C6C7C8180.0°180.0°
H6C6C7H70.2°0.1°
C7C8C9H8179.9°180.0°
C7C8C9H9179.8°180.0°
H7C7C8C9179.9°179.9°
H7C7C8H80.0°0.1°
H8C8C9H90.1°0.0°

220113

PDB entries from 2024-05-22

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