EME
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C7 | N | sing | 1.47Å | 1.38Å | |
N | CA | sing | 1.47Å | 1.47Å | |
CB | CA | sing | 1.53Å | 1.53Å | |
CB | CG | sing | 1.53Å | 1.54Å | |
CA | C | sing | 1.51Å | 1.53Å | |
OE2 | CD | doub | 1.21Å | 1.29Å | |
O | C | doub | 1.21Å | 1.24Å | |
CD | CG | sing | 1.51Å | 1.57Å | |
CD | OE1 | sing | 1.34Å | 1.27Å | |
C | OXT | sing | 1.34Å | 1.48Å | |
C7 | H1 | sing | 1.09Å | 1.10Å | |
C7 | H4 | sing | 1.09Å | 1.10Å | |
C7 | H3 | sing | 1.09Å | 1.10Å | |
N | H | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | H7 | sing | 1.09Å | 1.10Å | |
CB | H8 | sing | 1.09Å | 1.10Å | |
CG | H9 | sing | 1.09Å | 1.10Å | |
CG | H10 | sing | 1.09Å | 1.10Å | |
OE1 | H11 | sing | 0.97Å | 0.95Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C7 | N | CA | 124.3° | 111.0° |
N | C7 | H1 | 109.5° | 109.4° |
N | C7 | H4 | 109.5° | 109.5° |
N | C7 | H3 | 109.5° | 109.5° |
C7 | N | H | 105.7° | 111.0° |
N | CA | CB | 111.4° | 109.5° |
N | CA | C | 107.2° | 109.5° |
CA | N | H | 105.6° | 110.9° |
N | CA | HA | 109.0° | 109.5° |
CA | CB | CG | 110.6° | 109.4° |
CB | CA | C | 112.5° | 109.5° |
CB | CA | HA | 108.3° | 109.5° |
CA | CB | H7 | 109.2° | 109.5° |
CA | CB | H8 | 109.2° | 109.5° |
CB | CG | CD | 108.4° | 109.4° |
CG | CB | H7 | 109.2° | 109.5° |
CG | CB | H8 | 109.2° | 109.5° |
CB | CG | H9 | 109.8° | 109.5° |
CB | CG | H10 | 109.7° | 109.5° |
CA | C | O | 125.2° | 120.0° |
CA | C | OXT | 109.8° | 120.0° |
C | CA | HA | 108.3° | 109.4° |
OE2 | CD | CG | 114.2° | 120.0° |
OE2 | CD | OE1 | 127.6° | 120.0° |
O | C | OXT | 124.9° | 120.0° |
CG | CD | OE1 | 118.0° | 120.0° |
CD | CG | H9 | 109.7° | 109.4° |
CD | CG | H10 | 109.8° | 109.4° |
CD | OE1 | H11 | 109.5° | 116.9° |
C | OXT | HXT | 109.5° | 117.0° |
H1 | C7 | H4 | 109.5° | 109.4° |
H1 | C7 | H3 | 109.4° | 109.4° |
H4 | C7 | H3 | 109.5° | 109.5° |
H7 | CB | H8 | 109.4° | 109.5° |
H9 | CG | H10 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C7 | N | CA | H | 122.0° | 123.9° |
C7 | N | CA | CB | 54.4° | 153.9° |
C7 | N | CA | C | 69.1° | 86.2° |
N | C7 | H1 | H4 | 120.0° | 120.0° |
N | C7 | H1 | H3 | 120.0° | 120.0° |
N | C7 | H4 | H3 | 120.0° | 120.1° |
C7 | N | CA | HA | 173.9° | 33.8° |
N | CA | CB | C | 120.4° | 120.0° |
N | CA | CB | HA | 119.9° | 120.0° |
N | CA | CB | CG | 175.8° | 65.0° |
N | CA | C | HA | 117.5° | 119.9° |
N | CA | C | O | 72.3° | 26.0° |
N | CA | C | OXT | 105.0° | 154.0° |
CA | N | C7 | H1 | 180.0° | 175.4° |
CA | N | C7 | H4 | 60.0° | 64.6° |
CA | N | C7 | H3 | 60.0° | 55.5° |
N | CA | CB | H7 | 55.6° | 55.0° |
N | CA | CB | H8 | 64.0° | 175.0° |
CA | CB | CG | H7 | 120.2° | 120.0° |
CA | CB | CG | H8 | 120.2° | 119.9° |
CB | CA | C | HA | 119.7° | 120.1° |
CB | CA | C | O | 50.5° | 94.0° |
CA | CB | CG | CD | 161.4° | 180.0° |
CB | CA | C | OXT | 132.3° | 86.0° |
CB | CA | N | H | 176.4° | 29.9° |
CA | CB | H7 | H8 | 119.5° | 120.0° |
CA | CB | CG | H9 | 41.6° | 60.0° |
CA | CB | CG | H10 | 78.8° | 60.1° |
CG | CB | CA | C | 63.8° | 175.0° |
CB | CG | CD | OE2 | 37.2° | 0.0° |
CB | CG | CD | H9 | 119.9° | 120.0° |
CB | CG | CD | H10 | 119.8° | 120.0° |
CB | CG | CD | OE1 | 137.8° | 180.0° |
CG | CB | CA | HA | 55.9° | 55.0° |
CG | CB | H7 | H8 | 119.5° | 120.0° |
CB | CG | H9 | H10 | 120.5° | 120.1° |
CA | C | O | OXT | 176.8° | 180.0° |
C | CA | N | H | 52.9° | 149.9° |
C | CA | CB | H7 | 176.0° | 65.0° |
C | CA | CB | H8 | 56.4° | 55.0° |
CA | C | OXT | HXT | 177.2° | 180.0° |
OE2 | CD | CG | OE1 | 175.0° | 179.9° |
OE2 | CD | CG | H9 | 157.1° | 120.0° |
OE2 | CD | CG | H10 | 82.6° | 120.0° |
OE2 | CD | OE1 | H11 | 0.0° | 0.1° |
O | C | CA | HA | 170.2° | 146.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
CD | CG | CB | H7 | 78.4° | 60.1° |
CD | CG | CB | H8 | 41.2° | 60.0° |
CD | CG | H9 | H10 | 120.5° | 120.0° |
CG | CD | OE1 | H11 | 174.2° | 180.0° |
OE1 | CD | CG | H9 | 17.9° | 60.1° |
OE1 | CD | CG | H10 | 102.4° | 59.9° |
OXT | C | CA | HA | 12.6° | 34.0° |
H1 | C7 | H4 | H3 | 119.9° | 120.0° |
H1 | C7 | N | H | 58.0° | 60.7° |
H4 | C7 | N | H | 62.0° | 59.3° |
H3 | C7 | N | H | 178.0° | 179.3° |
H | N | CA | HA | 64.1° | 90.1° |
HA | CA | CB | H7 | 64.3° | 175.0° |
HA | CA | CB | H8 | 176.1° | 64.9° |
H7 | CB | CG | H9 | 161.7° | NaN° |
H7 | CB | CG | H10 | 41.4° | 59.9° |
H8 | CB | CG | H9 | 78.6° | 59.9° |
H8 | CB | CG | H10 | 161.0° | 180.0° |