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ENA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2doub1.34Å1.35ÅAromatic
N1C6sing1.34Å1.35ÅAromatic
N1C10sing1.36Å1.32ÅAromatic
O1P1doub1.55Å1.50Å
P1O2sing1.61Å1.59Å
P1O3sing1.54Å1.52Å
P1O5'sing1.61Å1.58Å
C2N3sing1.31Å1.38ÅAromatic
O2P2sing1.61Å1.58Å
P2O4sing1.61Å1.57Å
P2O5sing1.54Å1.51Å
P2O6doub1.54Å1.51Å
N3C8doub1.33Å1.37ÅAromatic
C4N7doub1.30Å1.34ÅAromatic
C4N9sing1.36Å1.36ÅAromatic
O4C6'sing1.43Å1.39Å
C5C6doub1.41Å1.38ÅAromatic
C5N7sing1.35Å1.36ÅAromatic
C5C8sing1.40Å1.41ÅAromatic
C6N6sing1.37Å1.36ÅAromatic
N6C9sing1.37Å1.36ÅAromatic
C8N9sing1.37Å1.36ÅAromatic
C9C10doub1.34Å1.37ÅAromatic
N9C1'sing1.46Å1.44Å
C0'C8'sing1.55Å1.47Å
C0'O8'sing1.43Å1.39Å
C0'C9'sing1.55Å1.46Å
C1'C2'sing1.55Å1.48Å
C1'O2'sing1.44Å1.40Å
N11C12doub1.32Å1.36ÅAromatic
N11C16sing1.32Å1.37ÅAromatic
N11C9'sing1.47Å1.48Å
C12C13sing1.40Å1.40ÅAromatic
C13C14doub1.40Å1.40ÅAromatic
C13C17sing1.48Å1.48Å
C14C15sing1.38Å1.40ÅAromatic
C15C16doub1.38Å1.40ÅAromatic
C17N17sing1.35Å1.42Å
C17O17doub1.22Å1.21Å
C2'C3'sing1.55Å1.46Å
C2'O4'sing1.43Å1.38Å
O2'C4'sing1.44Å1.39Å
C3'O3'sing1.43Å1.36Å
C3'C4'sing1.54Å1.50Å
C4'C5'sing1.53Å1.52Å
C5'O5'sing1.43Å1.43Å
C6'C7'sing1.53Å1.49Å
O6'C7'sing1.44Å1.39Å
O6'C9'sing1.44Å1.39Å
C7'C8'sing1.54Å1.50Å
O7'C8'sing1.43Å1.40Å
C2H2sing1.08Å1.08Å
C4H4sing1.08Å1.08Å
N6HN6sing0.97Å1.00Å
C9H9sing1.08Å1.08Å
C0'H0'sing1.09Å1.10Å
C1'H1'sing1.09Å1.10Å
C10H10sing1.08Å1.08Å
C12H12sing1.08Å1.08Å
C14H14sing1.08Å1.08Å
C15H15sing1.08Å1.08Å
C16H16sing1.08Å1.08Å
N17HN17sing0.97Å1.00Å
N17HN1Asing0.97Å1.00Å
C2'H2'sing1.09Å1.10Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C4'H4'sing1.09Å1.10Å
O4'HO4'sing0.97Å0.95Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
C6'H6'sing1.09Å1.10Å
C6'H6'Asing1.09Å1.10Å
C7'H7'sing1.09Å1.10Å
O7'HO7'sing0.97Å0.95Å
C8'H8'sing1.09Å1.10Å
O8'HO8'sing0.97Å0.95Å
C9'H9'sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C6121.1°120.3°
C2N1C10132.0°131.5°
N1C2N3120.1°122.4°
N1C2H2120.0°118.7°
C6N1C10106.8°108.2°
N1C6C5120.4°118.9°
N1C6N6110.9°108.2°
N1C10C9108.8°108.7°
N1C10H10125.6°125.6°
O1P1O2105.9°109.5°
O1P1O3114.2°109.5°
O1P1O5'107.9°109.5°
O2P1O3111.4°109.5°
O2P1O5'109.3°109.4°
P1O2P2124.7°133.9°
O3P1O5'108.0°109.5°
P1O5'C5'120.3°123.0°
C2N3C8120.8°121.1°
N3C2H2120.0°118.8°
O2P2O4104.1°109.4°
O2P2O5109.7°109.5°
O2P2O6109.8°109.5°
O4P2O5111.2°109.5°
O4P2O6111.2°109.5°
P2O4C6'122.0°123.0°
O5P2O6110.7°109.5°
N3C8C5118.7°119.2°
N3C8N9135.4°134.8°
N7C4N9111.5°109.9°
C4N7C5105.7°109.5°
N7C4H4124.2°125.1°
C4N9C8107.3°107.4°
C4N9C1'124.4°126.3°
N9C4H4124.2°125.0°
O4C6'C7'115.8°109.5°
O4C6'H6'107.4°109.5°
O4C6'H6'A107.4°109.5°
C6C5N7131.6°134.7°
C6C5C8118.9°118.1°
C5C6N6128.7°132.9°
N7C5C8109.5°107.2°
C5C8N9105.9°106.0°
C6N6C9104.7°107.2°
C6N6HN6127.6°126.4°
N6C9C10108.8°107.7°
C9N6HN6127.6°126.4°
N6C9H9125.6°126.1°
C8N9C1'128.2°126.3°
C10C9H9125.6°126.2°
C9C10H10125.6°125.7°
N9C1'C2'124.2°110.6°
N9C1'O2'121.7°110.7°
N9C1'H1'77.0°110.6°
C8'C0'O8'114.6°110.9°
C8'C0'C9'101.5°102.1°
C0'C8'C7'101.4°104.2°
C0'C8'O7'109.3°110.5°
C8'C0'H0'111.0°110.9°
C0'C8'H8'115.1°110.5°
O8'C0'C9'108.1°110.8°
O8'C0'H0'104.8°110.8°
C0'O8'HO8'109.5°114.0°
C0'C9'N11117.8°110.6°
C0'C9'O6'104.5°103.5°
C9'C0'H0'117.3°110.9°
C0'C9'H9'109.3°110.7°
C2'C1'O2'109.6°103.5°
C1'C2'C3'105.2°102.1°
C1'C2'O4'113.9°110.9°
C2'C1'H1'105.1°110.6°
C1'C2'H2'110.9°110.9°
C1'O2'C4'108.6°107.0°
O2'C1'H1'110.7°110.7°
C12N11C16119.6°121.9°
C12N11C9'121.4°119.1°
N11C12C13122.7°120.6°
N11C12H12118.7°119.7°
C16N11C9'119.0°119.1°
N11C16C15119.0°121.1°
N11C16H16120.5°119.4°
N11C9'O6'114.6°110.6°
N11C9'H9'97.9°110.5°
C12C13C14118.8°118.9°
C12C13C17118.6°120.6°
C13C12H12118.7°119.7°
C14C13C17122.6°120.6°
C13C14C15117.3°118.3°
C13C14H14121.3°120.9°
C13C17N17119.3°120.0°
C13C17O17118.5°120.0°
C14C15C16122.5°119.3°
C15C14H14121.3°120.8°
C14C15H15118.7°120.4°
C16C15H15118.7°120.3°
C15C16H16120.5°119.5°
N17C17O17120.4°120.0°
C17N17HN17120.0°120.0°
C17N17HN1A120.0°120.0°
C3'C2'O4'113.6°110.9°
C2'C3'O3'111.1°110.5°
C2'C3'C4'105.4°104.2°
C3'C2'H2'111.2°110.9°
C2'C3'H3'111.9°110.5°
O4'C2'H2'102.1°110.8°
C2'O4'HO4'109.5°114.0°
O2'C4'C3'109.3°107.3°
O2'C4'C5'111.4°109.9°
O2'C4'H4'109.5°109.8°
O3'C3'C4'111.7°110.5°
O3'C3'H3'105.6°110.4°
C3'O3'HO3'109.5°114.0°
C3'C4'C5'112.8°109.9°
C4'C3'H3'111.3°110.6°
C3'C4'H4'108.0°109.9°
C4'C5'O5'114.8°109.5°
C5'C4'H4'105.8°110.1°
C4'C5'H5'107.7°109.5°
C4'C5'H5'A107.8°109.5°
O5'C5'H5'107.7°109.5°
O5'C5'H5'A107.7°109.5°
C6'C7'O6'108.2°109.9°
C6'C7'C8'111.2°109.9°
C7'C6'H6'107.4°109.4°
C7'C6'H6'A107.4°109.5°
C6'C7'H7'108.4°109.9°
C7'O6'C9'108.6°107.0°
O6'C7'C8'106.8°107.3°
O6'C7'H7'112.6°109.8°
O6'C9'H9'113.0°110.7°
C7'C8'O7'110.5°110.5°
C8'C7'H7'109.6°110.0°
C7'C8'H8'114.0°110.5°
C8'O7'HO7'109.5°114.0°
O7'C8'H8'106.7°110.6°
HN17N17HN1A120.0°120.0°
H5'C5'H5'A111.1°109.4°
H6'C6'H6'A111.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2N1C6C10178.2°179.8°
N1C2N3H2180.0°180.0°
N1C2N3C80.5°0.0°
C2N1C6C51.3°0.0°
C2N1C6N6178.6°180.0°
C2N1C10C9178.5°179.9°
C2N1C10H101.5°0.0°
C6N1C2N31.1°0.0°
N1C6C5N6179.9°180.0°
N1C6C5N7179.4°179.9°
N1C6C5C81.0°0.0°
N1C6N6C90.0°0.0°
C6N1C10C90.5°0.3°
C6N1C2H2178.9°180.0°
N1C6N6HN6180.0°180.0°
C6N1C10H10179.5°179.7°
C10N1C2N3178.8°179.7°
C10N1C6C5179.6°179.8°
C10N1C6N60.3°0.2°
N1C10C9N60.5°0.3°
N1C10C9H10180.0°180.0°
C10N1C2H21.1°0.3°
N1C10C9H9179.5°179.9°
O1P1O2O3124.8°120.0°
O1P1O2O5'116.0°120.0°
O1P1O3O5'120.0°120.0°
O1P1O2P2159.2°45.0°
O1P1O5'C5'47.6°55.0°
O2P1O3O5'120.0°120.0°
P1O2P2O4153.1°165.0°
P1O2P2O587.9°75.0°
P1O2P2O634.0°45.0°
O2P1O5'C5'67.1°175.0°
O3P1O2P234.4°75.0°
O3P1O5'C5'171.6°65.0°
O5'P1O2P284.8°165.0°
P1O5'C5'C4'148.0°180.0°
P1O5'C5'H5'28.0°60.0°
P1O5'C5'H5'A92.0°60.0°
C2N3C8C50.2°0.1°
C2N3C8N9178.5°180.0°
O2P2O4O5118.0°120.0°
O2P2O4O6118.1°120.0°
O2P2O5O6121.3°120.0°
O2P2O4C6'39.1°175.0°
O4P2O5O6124.1°120.0°
P2O4C6'C7'167.8°180.0°
P2O4C6'H6'47.8°60.0°
P2O4C6'H6'A72.2°60.0°
O5P2O4C6'157.1°65.0°
O6P2O4C6'79.0°55.0°
N3C8N9C4178.8°180.0°
N3C8C5C60.4°0.0°
N3C8C5N7179.2°180.0°
N3C8C5N9179.0°180.0°
N3C8N9C1'2.2°0.0°
C8N3C2H2179.4°180.0°
N7C4N9H4180.0°180.0°
C4N7C5C6178.3°180.0°
C4N7C5C80.2°0.0°
N7C4N9C80.1°0.0°
N7C4N9C1'176.9°180.0°
N9C4N7C50.2°0.0°
C4N9C8C50.0°0.0°
C4N9C8C1'176.6°180.0°
C4N9C1'C2'58.2°95.0°
C4N9C1'O2'95.6°19.1°
C4N9C1'H1'157.8°142.1°
O4C6'C7'H6'120.0°120.0°
O4C6'C7'H6'A120.0°120.0°
O4C6'C7'O6'49.9°66.4°
O4C6'C7'C8'67.2°175.7°
O4C6'H6'H6'A117.4°120.0°
O4C6'C7'H7'172.3°54.5°
C6C5N7C8178.5°179.9°
C5C6N6C9179.9°180.0°
C6C5C8N9178.6°180.0°
C5C6N6HN60.1°0.0°
N7C5C6N60.5°0.0°
N7C5C8N90.1°0.0°
C5N7C4H4179.8°180.0°
C8C5C6N6178.9°179.9°
C5C8N9C1'176.6°180.0°
C6N6C9HN6180.0°180.0°
C6N6C9C100.3°0.2°
C6N6C9H9179.7°180.0°
N6C9C10H9180.0°179.8°
N6C9C10H10179.5°179.7°
C8N9C1'C2'125.7°85.0°
C8N9C1'O2'80.4°160.9°
C8N9C4H4179.9°180.0°
C8N9C1'H1'26.1°37.8°
C10C9N6HN6179.7°179.8°
N9C1'C2'O2'156.5°118.5°
N9C1'C2'H1'84.4°122.8°
N9C1'O2'H1'87.3°123.0°
N9C1'C2'C3'170.3°155.5°
N9C1'C2'O4'64.6°86.3°
N9C1'O2'C4'168.9°158.5°
C1'N9C4H43.1°0.0°
N9C1'C2'H2'49.9°37.3°
C8'C0'O8'C9'112.3°112.7°
C8'C0'O8'H0'122.0°123.7°
C8'C0'C9'H0'121.1°118.3°
C8'C0'C9'N11169.6°155.5°
C0'C8'C7'C6'96.6°121.5°
C0'C8'C7'O6'21.2°2.0°
C8'C0'C9'O6'41.2°37.0°
C0'C8'C7'O7'115.7°118.7°
C0'C8'C7'H8'124.2°118.7°
C0'C8'O7'H8'125.0°122.6°
C0'C8'C7'H7'143.6°117.5°
C0'C8'O7'HO7'180.0°61.5°
C8'C0'O8'HO8'180.0°61.5°
C8'C0'C9'H9'80.0°81.6°
O8'C0'C9'H0'118.0°123.5°
O8'C0'C9'N1169.5°86.3°
O8'C0'C9'O6'162.1°155.2°
O8'C0'C8'C7'153.2°139.0°
O8'C0'C8'O7'36.5°20.4°
O8'C0'C8'H8'83.4°102.3°
O8'C0'C9'H9'40.9°36.6°
C0'C9'N11C12141.4°100.0°
C0'C9'N11C1637.2°80.2°
C0'C9'N11O6'123.5°114.1°
C0'C9'N11H9'116.8°123.0°
C0'C9'O6'C7'28.5°40.0°
C0'C9'O6'H9'118.7°118.6°
C9'C0'C8'C7'37.0°20.9°
C9'C0'C8'O7'79.6°97.7°
C9'C0'C8'H8'160.5°139.6°
C9'C0'O8'HO8'67.7°174.2°
C2'C1'O2'H1'115.5°118.6°
C1'C2'C3'O4'125.3°118.2°
C1'C2'C3'H2'120.2°118.2°
C1'C2'O4'H2'119.6°123.6°
C2'C1'O2'C4'11.6°40.0°
C1'C2'C3'O3'110.8°97.8°
C1'C2'C3'C4'10.3°20.9°
C1'C2'C3'H3'131.4°139.7°
C1'C2'O4'HO4'180.0°180.0°
O2'C1'C2'C3'13.8°37.0°
O2'C1'C2'O4'138.9°155.2°
C1'O2'C4'C3'4.8°26.5°
C1'O2'C4'C5'130.1°145.9°
O2'C1'C2'H2'106.6°81.2°
C1'O2'C4'H4'113.3°92.9°
C12N11C16C9'178.6°179.7°
N11C12C13H12180.0°179.9°
N11C12C13C140.0°0.0°
N11C12C13C17177.8°180.0°
C12N11C16C151.7°0.1°
C12N11C9'O6'95.2°145.9°
C12N11C16H16178.3°180.0°
C12N11C9'H9'24.6°22.9°
C16N11C12C131.5°0.1°
N11C16C15C140.5°0.0°
N11C16C15H16180.0°180.0°
C16N11C9'O6'86.3°33.8°
C16N11C12H12178.5°180.0°
N11C16C15H15179.5°179.9°
C16N11C9'H9'153.9°156.8°
C9'N11C12C13177.0°179.8°
C9'N11C16C15176.9°179.8°
N11C9'O6'C7'158.9°158.5°
N11C9'O6'H9'110.9°122.9°
N11C9'C0'H0'48.5°37.2°
C9'N11C12H123.0°0.3°
C9'N11C16H163.1°0.3°
C12C13C14C17177.8°180.0°
C12C13C14C151.1°0.0°
C12C13C17N174.9°180.0°
C12C13C17O17160.1°0.0°
C12C13C14H14178.8°180.0°
C13C14C15H14180.0°180.0°
C13C14C15C160.9°0.0°
C14C13C17N17177.3°0.0°
C14C13C17O1717.7°180.0°
C14C13C12H12180.0°180.0°
C13C14C15H15179.1°180.0°
C17C13C14C15178.9°180.0°
C13C17N17O17164.7°180.0°
C17C13C12H122.1°0.0°
C17C13C14H141.1°0.0°
C13C17N17HN17164.7°0.0°
C13C17N17HN1A15.3°180.0°
C14C15C16H15180.0°180.0°
C14C15C16H16179.5°180.0°
C16C15C14H14179.1°180.0°
C17N17HN17HN1A180.0°180.0°
O17C17N17HN170.0°180.0°
O17C17N17HN1A180.0°0.0°
C3'C2'O4'H2'119.9°123.7°
C2'C3'C4'O2'3.9°2.0°
C2'C3'O3'C4'117.4°114.8°
C2'C3'O3'H3'121.5°122.6°
C2'C3'C4'H3'121.5°118.8°
C2'C3'C4'C5'120.6°121.4°
C3'C2'C1'H1'105.3°81.6°
C2'C3'O3'HO3'180.0°61.4°
C2'C3'C4'H4'122.9°117.3°
C3'C2'O4'HO4'59.5°67.3°
O4'C2'C3'O3'14.5°20.3°
O4'C2'C3'C4'135.6°139.1°
O4'C2'C1'H1'19.9°36.6°
O4'C2'C3'H3'103.3°102.1°
O2'C4'C3'O3'116.9°120.7°
O2'C4'C3'C5'124.5°119.4°
O2'C4'C3'H4'119.0°119.3°
O2'C4'C5'H4'118.8°121.1°
O2'C4'C5'O5'173.6°66.5°
C4'O2'C1'H1'103.9°78.5°
O2'C4'C3'H3'125.3°116.8°
O2'C4'C5'H5'66.4°173.5°
O2'C4'C5'H5'A53.5°53.6°
O3'C3'C4'H3'117.8°122.5°
O3'C3'C4'C5'118.6°119.9°
O3'C3'C2'H2'129.0°144.0°
O3'C3'C4'H4'2.2°1.4°
C3'C4'C5'H4'117.8°121.1°
C3'C4'C5'O5'63.1°175.7°
C4'C3'C2'H2'109.8°97.3°
C4'C3'O3'HO3'62.6°176.2°
C3'C4'C5'H5'56.9°55.7°
C3'C4'C5'H5'A176.9°64.2°
C4'C5'O5'H5'120.0°120.0°
C4'C5'O5'H5'A120.0°120.0°
C5'C4'C3'H3'0.8°2.7°
C4'C5'H5'H5'A117.8°120.0°
O5'C5'C4'H4'54.7°54.6°
O5'C5'H5'H5'A117.8°120.0°
C6'C7'O6'C8'119.8°119.4°
C6'C7'O6'H7'119.7°121.0°
C6'C7'O6'C9'124.0°145.9°
C6'C7'C8'H7'119.8°121.1°
C6'C7'C8'O7'147.6°119.9°
C7'C6'H6'H6'A117.4°120.0°
C6'C7'C8'H8'27.6°2.8°
O6'C7'C8'H7'122.3°119.4°
O6'C7'C8'O7'94.5°120.6°
O6'C7'C6'H6'169.9°53.6°
O6'C7'C6'H6'A70.1°173.6°
O6'C7'C8'H8'145.4°116.7°
C7'O6'C9'H9'90.2°78.6°
C9'O6'C7'C8'4.2°26.5°
O6'C9'C0'H0'79.9°81.2°
C9'O6'C7'H7'116.2°93.1°
C7'C8'O7'H8'124.4°122.7°
C7'C8'C0'H0'88.4°97.4°
C8'C7'C6'H6'52.8°64.3°
C8'C7'C6'H6'A172.9°55.7°
C7'C8'O7'HO7'69.3°176.2°
O7'C8'C0'H0'155.0°144.0°
O7'C8'C7'H7'27.8°1.2°
HN6N6C9H90.3°0.0°
H9C9C10H100.5°0.1°
H0'C0'C8'H8'35.1°21.3°
H0'C0'O8'HO8'58.1°62.2°
H0'C0'C9'H9'158.9°160.1°
H1'C1'C2'H2'134.4°160.2°
H14C14C15H150.9°0.1°
H15C15C16H160.5°0.0°
H2'C2'C3'H3'11.2°21.5°
H2'C2'O4'HO4'60.4°56.4°
H3'C3'O3'HO3'58.5°61.2°
H3'C3'C4'H4'115.7°123.9°
H4'C4'C5'H5'174.7°65.4°
H4'C4'C5'H5'A65.3°174.6°
H6'C6'C7'H7'67.7°174.6°
H6'AC6'C7'H7'52.3°65.4°
H7'C7'C8'H8'92.2°123.9°
HO7'O7'C8'H8'55.1°61.1°

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PDB entries from 2024-07-17

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