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SummaryGeometryRelated PDB entries

EL1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C54S53sing1.81Å1.75Å
BRC38sing1.89Å1.88Å
O59S53doub1.42Å1.43Å
S53O58doub1.42Å1.42Å
S53N51sing1.66Å1.62Å
C38S40sing1.71Å1.73ÅAromatic
C38C36doub1.34Å1.34ÅAromatic
S40C33sing1.76Å1.74ÅAromatic
N51C50sing1.39Å1.42Å
C36C34sing1.37Å1.41ÅAromatic
C48C50doub1.39Å1.39ÅAromatic
C48C46sing1.38Å1.38ÅAromatic
C50C41sing1.40Å1.41ÅAromatic
C33C34doub1.37Å1.38ÅAromatic
C33C31sing1.47Å1.49Å
O32C31doub1.22Å1.23Å
C46C44doub1.38Å1.38ÅAromatic
C31N27sing1.35Å1.35Å
C41C14sing1.48Å1.49Å
C41C42doub1.39Å1.39ÅAromatic
C14C12doub1.40Å1.39ÅAromatic
C14C15sing1.39Å1.39ÅAromatic
C12C10sing1.37Å1.38ÅAromatic
N27C28sing1.47Å1.47Å
N27C24sing1.47Å1.47Å
C44C42sing1.38Å1.38ÅAromatic
C15C17doub1.38Å1.38ÅAromatic
C10C09doub1.40Å1.40ÅAromatic
C28C19sing1.54Å1.54Å
O08C07doub1.22Å1.23Å
C17C09sing1.40Å1.40ÅAromatic
C17O18sing1.36Å1.38Å
C24C21sing1.55Å1.51Å
C09C07sing1.47Å1.50Å
O18C19sing1.43Å1.46Å
C07N05sing1.35Å1.33Å
C19C21sing1.55Å1.51Å
N05C01sing1.47Å1.46Å
C01H1sing1.09Å1.10Å
C01H2sing1.09Å1.10Å
C01H3sing1.09Å1.10Å
N05H4sing0.97Å1.00Å
C10H5sing1.08Å1.08Å
C12H6sing1.08Å1.08Å
C15H7sing1.08Å1.08Å
C19H8sing1.09Å1.10Å
C21H9sing1.09Å1.10Å
C21H10sing1.09Å1.10Å
C24H11sing1.09Å1.10Å
C24H12sing1.09Å1.10Å
C28H13sing1.09Å1.10Å
C28H14sing1.09Å1.10Å
C34H15sing1.08Å1.08Å
C36H16sing1.08Å1.08Å
C42H17sing1.08Å1.08Å
C44H18sing1.08Å1.08Å
C46H19sing1.08Å1.08Å
C48H20sing1.08Å1.08Å
N51H21sing0.97Å1.00Å
C54H22sing1.09Å1.10Å
C54H23sing1.09Å1.10Å
C54H24sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C54S53O59109.0°110.6°
C54S53O58108.4°110.6°
C54S53N51106.6°104.4°
S53C54H22109.5°109.4°
S53C54H23109.5°109.4°
S53C54H24109.5°109.5°
BRC38S40120.5°124.5°
BRC38C36126.4°124.5°
O59S53O58118.9°121.1°
O59S53N51106.2°104.2°
O58S53N51107.1°104.3°
S53N51C50122.8°120.0°
S53N51H21106.0°120.0°
S40C38C36113.1°110.9°
C38S40C3391.0°91.6°
C38C36C34111.9°115.1°
C38C36H16124.0°122.4°
S40C33C34110.2°109.1°
S40C33C31115.8°125.4°
N51C50C48120.1°120.1°
N51C50C41119.6°120.1°
C50N51H21106.1°120.0°
C36C34C33113.7°113.3°
C36C34H15123.1°123.4°
C34C36H16124.0°122.5°
C50C48C46119.8°120.0°
C48C50C41120.3°119.7°
C50C48H20120.1°120.0°
C48C46C44120.3°120.3°
C48C46H19119.9°119.8°
C46C48H20120.1°120.0°
C50C41C14122.5°120.2°
C50C41C42118.5°119.6°
C34C33C31133.8°125.5°
C33C34H15123.2°123.3°
C33C31O32117.7°120.0°
C33C31N27120.1°120.1°
O32C31N27121.2°120.0°
C46C44C42120.4°120.3°
C46C44H18119.8°119.8°
C44C46H19119.9°119.9°
C31N27C28119.2°125.6°
C31N27C24130.3°125.7°
C14C41C42118.8°120.2°
C41C14C12122.2°120.0°
C41C14C15119.3°119.9°
C41C42C44120.7°119.9°
C41C42H17119.7°120.0°
C12C14C15118.4°120.1°
C14C12C10121.0°120.3°
C14C12H6119.5°119.8°
C14C15C17120.9°119.8°
C14C15H7119.6°120.1°
C12C10C09121.2°120.2°
C12C10H5119.4°119.9°
C10C12H6119.5°119.8°
C28N27C24110.4°108.7°
N27C28C19104.6°107.2°
N27C28H13110.7°109.9°
N27C28H14110.7°109.9°
N27C24C21102.8°104.8°
N27C24H11111.1°110.5°
N27C24H12111.1°110.5°
C44C42H17119.6°120.0°
C42C44H18119.8°119.9°
C15C17C09120.9°119.7°
C15C17O18123.8°120.2°
C17C15H7119.5°120.1°
C10C09C17117.6°119.9°
C10C09C07116.7°120.1°
C09C10H5119.4°119.9°
C28C19O18116.0°110.7°
C28C19C21101.5°102.9°
C28C19H8110.6°110.9°
C19C28H13110.7°109.9°
C19C28H14110.7°109.9°
O08C07C09121.3°120.0°
O08C07N05122.1°120.0°
C09C17O18115.2°120.1°
C17C09C07125.7°120.1°
C17O18C19120.2°117.0°
C24C21C19104.0°101.6°
C24C21H9110.8°111.0°
C24C21H10110.8°111.1°
C21C24H11111.1°110.4°
C21C24H12111.1°110.3°
C09C07N05116.6°120.0°
O18C19C21105.2°110.7°
O18C19H8111.8°110.7°
C07N05C01121.8°120.0°
C07N05H4119.1°120.0°
C21C19H8111.0°110.7°
C19C21H9110.8°111.1°
C19C21H10110.8°111.0°
N05C01H1109.5°109.5°
N05C01H2109.5°109.5°
N05C01H3109.5°109.5°
C01N05H4119.1°120.0°
H1C01H2109.5°109.5°
H1C01H3109.5°109.5°
H2C01H3109.4°109.5°
H9C21H10109.4°110.8°
H11C24H12109.5°110.3°
H13C28H14109.5°110.0°
H22C54H23109.5°109.5°
H22C54H24109.4°109.5°
H23C54H24109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C54S53O59O58124.8°131.6°
C54S53O59N51114.5°111.7°
C54S53O58N51114.7°111.7°
C54S53N51C5072.9°59.9°
C54S53N51H2149.0°120.2°
S53C54H22H23120.0°119.9°
S53C54H22H24120.0°120.0°
S53C54H23H24120.0°120.0°
BRC38S40C36179.0°179.7°
BRC38S40C33177.8°180.0°
BRC38C36C34177.4°180.0°
BRC38C36H162.5°0.1°
O59S53O58N51120.2°116.7°
O59S53N51C50171.1°56.2°
O59S53N51H2167.1°123.8°
O59S53C54H22180.0°68.4°
O59S53C54H2360.0°51.6°
O59S53C54H2460.0°171.6°
O58S53N51C5043.1°175.9°
O58S53N51H21164.9°4.1°
O58S53C54H2249.3°68.4°
O58S53C54H2370.7°171.6°
O58S53C54H24169.3°51.6°
S53N51C50H21121.8°180.0°
S53N51C50C4885.8°35.4°
S53N51C50C4193.9°145.1°
N51S53C54H2265.8°180.0°
N51S53C54H23174.2°60.0°
N51S53C54H2454.2°60.0°
S40C38C36C341.5°0.3°
C38S40C33C340.5°0.3°
C38S40C33C31174.5°180.0°
S40C38C36H16178.5°179.8°
C36C38S40C331.2°0.3°
C38C36C34H16180.0°180.0°
C38C36C34C331.1°0.0°
C38C36C34H15178.9°180.0°
S40C33C34C360.2°0.2°
S40C33C34C31173.8°179.7°
S40C33C31O3214.2°174.0°
S40C33C31N27177.0°6.1°
S40C33C34H15179.8°179.7°
N51C50C48C41179.7°179.5°
N51C50C48C46179.4°179.9°
N51C50C41C143.7°0.2°
N51C50C41C42179.5°180.0°
N51C50C48H200.6°0.5°
C36C34C33H15180.0°180.0°
C36C34C33C31174.0°179.9°
C50C48C46H20180.0°179.4°
C50C48C46C441.6°0.3°
C48C50C41C14176.6°179.7°
C48C50C41C420.8°0.5°
C50C48C46H19178.4°179.7°
C48C50N51H2136.0°144.6°
C46C48C50C410.3°0.5°
C48C46C44H19180.0°180.0°
C48C46C44C421.7°0.0°
C48C46C44H18178.2°180.0°
C50C41C14C42175.7°179.8°
C50C41C14C12120.1°50.2°
C50C41C14C1561.0°129.7°
C50C41C42C440.7°0.2°
C50C41C42H17179.3°179.8°
C41C50C48H20179.7°179.9°
C41C50N51H21144.3°34.9°
C34C33C31O32159.4°5.7°
C34C33C31N279.5°174.2°
C33C34C36H16178.9°180.0°
C33C31O32N27168.7°179.9°
C33C31N27C28174.8°5.0°
C33C31N27C249.4°175.0°
C31C33C34H156.0°0.0°
O32C31N27C286.3°175.1°
O32C31N27C24177.9°5.0°
C46C44C42C410.5°0.0°
C46C44C42H18180.0°180.0°
C46C44C42H17179.4°180.0°
C44C46C48H20178.4°179.7°
C31N27C28C24176.6°180.0°
C31N27C28C19178.7°178.9°
C31N27C24C21155.9°155.9°
C31N27C24H1137.0°37.0°
C31N27C24H1285.2°85.3°
C31N27C28H1359.5°61.7°
C31N27C28H1462.0°59.5°
C41C14C12C15178.9°179.9°
C41C14C12C10179.0°179.9°
C14C41C42C44176.6°180.0°
C41C14C15C17177.8°179.8°
C41C14C12H61.0°0.1°
C41C14C15H72.2°0.1°
C14C41C42H173.4°0.0°
C42C41C14C1264.2°130.0°
C42C41C14C15114.7°50.1°
C41C42C44H17180.0°180.0°
C41C42C44H18179.4°180.0°
C14C12C10H6180.0°180.0°
C12C14C15C171.2°0.3°
C14C12C10C090.1°0.0°
C14C12C10H5179.9°180.0°
C12C14C15H7178.8°180.0°
C15C14C12C100.0°0.0°
C14C15C17H7180.0°179.7°
C14C15C17C092.2°0.6°
C14C15C17O18178.2°180.0°
C15C14C12H6180.0°180.0°
C12C10C09H5180.0°180.0°
C12C10C09C170.9°0.3°
C12C10C09C07178.7°180.0°
N27C28C19H13119.2°119.4°
N27C28C19H14119.2°119.4°
C28N27C24C2120.2°24.1°
N27C28C19O1886.0°140.5°
N27C28C19C2127.4°22.2°
N27C28C19H8145.3°96.2°
C28N27C24H11139.1°143.0°
C28N27C24H1298.7°94.7°
N27C28H13H14122.2°121.1°
C24N27C28C194.7°1.0°
N27C24C21H11118.9°118.9°
N27C24C21H12118.9°118.9°
N27C24C21C1937.6°37.0°
N27C24C21H981.5°81.2°
N27C24C21H10156.8°155.1°
N27C24H11H12123.1°122.4°
C24N27C28H13123.9°118.3°
C24N27C28H14114.5°120.4°
C42C44C46H19178.3°179.9°
C15C17C09C102.1°0.6°
C15C17C09O18176.3°179.4°
C15C17C09C07179.7°179.7°
C15C17O18C1929.3°5.6°
C10C09C07O0834.6°180.0°
C10C09C17C07177.6°179.7°
C10C09C17O18178.3°180.0°
C10C09C07N05142.5°0.0°
C09C10C12H6179.8°180.0°
C28C19O18C1777.2°90.1°
C28C19C21C2440.2°35.5°
C28C19O18C21111.3°113.5°
C28C19O18H8128.1°123.3°
C28C19C21H8117.6°118.5°
C28C19C21H978.9°82.6°
C28C19C21H10159.4°153.6°
C19C28H13H14122.3°121.1°
O08C07C09C17147.7°0.3°
O08C07C09N05177.2°179.9°
O08C07N05C012.1°0.0°
O08C07N05H4177.9°180.0°
C09C17O18C19154.6°173.8°
C17C09C07N0535.1°179.7°
C17C09C10H5179.1°179.7°
C09C17C15H7177.7°179.7°
O18C17C09C074.0°0.3°
C17O18C19C21171.5°156.4°
O18C17C15H71.8°0.2°
C17O18C19H850.9°33.2°
C24C21C19O1881.0°153.8°
C24C21C19H9119.1°118.1°
C24C21C19H10119.1°118.1°
C24C21C19H8157.8°83.0°
C24C21H9H10122.5°123.9°
C21C24H11H12123.1°122.1°
C09C07N05C01179.2°180.0°
C09C07N05H40.8°0.0°
C07C09C10H51.3°0.0°
O18C19C21H8121.1°123.2°
O18C19C21H9159.8°35.7°
O18C19C21H1038.1°88.1°
O18C19C28H1333.2°100.1°
O18C19C28H14154.7°21.1°
C07N05C01H4180.0°180.0°
C07N05C01H1180.0°180.0°
C07N05C01H260.0°60.0°
C07N05C01H360.0°60.0°
C19C21H9H10122.6°123.9°
C19C21C24H11156.5°155.9°
C19C21C24H1281.3°81.9°
C21C19C28H13146.7°141.6°
C21C19C28H1491.8°97.2°
N05C01H1H2120.0°120.0°
N05C01H1H3120.0°120.0°
N05C01H2H3120.0°120.0°
H1C01H2H3120.0°120.0°
H1C01N05H40.0°0.0°
H2C01N05H4120.0°120.0°
H3C01N05H4120.0°120.0°
H5C10C12H60.1°0.0°
H8C19C21H938.7°158.9°
H8C19C21H1083.1°35.1°
H8C19C28H1395.5°23.1°
H8C19C28H1426.1°144.4°
H9C21C24H1137.4°37.8°
H9C21C24H12159.6°159.9°
H10C21C24H1184.3°86.0°
H10C21C24H1237.9°36.1°
H15C34C36H161.1°0.0°
H17C42C44H180.6°0.0°
H18C44C46H191.7°0.1°
H19C46C48H201.6°0.3°
H22C54H23H24120.0°120.1°

225946

PDB entries from 2024-10-09

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