Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

EP5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OC11doub1.21Å1.22Å
CC1sing1.53Å1.52Å
CN1sing1.47Å1.45Å
C9C8doub1.38Å1.40ÅAromatic
C9C4sing1.39Å1.41ÅAromatic
C8C7sing1.40Å1.39ÅAromatic
C1Nsing1.47Å1.46Å
C11Nsing1.35Å1.35Å
C11C12sing1.51Å1.51Å
N1C4sing1.39Å1.41Å
N1C3sing1.47Å1.46Å
C4C5doub1.39Å1.40ÅAromatic
NC2sing1.47Å1.47Å
C7C10sing1.43Å1.28Å
C7C6doub1.40Å1.40ÅAromatic
C10N2trip1.14Å1.16Å
O1C12sing1.43Å1.43Å
O1C13sing1.36Å1.38Å
C3C2sing1.53Å1.52Å
C13C14doub1.38Å1.40ÅAromatic
C13C18sing1.39Å1.41ÅAromatic
C14C15sing1.40Å1.39ÅAromatic
C5C6sing1.38Å1.39ÅAromatic
C18C17doub1.38Å1.40ÅAromatic
C15C16doub1.41Å1.48ÅAromatic
C15C20sing1.47Å1.48ÅAromatic
C17C16sing1.39Å1.39ÅAromatic
C21C20sing1.51Å1.52Å
C21C22sing1.53Å1.52Å
C16N3sing1.38Å1.35ÅAromatic
C20C19doub1.34Å1.40ÅAromatic
C22N4sing1.47Å1.47Å
N3C19sing1.37Å1.36ÅAromatic
C8H1sing1.08Å1.08Å
C9H2sing1.08Å1.08Å
C6H3sing1.08Å1.08Å
C5H4sing1.08Å1.08Å
CH5sing1.09Å1.10Å
CH6sing1.09Å1.10Å
C1H7sing1.09Å1.10Å
C1H8sing1.09Å1.10Å
C3H9sing1.09Å1.10Å
C3H10sing1.09Å1.10Å
C2H11sing1.09Å1.10Å
C2H12sing1.09Å1.10Å
C12H13sing1.09Å1.10Å
C12H14sing1.09Å1.10Å
C14H15sing1.08Å1.08Å
C17H16sing1.08Å1.08Å
C18H17sing1.08Å1.08Å
C19H18sing1.08Å1.08Å
N3H19sing0.97Å1.00Å
C21H20sing1.09Å1.10Å
C21H21sing1.09Å1.10Å
C22H22sing1.09Å1.10Å
C22H23sing1.09Å1.10Å
N4H24sing1.01Å1.00Å
N4H25sing1.01Å1.00Å
N4H26sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OC11N122.4°120.0°
OC11C12115.6°120.0°
C1CN1106.2°109.4°
CC1N104.1°108.5°
C1CH5110.3°109.5°
C1CH6110.3°109.5°
CC1H7110.8°109.6°
CC1H8110.8°109.6°
CN1C4120.6°111.0°
CN1C3116.1°111.2°
N1CH5110.3°109.5°
N1CH6110.3°109.5°
C8C9C4120.8°120.0°
C9C8C7120.0°120.0°
C9C8H1120.0°120.1°
C8C9H2119.6°119.9°
C9C4N1121.1°119.8°
C9C4C5118.7°120.2°
C4C9H2119.6°120.0°
C8C7C10120.3°120.1°
C8C7C6119.5°119.8°
C7C8H1120.0°120.0°
C1NC11121.7°120.9°
C1NC2111.1°118.3°
NC1H7110.8°109.6°
NC1H8110.8°109.7°
NC11C12122.0°120.0°
C11NC2127.1°120.8°
C11C12O1107.5°109.4°
C11C12H13110.0°109.5°
C11C12H14110.0°109.4°
C4N1C3123.3°111.0°
N1C4C5120.3°120.0°
N1C3C2107.6°109.4°
N1C3H9109.9°109.5°
N1C3H10110.0°109.5°
C4C5C6120.4°120.1°
C4C5H4119.8°120.0°
NC2C3108.3°108.5°
NC2H11109.8°109.6°
NC2H12109.8°109.8°
C10C7C6120.2°120.0°
C7C10N2176.0°179.9°
C7C6C5120.6°119.9°
C7C6H3119.7°120.0°
C12O1C13124.6°116.9°
O1C12H13110.0°109.5°
O1C12H14110.0°109.5°
O1C13C14117.6°119.8°
O1C13C18121.9°119.9°
C2C3H9109.9°109.5°
C2C3H10109.9°109.5°
C3C2H11109.8°109.7°
C3C2H12109.8°109.6°
C14C13C18120.5°120.3°
C13C14C15118.9°119.6°
C13C14H15120.6°120.2°
C13C18C17121.7°120.6°
C13C18H17119.2°119.7°
C14C15C16120.7°120.0°
C14C15C20133.8°134.0°
C15C14H15120.5°120.2°
C5C6H3119.7°120.1°
C6C5H4119.8°119.9°
C18C17C16119.6°120.0°
C18C17H16120.2°120.0°
C17C18H17119.2°119.7°
C16C15C20105.5°106.1°
C15C16C17118.6°119.5°
C15C16N3107.3°107.1°
C15C20C21128.4°126.4°
C15C20C19104.7°107.0°
C17C16N3134.1°133.4°
C16C17H16120.2°120.0°
C20C21C22113.1°109.5°
C21C20C19126.8°126.5°
C20C21H20108.6°109.5°
C20C21H21108.5°109.5°
C21C22N4111.1°109.5°
C22C21H20108.6°109.4°
C22C21H21108.6°109.5°
C21C22H22109.0°109.4°
C21C22H23109.0°109.5°
C16N3C19111.0°109.9°
C16N3H19124.5°125.1°
C20C19N3111.4°110.0°
C20C19H18124.3°125.0°
N4C22H22109.0°109.5°
N4C22H23109.1°109.5°
C22N4H24109.5°109.4°
C22N4H25109.5°109.5°
C22N4H26109.5°109.5°
N3C19H18124.3°125.0°
C19N3H19124.5°125.1°
H5CH6109.5°109.5°
H7C1H8109.5°109.8°
H9C3H10109.5°109.5°
H11C2H12109.5°109.7°
H13C12H14109.4°109.5°
H20C21H21109.4°109.5°
H22C22H23109.5°109.5°
H24N4H25109.5°109.5°
H24N4H26109.5°109.5°
H25N4H26109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OC11NC110.9°0.0°
OC11NC12179.7°180.0°
OC11NC2168.2°179.9°
OC11C12O174.3°0.0°
OC11C12H13165.9°120.0°
OC11C12H1445.4°120.0°
C1CN1H5119.5°120.0°
C1CN1H6119.5°120.0°
CC1NH7119.2°119.7°
CC1NH8119.1°119.7°
CC1NC11109.7°128.9°
C1CN1C4118.4°172.8°
C1CN1C361.1°63.1°
CC1NC269.5°51.2°
C1CH5H6121.5°120.0°
CC1H7H8122.5°120.5°
CN1C4C943.0°55.7°
N1CC1N63.6°53.9°
CN1C4C3179.5°124.3°
CN1C4C5136.2°124.0°
CN1C3C254.7°63.1°
N1CH5H6121.5°120.1°
N1CC1H755.5°65.9°
N1CC1H8177.3°173.6°
CN1C3H965.0°56.9°
CN1C3H10174.4°176.9°
C8C9C4H2180.0°180.0°
C9C8C7H1180.0°179.9°
C8C9C4N1179.4°180.0°
C8C9C4C50.2°0.3°
C9C8C7C10179.8°180.0°
C9C8C7C60.2°0.2°
C4C9C8C70.1°0.0°
C9C4N1C5179.2°179.7°
C9C4N1C3137.5°180.0°
C9C4C5C60.4°0.2°
C4C9C8H1179.9°180.0°
C9C4C5H4179.6°179.7°
C8C7C10C6180.0°179.7°
C8C7C10N229.6°58.7°
C8C7C6C50.0°0.3°
C7C8C9H2179.9°180.0°
C8C7C6H3180.0°179.7°
C1NC11C2179.2°179.9°
C1NC11C12169.3°180.0°
C1NC2C364.5°51.2°
NC1CH555.9°173.8°
NC1CH6176.9°66.2°
NC1H7H8122.5°120.5°
C1NC2H1155.3°170.9°
C1NC2H12175.7°68.5°
NC11C12O1105.4°180.0°
C11NC2C3114.7°128.9°
C11NC1H7131.1°111.4°
C11NC1H89.4°9.2°
C11NC2H11125.5°9.1°
C11NC2H125.1°111.4°
NC11C12H1314.3°60.0°
NC11C12H14134.9°60.0°
C12C11NC211.5°0.1°
C11C12O1H13119.7°120.0°
C11C12O1H14119.7°120.0°
C11C12O1C13167.4°180.0°
C11C12H13H14120.9°120.0°
C4N1C3C2124.9°172.7°
N1C4C5C6179.6°179.9°
N1C4C9H20.6°0.0°
N1C4C5H40.4°0.1°
C4N1CH5122.1°52.8°
C4N1CH61.0°67.3°
C4N1C3H9115.4°67.3°
C4N1C3H105.2°52.8°
C3N1C4C543.3°0.3°
N1C3C2N52.3°53.8°
N1C3C2H9119.7°120.0°
N1C3C2H10119.7°119.9°
C3N1CH558.4°177.0°
C3N1CH6179.4°56.9°
N1C3H9H10120.9°120.0°
N1C3C2H1167.5°173.5°
N1C3C2H12172.1°66.1°
C4C5C6C70.3°0.1°
C4C5C6H4180.0°179.9°
C5C4C9H2179.8°179.8°
C4C5C6H3179.7°180.0°
NC2C3H11119.8°119.7°
NC2C3H12119.8°119.9°
C2NC1H749.6°68.5°
C2NC1H8171.3°170.9°
NC2C3H967.4°66.2°
NC2C3H10172.0°173.8°
NC2H11H12120.5°120.6°
C10C7C6C5179.9°180.0°
C10C7C8H10.1°0.0°
C10C7C6H30.0°0.0°
C6C7C10N2150.4°121.5°
C7C6C5H3180.0°179.9°
C6C7C8H1179.8°179.7°
C7C6C5H4179.6°180.0°
C12O1C13C14150.9°180.0°
C12O1C13C1829.9°0.3°
O1C12H13H14120.9°120.1°
O1C13C14C18179.3°179.7°
O1C13C14C15179.7°180.0°
O1C13C18C17179.5°179.8°
C13O1C12H1372.8°60.0°
C13O1C12H1447.7°60.0°
O1C13C14H150.3°0.1°
O1C13C18H170.4°0.1°
C2C3H9H10120.8°120.1°
C3C2H11H12120.5°120.4°
C13C14C15H15180.0°179.9°
C14C13C18C170.3°0.6°
C13C14C15C160.4°0.0°
C13C14C15C20179.4°180.0°
C14C13C18H17179.7°179.7°
C18C13C14C150.4°0.3°
C13C18C17H17180.0°179.7°
C13C18C17C160.1°0.6°
C18C13C14H15179.6°179.8°
C13C18C17H16179.9°179.7°
C14C15C16C20179.8°180.0°
C14C15C16C170.2°0.0°
C14C15C20C211.3°0.1°
C14C15C16N3179.9°180.0°
C14C15C20C19179.9°180.0°
C18C17C16C150.1°0.3°
C18C17C16H16180.0°179.7°
C18C17C16N3179.6°179.7°
C15C16C17N3179.5°180.0°
C16C15C20C21178.9°180.0°
C16C15C20C190.3°0.0°
C15C16N3C190.2°0.1°
C16C15C14H15179.6°180.0°
C15C16C17H16179.9°180.0°
C15C16N3H19179.8°179.9°
C20C15C16C17179.6°180.0°
C15C20C21C19178.3°180.0°
C15C20C21C2248.4°85.0°
C20C15C16N30.1°0.0°
C15C20C19N30.4°0.0°
C20C15C14H150.6°0.1°
C15C20C19H18179.6°180.0°
C15C20C21H20169.0°155.0°
C15C20C21H2172.1°35.0°
C17C16N3C19179.8°180.0°
C16C17C18H17179.9°179.8°
C17C16N3H190.2°0.1°
C20C21C22H20120.5°120.0°
C20C21C22H21120.5°120.1°
C20C21C22N4156.2°180.0°
C21C20C19N3179.1°179.9°
C21C20C19H180.9°0.0°
C20C21H20H21118.3°120.0°
C20C21C22H2283.5°60.0°
C20C21C22H2336.0°59.9°
C22C21C20C19133.2°95.0°
C21C22N4H22120.2°120.0°
C21C22N4H23120.2°120.0°
C22C21H20H21118.4°120.0°
C21C22H22H23119.2°120.0°
C21C22N4H24180.0°60.0°
C21C22N4H2560.0°60.0°
C21C22N4H2660.0°180.0°
C16N3C19C200.4°0.1°
C16N3C19H19180.0°179.9°
N3C16C17H160.4°0.0°
C16N3C19H18179.6°180.0°
C20C19N3H18180.0°179.9°
C20C19N3H19179.5°179.9°
C19C20C21H2012.7°25.0°
C19C20C21H21106.2°145.0°
N4C22C21H2035.7°60.0°
N4C22C21H2183.2°60.0°
N4C22H22H23119.3°120.0°
C22N4H24H25120.0°119.9°
C22N4H24H26120.0°120.0°
C22N4H25H26120.0°120.0°
H1C8C9H20.1°0.1°
H3C6C5H40.3°0.1°
H5CC1H7175.0°54.1°
H5CC1H863.3°66.5°
H6CC1H763.9°174.1°
H6CC1H857.8°53.5°
H9C3C2H11172.8°53.5°
H9C3C2H1252.4°174.0°
H10C3C2H1152.2°66.5°
H10C3C2H1268.2°53.9°
H16C17C18H170.1°0.0°
H18C19N3H190.5°0.1°
H20C21C22H22155.9°180.0°
H20C21C22H2384.6°60.0°
H21C21C22H2237.0°60.0°
H21C21C22H23156.5°180.0°
H22C22N4H2459.8°180.0°
H22C22N4H25179.8°60.0°
H22C22N4H2660.3°60.0°
H23C22N4H2459.8°60.0°
H23C22N4H2560.2°180.0°
H23C22N4H26179.8°60.0°
H24N4H25H26119.9°120.1°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon