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SummaryGeometryRelated PDB entries

EQD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
OAXCAWsing1.36Å1.36Å
CAVCAWdoub1.39Å1.38ÅAromatic
CAVCATsing1.39Å1.38ÅAromatic
OAUCATsing1.36Å1.35Å
CAWCABsing1.39Å1.38ÅAromatic
CATCARdoub1.39Å1.38ÅAromatic
CABCLBsing1.74Å1.72Å
CABCACdoub1.38Å1.40ÅAromatic
CARCACsing1.38Å1.41ÅAromatic
CARCLRsing1.74Å1.76Å
CACCADsing1.51Å1.42Å
CAOCAPdoub1.38Å1.39ÅAromatic
CAOCANsing1.38Å1.39ÅAromatic
CAPCAQsing1.38Å1.39ÅAromatic
CADCAEsing1.53Å1.52Å
CANCAMdoub1.38Å1.39ÅAromatic
CAQCALdoub1.38Å1.39ÅAromatic
CAMCALsing1.38Å1.38ÅAromatic
CALCAKsing1.51Å1.39Å
CAECAFsing1.51Å1.55Å
CAKNAJsing1.47Å1.48Å
CAFNAJsing1.35Å1.35ÅAromatic
CAFNAGdoub1.30Å1.34ÅAromatic
NAJCAIsing1.37Å1.33ÅAromatic
NAGCAHsing1.34Å1.34ÅAromatic
CAICAHdoub1.35Å1.34ÅAromatic
CADH1sing1.09Å1.10Å
CADH2sing1.09Å1.10Å
CAEH3sing1.09Å1.10Å
CAEH4sing1.09Å1.10Å
CAHH5sing1.08Å1.08Å
CAIH6sing1.08Å1.08Å
CAKH7sing1.09Å1.10Å
CAKH8sing1.09Å1.10Å
CAMH9sing1.08Å1.08Å
CANH10sing1.08Å1.08Å
CAOH11sing1.08Å1.08Å
CAPH12sing1.08Å1.08Å
CAQH13sing1.08Å1.08Å
CAVH14sing1.08Å1.08Å
OAUH15sing0.97Å0.95Å
OAXH16sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
OAXCAWCAV121.7°120.1°
OAXCAWCAB116.8°120.0°
CAWOAXH16109.5°114.0°
CAWCAVCAT118.2°120.0°
CAVCAWCAB121.5°119.9°
CAWCAVH14120.9°120.0°
CAVCATOAU121.5°120.0°
CAVCATCAR122.2°119.9°
CATCAVH14120.9°120.0°
OAUCATCAR116.3°120.0°
CATOAUH15109.5°114.0°
CAWCABCLB118.9°120.0°
CAWCABCAC120.3°120.0°
CATCARCAC119.5°120.0°
CATCARCLR117.4°120.0°
CLBCABCAC120.7°120.0°
CABCACCAR118.3°120.1°
CABCACCAD118.9°119.9°
CACCARCLR123.1°120.0°
CARCACCAD122.7°119.9°
CACCADCAE114.5°109.5°
CACCADH1108.2°109.5°
CACCADH2108.2°109.4°
CAPCAOCAN118.8°120.0°
CAOCAPCAQ119.5°120.0°
CAPCAOH11120.6°120.0°
CAOCAPH12120.3°120.0°
CAOCANCAM121.8°120.0°
CAOCANH10119.1°119.9°
CANCAOH11120.6°120.1°
CAPCAQCAL121.8°120.0°
CAQCAPH12120.3°119.9°
CAPCAQH13119.1°120.1°
CADCAECAF111.2°109.5°
CAECADH1108.2°109.5°
CAECADH2108.2°109.4°
CADCAEH3109.0°109.5°
CADCAEH4109.0°109.4°
CANCAMCAL119.4°120.0°
CANCAMH9120.3°120.0°
CAMCANH10119.1°120.0°
CAQCALCAM118.9°120.0°
CAQCALCAK118.7°120.0°
CALCAQH13119.1°120.0°
CAMCALCAK122.4°120.0°
CALCAMH9120.3°120.0°
CALCAKNAJ116.0°109.5°
CALCAKH7107.8°109.5°
CALCAKH8107.8°109.5°
CAECAFNAJ127.5°125.6°
CAECAFNAG122.8°125.7°
CAFCAEH3109.1°109.5°
CAFCAEH4109.0°109.5°
CAKNAJCAF130.3°126.4°
CAKNAJCAI122.8°126.4°
NAJCAKH7107.8°109.5°
NAJCAKH8107.8°109.5°
NAJCAFNAG109.7°108.7°
CAFNAJCAI106.8°107.2°
CAFNAGCAH106.0°109.2°
NAJCAICAH107.8°106.8°
NAJCAIH6126.1°126.6°
NAGCAHCAI109.6°108.1°
NAGCAHH5125.2°126.0°
CAICAHH5125.2°126.0°
CAHCAIH6126.1°126.7°
H1CADH2109.5°109.5°
H3CAEH4109.5°109.5°
H7CAKH8109.4°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
OAXCAWCAVCAB179.4°179.5°
OAXCAWCAVCAT179.6°180.0°
OAXCAWCABCLB0.2°0.3°
OAXCAWCABCAC179.3°180.0°
OAXCAWCAVH140.4°0.5°
CAWCAVCATH14180.0°179.4°
CAWCAVCATOAU180.0°179.7°
CAWCAVCATCAR1.1°0.2°
CAVCAWCABCLB179.6°179.8°
CAVCAWCABCAC0.1°0.5°
CAVCAWOAXH16180.0°90.0°
CAVCATOAUCAR178.9°180.0°
CATCAVCAWCAB1.0°0.5°
CAVCATCARCAC0.1°0.1°
CAVCATCARCLR179.1°180.0°
CAVCATOAUH15180.0°90.1°
OAUCATCARCAC179.1°179.9°
OAUCATCARCLR0.2°0.0°
OAUCATCAVH140.0°0.3°
CAWCABCLBCAC179.5°179.8°
CAWCABCACCAR1.1°0.2°
CAWCABCACCAD178.4°179.7°
CABCAWCAVH14179.0°180.0°
CABCAWOAXH160.6°90.5°
CATCARCACCAB1.0°0.1°
CATCARCACCLR179.2°179.9°
CATCARCACCAD178.2°180.0°
CARCATCAVH14178.9°179.7°
CARCATOAUH151.1°89.9°
CLBCABCACCAR179.4°179.9°
CLBCABCACCAD2.1°0.0°
CABCACCARCAD177.2°179.9°
CABCACCARCLR179.8°180.0°
CABCACCADCAE99.3°89.9°
CABCACCADH121.4°150.1°
CABCACCADH2139.9°30.0°
CARCACCADCAE83.5°90.0°
CARCACCADH1155.8°30.0°
CARCACCADH237.3°150.1°
CLRCARCACCAD2.6°0.1°
CACCADCAEH1120.7°120.0°
CACCADCAEH2120.8°119.9°
CACCADCAECAF160.2°180.0°
CACCADH1H2117.7°120.0°
CACCADCAEH340.0°60.0°
CACCADCAEH479.5°60.0°
CAPCAOCANH11180.0°179.7°
CAOCAPCAQH12180.0°179.7°
CAPCAOCANCAM0.2°0.0°
CAOCAPCAQCAL0.6°0.5°
CAPCAOCANH10179.9°180.0°
CAOCAPCAQH13179.4°180.0°
CANCAOCAPCAQ0.3°0.3°
CAOCANCAMH10180.0°180.0°
CAOCANCAMCAL0.3°0.0°
CAOCANCAMH9179.7°180.0°
CANCAOCAPH12179.7°180.0°
CAPCAQCALH13180.0°179.5°
CAPCAQCALCAM0.7°0.5°
CAPCAQCALCAK179.6°179.7°
CAQCAPCAOH11179.7°180.0°
CADCAECAFH3120.3°120.0°
CADCAECAFH4120.2°119.9°
CADCAECAFNAJ69.3°95.3°
CADCAECAFNAG111.1°84.4°
CAECADH1H2117.7°120.0°
CADCAEH3H4119.2°120.0°
CANCAMCALCAQ0.6°0.3°
CANCAMCALH9180.0°180.0°
CANCAMCALCAK179.4°179.9°
CAMCANCAOH11179.8°179.7°
CAQCALCAMCAK178.8°179.8°
CAQCALCAKNAJ148.2°96.5°
CAQCALCAKH727.3°23.5°
CAQCALCAKH890.8°143.4°
CAQCALCAMH9179.4°179.7°
CALCAQCAPH12179.4°179.7°
CAMCALCAKNAJ32.9°83.7°
CAMCALCAKH7153.9°156.3°
CAMCALCAKH888.0°36.4°
CALCAMCANH10179.7°180.0°
CAMCALCAQH13179.3°180.0°
CALCAKNAJH7120.9°120.0°
CALCAKNAJH8121.0°120.0°
CALCAKNAJCAF100.7°86.8°
CALCAKNAJCAI82.5°93.3°
CALCAKH7H8117.0°120.0°
CAKCALCAMH90.6°0.1°
CAKCALCAQH130.4°0.2°
CAECAFNAJCAK1.5°0.0°
CAECAFNAJNAG179.6°179.8°
CAECAFNAJCAI178.7°180.0°
CAECAFNAGCAH179.5°180.0°
CAFCAECADH179.0°60.0°
CAFCAECADH239.5°60.1°
CAFCAEH3H4119.2°120.0°
CAKNAJCAFCAI177.2°179.9°
CAKNAJCAFNAG178.1°179.7°
CAKNAJCAICAH178.8°179.8°
CAKNAJCAIH61.2°0.3°
NAJCAKH7H8117.1°120.0°
NAJCAFNAGCAH0.2°0.3°
CAFNAJCAICAH1.3°0.1°
NAJCAFCAEH3170.4°24.7°
NAJCAFCAEH450.9°144.8°
CAFNAJCAIH6178.7°179.8°
CAFNAJCAKH720.3°33.2°
CAFNAJCAKH8138.4°153.2°
NAGCAFNAJCAI0.9°0.2°
CAFNAGCAHCAI0.7°0.2°
NAGCAFCAEH39.2°155.5°
NAGCAFCAEH4128.7°35.5°
CAFNAGCAHH5179.3°179.9°
NAJCAICAHNAG1.3°0.0°
NAJCAICAHH6180.0°179.9°
NAJCAICAHH5178.7°180.0°
CAINAJCAKH7156.5°146.7°
CAINAJCAKH838.4°26.8°
NAGCAHCAIH5180.0°179.9°
NAGCAHCAIH6178.8°180.0°
H1CADCAEH3160.7°180.0°
H1CADCAEH441.2°60.0°
H2CADCAEH380.8°60.0°
H2CADCAEH4159.7°180.0°
H5CAHCAIH61.2°0.1°
H9CAMCANH100.3°0.0°
H10CANCAOH110.1°0.3°
H11CAOCAPH120.3°0.3°
H12CAPCAQH130.6°0.3°

219869

PDB entries from 2024-05-15

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