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SummaryGeometryRelated PDB entries

EQQ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C33C32doub1.34Å1.36ÅAromatic
C33C34sing1.43Å1.49ÅAromatic
C32C31sing1.43Å1.49ÅAromatic
N35C34doub1.37Å1.30ÅAromatic
N35C36sing1.31Å1.44ÅAromatic
C34C38sing1.44Å1.44ÅAromatic
C36C37doub1.39Å1.34ÅAromatic
C31N29doub1.37Å1.30ÅAromatic
C31C30sing1.44Å1.44ÅAromatic
N29C28sing1.31Å1.45ÅAromatic
C38C30sing1.46Å1.34ÅAromatic
C38N39doub1.36Å1.40ÅAromatic
C30N26doub1.36Å1.39ÅAromatic
C37N39sing1.33Å1.41ÅAromatic
N39RUsing2.26Å2.01Å
C28C27doub1.39Å1.34ÅAromatic
C53C52doub1.40Å1.35ÅAromatic
C53N50sing1.33Å1.42ÅAromatic
C52N51sing1.31Å1.45ÅAromatic
N26C27sing1.33Å1.41ÅAromatic
N26RUsing2.24Å2.00Å
N50RUsing2.15Å2.03Å
N50C49doub1.36Å1.39ÅAromatic
N51C48doub1.37Å1.30ÅAromatic
RUN22sing2.72Å2.00Å
RUN17sing2.29Å2.00Å
RUN40sing2.08Å1.99Å
C23N22doub1.33Å1.41ÅAromatic
C23C24sing1.40Å1.33ÅAromatic
N22C19sing1.35Å1.40ÅAromatic
C49C48sing1.42Å1.44ÅAromatic
C49C45sing1.46Å1.34ÅAromatic
C48C47sing1.43Å1.49ÅAromatic
C24C25doub1.37Å1.50ÅAromatic
N17C16doub1.32Å1.41ÅAromatic
N17C18sing1.35Å1.40ÅAromatic
C16C15sing1.40Å1.34ÅAromatic
C19C18doub1.42Å1.40ÅAromatic
C19C20sing1.41Å1.37ÅAromatic
C18C13sing1.42Å1.37ÅAromatic
N40C45doub1.36Å1.38ÅAromatic
N40C41sing1.33Å1.41ÅAromatic
C25C20sing1.40Å1.35ÅAromatic
C45C44sing1.42Å1.44ÅAromatic
C47C46doub1.35Å1.36ÅAromatic
C20C11doub1.46Å1.39ÅAromatic
C15C14doub1.37Å1.50ÅAromatic
C13C14sing1.40Å1.35ÅAromatic
C13C10doub1.46Å1.40ÅAromatic
C41C42doub1.40Å1.34ÅAromatic
C11C10sing1.43Å1.44ÅAromatic
C11N12sing1.33Å1.35ÅAromatic
C44C46sing1.43Å1.49ÅAromatic
C44N43doub1.37Å1.30ÅAromatic
C10N09sing1.33Å1.35ÅAromatic
N12C08doub1.35Å1.35ÅAromatic
C42N43sing1.31Å1.44ÅAromatic
N09C07doub1.36Å1.35ÅAromatic
C08C07sing1.43Å1.41ÅAromatic
C08C05sing1.40Å1.48ÅAromatic
C07C06sing1.40Å1.45ÅAromatic
C05C04doub1.37Å1.34ÅAromatic
C06C03doub1.37Å1.33ÅAromatic
C04C03sing1.43Å1.49ÅAromatic
C04C54sing1.45Å1.44Å
C03C02sing1.45Å1.43Å
C54N55trip1.14Å1.16Å
C02N01trip1.14Å1.15Å
C05H1sing0.94Å1.08Å
C06H2sing0.94Å1.08Å
C14H3sing0.94Å1.08Å
C15H4sing0.94Å1.08Å
C16H5sing0.94Å1.08Å
C23H6sing0.94Å1.08Å
C24H7sing0.94Å1.08Å
C25H8sing0.94Å1.08Å
C27H9sing0.95Å1.08Å
C28H10sing0.95Å1.08Å
C32H11sing0.94Å1.08Å
C33H12sing0.94Å1.08Å
C36H13sing0.95Å1.08Å
C37H14sing0.92Å1.08Å
C41H15sing0.95Å1.08Å
C42H16sing0.95Å1.08Å
C46H17sing0.94Å1.08Å
C47H18sing0.94Å1.08Å
C52H19sing0.95Å1.08Å
C53H20sing0.95Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C32C33C34121.5°121.4°
C33C32C31119.9°121.5°
C33C32H11120.0°119.3°
C32C33H12119.2°119.4°
C33C34N35124.5°119.2°
C33C34C38116.8°120.1°
C34C33H12119.2°119.3°
C32C31N29124.2°119.3°
C32C31C30116.8°120.2°
C31C32H11120.0°119.2°
C34N35C36122.0°117.2°
N35C34C38118.7°120.7°
N35C36C37121.5°122.2°
N35C36H13119.2°118.7°
C34C38C30121.6°118.5°
C34C38N39119.0°120.1°
C36C37N39117.1°123.4°
C37C36H13119.3°119.1°
C36C37H14121.5°116.6°
N29C31C30119.0°120.5°
C31N29C28122.2°117.4°
C31C30C38123.4°118.3°
C31C30N26117.8°120.1°
N29C28C27120.9°122.3°
N29C28H10119.5°118.7°
C30C38N39119.4°121.4°
C38C30N26118.8°121.6°
C38N39C37121.7°116.4°
C38N39RU108.2°108.0°
C30N26C27123.1°116.8°
C30N26RU109.2°108.6°
C37N39RU130.1°135.4°
N39C37H14121.5°119.9°
N39RUN2684.5°79.7°
N39RUN5092.9°81.5°
N39RUN2295.1°110.9°
N39RUN1795.5°91.4°
N39RUN40175.8°161.7°
C28C27N26116.9°122.8°
C28C27H9121.6°117.1°
C27C28H10119.5°119.0°
C52C53N50117.1°122.1°
C53C52N51121.2°122.3°
C53C52H19119.4°119.0°
C52C53H20121.4°118.2°
C53N50RU130.4°136.1°
C53N50C49121.7°117.4°
N50C53H20121.5°119.7°
C52N51C48122.0°117.6°
N51C52H19119.4°118.7°
C27N26RU127.8°133.7°
N26C27H9121.5°120.0°
N26RUN5087.6°73.7°
N26RUN2294.2°135.7°
N26RUN17180.0°162.2°
N26RUN4092.4°85.6°
RUN50C49107.9°105.9°
N50RUN22171.9°66.1°
N50RUN1792.4°120.5°
N50RUN4084.1°84.1°
N50C49C48119.1°120.5°
N50C49C45119.5°120.3°
N51C48C49118.9°120.2°
N51C48C47124.0°120.3°
N22RUN1785.8°61.9°
N22RUN4088.0°72.8°
RUN22C23126.9°133.1°
RUN22C19108.8°98.5°
N17RUN4087.6°105.6°
RUN17C16127.5°113.7°
RUN17C18108.7°109.6°
RUN40C45109.7°107.5°
RUN40C41127.1°134.2°
N22C23C24116.6°124.4°
C23N22C19124.1°116.0°
N22C23H6121.7°117.9°
C23C24C25119.9°118.6°
C24C23H6121.7°117.3°
C23C24H7120.1°120.4°
N22C19C18118.3°116.0°
N22C19C20119.5°123.5°
C48C49C45121.4°119.2°
C49C48C47117.0°119.5°
C49C45N40118.8°120.6°
C49C45C44123.5°118.7°
C48C47C46121.3°121.4°
C48C47H18119.4°119.3°
C24C25C20121.2°118.8°
C25C24H7120.0°120.9°
C24C25H8119.4°120.1°
C16N17C18123.7°117.1°
N17C16C15116.7°124.0°
N17C16H5121.7°117.8°
N17C18C19118.1°115.9°
N17C18C13120.1°123.3°
C16C15C14119.8°118.9°
C16C15H4120.1°120.4°
C15C16H5121.6°118.1°
C18C19C20122.1°120.5°
C19C18C13121.8°120.7°
C19C20C25118.7°118.0°
C19C20C11117.5°120.1°
C18C13C14118.6°117.6°
C18C13C10117.4°119.8°
C45N40C41123.2°117.4°
N40C45C44117.7°120.7°
N40C41C42116.9°121.7°
N40C41H15121.5°119.1°
C25C20C11123.8°121.8°
C20C25H8119.4°121.0°
C45C44C46116.8°119.6°
C45C44N43119.2°120.0°
C47C46C44120.0°121.5°
C47C46H17120.0°119.3°
C46C47H18119.4°119.3°
C20C11C10120.5°119.7°
C20C11N12119.6°118.2°
C15C14C13121.0°119.1°
C15C14H3119.5°120.1°
C14C15H4120.1°120.7°
C14C13C10124.0°122.6°
C13C14H3119.5°120.9°
C13C10C11120.7°119.2°
C13C10N09120.3°119.3°
C41C42N43120.7°122.5°
C42C41H15121.6°119.2°
C41C42H16119.7°118.8°
C10C11N12119.9°122.1°
C11C10N09119.1°121.6°
C11N12C08120.4°117.0°
C46C44N43123.9°120.4°
C44C46H17120.0°119.2°
C44N43C42122.2°117.6°
C10N09C07120.3°116.9°
N12C08C07119.7°121.1°
N12C08C05120.4°119.1°
N43C42H16119.6°118.7°
N09C07C08120.7°121.3°
N09C07C06119.5°119.6°
C07C08C05119.9°119.8°
C08C07C06119.8°119.2°
C08C05C04119.0°120.1°
C08C05H1120.5°119.6°
C07C06C03119.4°120.3°
C07C06H2120.3°119.5°
C05C04C03120.2°120.2°
C05C04C54121.6°119.9°
C04C05H1120.5°120.3°
C06C03C04121.7°120.4°
C06C03C02119.0°119.9°
C03C06H2120.3°120.2°
C03C04C54118.2°119.9°
C04C03C02119.2°119.7°
C04C54N55174.9°179.6°
C03C02N01177.8°179.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C32C33C34H12180.0°179.5°
C33C32C31H11180.0°179.2°
C32C33C34N35180.0°179.6°
C32C33C34C380.1°0.3°
C33C32C31N29180.0°179.5°
C33C32C31C300.0°0.6°
C34C33C32C310.0°0.7°
C33C34N35C38179.9°179.9°
C33C34N35C36179.9°179.7°
C33C34C38C300.3°0.1°
C33C34C38N39178.7°179.4°
C34C33C32H11180.0°179.9°
C32C31N29C30179.9°180.0°
C32C31N29C28180.0°179.5°
C32C31C30C380.2°0.2°
C32C31C30N26179.7°179.2°
C31C32C33H12180.0°179.9°
C34N35C36C370.3°0.2°
N35C34C38C30179.8°180.0°
N35C34C38N391.4°0.7°
N35C34C33H120.0°0.1°
C34N35C36H13179.6°179.8°
C36N35C34C380.2°0.2°
N35C36C37H13180.0°180.0°
N35C36C37N391.6°0.8°
N35C36C37H14178.4°179.7°
C34C38C30C310.4°0.1°
C34C38C30N39178.4°179.3°
C34C38C30N26179.8°179.5°
C34C38N39C372.8°1.6°
C34C38N39RU179.5°173.8°
C38C34C33H12179.9°179.8°
C36C37N39C382.9°1.6°
C36C37N39H14180.0°179.4°
C36C37N39RU178.9°172.1°
N29C31C30C38179.8°179.9°
N29C31C30N260.4°0.7°
C31N29C28C270.1°0.0°
C31N29C28H10179.9°179.8°
N29C31C32H110.0°0.3°
C30C31N29C280.1°0.5°
C31C30C38N26179.4°179.4°
C31C30C38N39178.8°179.5°
C31C30N26C270.8°2.4°
C31C30N26RU180.0°173.5°
C30C31C32H11180.0°179.8°
N29C28C27H10180.0°179.7°
N29C28C27N260.4°1.9°
N29C28C27H9179.6°179.3°
C30C38N39C37178.7°179.1°
C30C38N39RU2.0°5.5°
C38C30N26C27179.8°178.2°
C38C30N26RU0.5°7.1°
N39C38C30N261.8°1.1°
C38N39C37RU176.0°173.8°
C38N39RUN261.3°6.7°
C38N39RUN5086.0°81.6°
C38N39RUN2295.0°141.9°
C38N39RUN17178.7°157.8°
C38N39RUN4041.7°43.5°
C38N39C37H14177.1°178.9°
C30N26RUN390.5°7.3°
C30N26C27C280.8°3.1°
C30N26C27RU179.1°168.3°
C30N26RUN5092.7°91.3°
C30N26RUN2295.2°116.7°
C30N26RUN1734.1°53.7°
C30N26RUN40176.7°176.4°
C30N26C27H9179.2°179.7°
C37N39RUN26177.7°179.1°
C37N39RUN5090.4°104.3°
C37N39RUN2288.6°44.0°
C37N39RUN172.4°16.3°
C37N39RUN40134.6°142.4°
N39C37C36H13178.3°179.2°
N39RUN50C533.3°12.0°
N39RUN26C27178.7°176.2°
N39RUN26N5093.2°84.0°
N39RUN26N2294.7°109.5°
N39RUN26N1733.6°61.0°
N39RUN26N40177.1°169.2°
N39RUN50N22172.8°117.5°
N39RUN50N1795.7°86.6°
N39RUN50N40177.0°168.8°
N39RUN50C49177.9°158.0°
N39RUN22N1795.2°79.9°
N39RUN22N40177.1°161.1°
N39RUN17N40177.1°173.2°
N39RUN22C2386.2°104.5°
N39RUN22C1998.4°33.8°
N39RUN17C1685.7°69.3°
N39RUN17C1897.8°63.8°
N39RUN40C4545.4°27.1°
N39RUN40C41135.8°141.3°
RUN39C37H141.1°7.3°
C28C27N26H9180.0°177.3°
C28C27N26RU179.9°171.3°
C52C53N50H20180.0°178.6°
C53C52N51H19180.0°179.9°
C52C53N50RU179.3°167.9°
C52C53N50C490.7°1.2°
C53C52N51C480.1°0.2°
N50C53C52N510.5°0.8°
C53N50RUN2687.6°93.7°
C53N50RUC49178.8°170.0°
C53N50RUN22169.5°105.5°
C53N50RUN1792.4°74.6°
C53N50RUN40179.7°179.2°
C53N50C49C480.6°0.6°
C53N50C49C45179.6°178.6°
N50C53C52H19179.6°179.0°
C52N51C48C490.0°0.7°
C52N51C48C47180.0°179.6°
N51C52C53H20179.5°179.5°
C27N26RUN5088.1°99.8°
C27N26RUN2284.0°74.3°
C27N26RUN17145.1°115.3°
C27N26RUN404.2°14.6°
N26C27C28H10179.5°178.3°
N26RUN50N22102.9°160.8°
N26RUN50N17180.0°168.3°
N26RUN50N4092.7°87.1°
N26RUN50C4993.6°76.3°
N26RUN22N17180.0°176.7°
N26RUN22N4092.3°64.3°
N26RUN17N40149.3°127.4°
N26RUN22C231.4°7.8°
N26RUN22C19176.8°130.6°
N26RUN17C16119.3°10.0°
N26RUN17C1864.1°123.1°
N26RUN40C4588.3°63.3°
N26RUN40C4192.9°105.1°
RUN26C27H90.1°11.4°
N50RUN22N1777.6°149.9°
N50RUN22N4010.1°91.1°
N50RUN17N4083.9°92.3°
N50RUN22C23101.0°34.6°
N50RUN22C1974.4°103.8°
RUN50C49C48179.5°171.5°
RUN50C49C450.8°9.3°
N50RUN17C167.5°150.2°
N50RUN17C18169.1°17.1°
N50RUN40C450.9°10.7°
N50RUN40C41179.7°179.1°
RUN50C53H200.7°10.7°
N50C49C48N510.2°0.3°
C49N50RUN229.3°84.6°
C49N50RUN1786.4°115.4°
C49N50RUN400.9°10.8°
N50C49C48C45179.7°179.2°
N50C49C48C47179.8°180.0°
N50C49C45N400.0°0.3°
N50C49C45C44179.7°179.8°
C49N50C53H20179.3°179.8°
N51C48C49C47180.0°179.7°
N51C48C49C45180.0°179.5°
N51C48C47C46179.8°179.7°
N51C48C47H180.2°0.2°
C48N51C52H19179.9°179.9°
N22RUN17N4088.2°60.1°
RUN22C23C19174.7°133.0°
RUN22C23C24177.6°123.8°
N22RUN17C16179.6°177.6°
N22RUN17C183.0°49.3°
RUN22C19C182.8°38.4°
RUN22C19C20178.2°140.2°
N22RUN40C45177.6°77.5°
N22RUN40C411.2°114.1°
RUN22C23H62.4°48.2°
N17RUN22C23178.6°175.5°
N17RUN22C193.2°46.1°
RUN17C16C18176.1°129.4°
RUN17C16C15177.8°125.2°
RUN17C18C192.4°51.1°
RUN17C18C13178.5°128.3°
N17RUN40C4591.8°130.7°
N17RUN40C4187.0°60.9°
RUN17C16H52.2°50.8°
N40RUN22C2390.9°56.5°
N40RUN22C1984.5°165.1°
RUN40C45C490.8°9.2°
N40RUN17C1691.5°117.5°
N40RUN17C1885.1°109.4°
RUN40C45C41178.9°170.6°
RUN40C45C44179.5°170.7°
RUN40C41C42179.2°167.5°
RUN40C41H150.8°12.4°
N22C23C24H6180.0°172.0°
N22C23C24C251.8°5.7°
C23N22C19C18178.4°174.3°
C23N22C19C202.6°7.2°
N22C23C24H7178.2°174.8°
C24C23N22C192.9°9.2°
C23C24C25H7180.0°179.5°
C23C24C25C200.5°0.4°
C23C24C25H8179.5°176.9°
N22C19C18N170.3°0.2°
N22C19C18C20179.0°178.6°
N22C19C18C13178.8°179.3°
N22C19C20C251.1°1.7°
N22C19C20C11178.8°177.5°
C19N22C23H6177.1°178.8°
C48C49C45N40179.7°179.5°
C48C49C45C440.0°0.6°
C49C48C47C460.2°0.6°
C49C48C47H18179.8°179.8°
C45C49C48C470.0°0.8°
C49C45N40C44179.7°179.9°
C49C45N40C41179.7°179.9°
C49C45C44C460.0°0.2°
C49C45C44N43180.0°179.8°
C48C47C46H18180.0°179.6°
C48C47C46C440.2°0.2°
C48C47C46H17179.8°179.7°
C24C25C20C190.1°2.1°
C24C25C20H8180.0°176.5°
C24C25C20C11179.8°178.7°
C25C24C23H6178.2°177.7°
N17C16C15H5180.0°176.0°
C16N17C18C19179.1°177.5°
C16N17C18C131.8°3.1°
N17C16C15C140.7°2.8°
N17C16C15H4179.3°177.7°
C18N17C16C151.7°4.3°
N17C18C19C13179.1°179.4°
N17C18C19C20179.3°178.8°
N17C18C13C140.9°0.4°
N17C18C13C10179.2°177.7°
C18N17C16H5178.3°179.7°
C16C15C14H4180.0°179.5°
C16C15C14C130.1°0.1°
C16C15C14H3179.9°179.1°
C18C19C20C25179.9°179.8°
C18C19C20C110.2°1.0°
C19C18C13C14179.9°179.8°
C19C18C13C100.1°1.7°
C20C19C18C130.2°0.6°
C19C20C25C11179.9°179.2°
C19C20C11C100.1°1.6°
C19C20C11N12179.9°179.3°
C19C20C25H8179.9°178.7°
C18C13C14C150.0°1.2°
C18C13C14C10180.0°178.1°
C18C13C10C110.0°1.1°
C18C13C10N09180.0°178.4°
C18C13C14H3180.0°179.9°
C45N40C41C420.5°0.0°
N40C45C44C46179.6°179.9°
N40C45C44N430.3°0.1°
C45N40C41H15179.4°179.9°
C41N40C45C440.6°0.0°
N40C41C42H15180.0°179.9°
N40C41C42N430.1°0.1°
N40C41C42H16179.8°180.0°
C25C20C11C10180.0°179.2°
C25C20C11N120.0°0.1°
C20C25C24H7179.5°179.1°
C45C44C46C470.2°0.0°
C45C44C46N43179.9°179.9°
C45C44N43C420.1°0.2°
C45C44C46H17179.8°179.9°
C47C46C44H17180.0°179.9°
C47C46C44N43179.9°180.0°
C20C11C10C130.1°0.6°
C20C11C10N12179.9°179.1°
C20C11C10N09180.0°180.0°
C20C11N12C08180.0°178.7°
C11C20C25H80.2°2.1°
C15C14C13H3180.0°179.0°
C15C14C13C10179.9°179.2°
C14C15C16H5179.3°178.8°
C14C13C10C11179.9°179.1°
C14C13C10N090.0°0.4°
C13C14C15H4179.9°179.4°
C13C10C11N09179.9°179.5°
C13C10C11N12180.0°179.6°
C13C10N09C07179.9°178.5°
C10C13C14H30.1°1.8°
C41C42N43C440.1°0.2°
C41C42N43H16180.0°180.0°
C10C11N12C080.0°2.3°
C11C10N09C070.1°0.9°
N12C11C10N090.1°0.9°
C11N12C08C070.0°1.8°
C11N12C08C05180.0°178.5°
C46C44N43C42180.0°179.9°
C44C46C47H18179.8°179.8°
C44N43C42H16179.9°179.9°
N43C44C46H170.1°0.1°
C10N09C07C080.1°1.3°
C10N09C07C06179.8°179.0°
N12C08C07N090.1°0.1°
N12C08C07C05180.0°179.6°
N12C08C07C06179.7°179.6°
N12C08C05C04180.0°179.5°
N12C08C05H10.0°0.9°
N43C42C41H15179.8°179.8°
N09C07C08C06179.7°179.6°
N09C07C08C05179.9°179.7°
N09C07C06C03179.8°179.4°
N09C07C06H20.2°1.1°
C07C08C05C040.0°0.8°
C08C07C06C030.5°1.0°
C07C08C05H1180.0°179.5°
C08C07C06H2179.5°179.3°
C05C08C07C060.2°0.1°
C08C05C04H1180.0°178.6°
C08C05C04C030.0°0.8°
C08C05C04C54180.0°179.5°
C07C06C03H2180.0°178.3°
C07C06C03C040.5°1.0°
C07C06C03C02179.8°179.4°
C05C04C03C060.2°0.1°
C05C04C03C54179.9°179.6°
C05C04C03C02180.0°179.7°
C05C04C54N550.9°30.3°
C06C03C04C02179.7°179.7°
C06C03C04C54179.7°179.6°
C06C03C02N01179.7°75.0°
C03C04C54N55179.1°150.1°
C04C03C02N010.0°105.3°
C03C04C05H1179.9°179.5°
C04C03C06H2179.5°179.3°
C54C04C03C020.0°0.1°
C54C04C05H10.0°0.9°
C02C03C06H20.3°1.0°
H3C14C15H40.1°0.4°
H4C15C16H50.7°1.7°
H6C23C24H71.8°2.9°
H7C24C25H80.5°2.5°
H9C27C28H100.5°1.0°
H11C32C33H120.0°0.7°
H13C36C37H141.7°0.3°
H15C41C42H160.2°0.1°
H17C46C47H180.2°0.2°
H19C52C53H200.5°0.4°

259987

PDB entries from 2026-09-23

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