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EKW

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OM1MOdoub1.66Å1.70Å
MOOR1sing1.66Å1.81Å
MOS7'sing2.30Å2.37Å
MOS8'sing2.28Å2.47Å
MOOM2sing1.66Å1.79Å
N1C6sing1.37Å1.36Å
N1C1'sing1.50Å1.48Å
N1C2sing1.40Å1.37Å
C2N3sing1.36Å1.35Å
C2O2doub1.24Å1.27Å
N3C4doub1.34Å1.36Å
C4C5sing1.42Å1.36Å
C4N4sing1.33Å1.35Å
C5C6doub1.34Å1.35Å
C1'O4Dsing1.41Å1.34Å
C1'C2Dsing1.54Å1.52Å
C2DC3'sing1.54Å1.51Å
C2DO2'sing1.42Å1.39Å
C3'C4Dsing1.54Å1.53Å
C3'O3'sing1.42Å1.44Å
C4DO4Dsing1.44Å1.44Å
C4DC5'sing1.51Å1.52Å
C5'O5'sing1.45Å1.45Å
O5'PAsing1.59Å1.59Å
PAO2Adoub1.48Å1.47Å
PAO1Asing1.52Å1.49Å
PAO3Asing1.59Å1.58Å
O3APBsing1.59Å1.60Å
PBO3Bsing1.59Å1.56Å
PBO1Bdoub1.48Å1.48Å
PBO2Bsing1.52Å1.52Å
O3BC10sing1.44Å1.41Å
C10C9'sing1.53Å1.50Å
C9'O9'sing1.44Å1.44Å
C9'C8'sing1.52Å1.46Å
C8'S8'sing1.68Å1.77Å
C8'C7'doub1.36Å1.38Å
C7'S7'sing1.68Å1.75Å
C7'C6'sing1.54Å1.48Å
C6'N5'sing1.46Å1.45Å
C6'C7sing1.56Å1.52Å
C7N8'sing1.46Å1.41Å
C7O9'sing1.44Å1.42Å
N5'C4Asing1.39Å1.37Å
C4AC4Bdoub1.41Å1.43Å
C4AC4'sing1.44Å1.41Å
N8'C4Bsing1.36Å1.37Å
C4BN1'sing1.36Å1.33Å
N1'C2'doub1.34Å1.34Å
C2'N2'sing1.33Å1.35Å
C2'N3'sing1.37Å1.36Å
N3'C4'sing1.39Å1.35Å
C4'O4'doub1.23Å1.26Å
OR1H2sing0.87Å0.95Å
OM2H3sing0.87Å0.95Å
C5H4sing0.94Å1.08Å
C6H5sing0.94Å1.08Å
N4H6sing0.88Å1.00Å
N4H7sing0.88Å1.00Å
C1'H8sing0.99Å1.10Å
C2DH9sing0.98Å1.10Å
O2'H10sing0.84Å0.95Å
C3'H11sing0.99Å1.10Å
C4DH12sing0.99Å1.10Å
O3'H13sing0.84Å0.95Å
C5'H14sing0.99Å1.10Å
C5'H15sing0.99Å1.10Å
O1AH16sing0.89Å0.95Å
O2BH17sing0.89Å0.95Å
C10H18sing0.98Å1.10Å
C10H19sing0.98Å1.10Å
C9'H20sing0.99Å1.10Å
C6'H21sing0.99Å1.10Å
C7H22sing0.99Å1.10Å
N8'H23sing0.88Å1.00Å
N2'H24sing0.88Å1.00Å
N2'H25sing0.88Å1.00Å
H1N5'sing0.87Å1.00Å
H26N3'sing0.88Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OM1MOOR1108.2°92.1°
OM1MOS7'104.7°89.4°
OM1MOS8'102.0°89.1°
OM1MOOM2109.1°91.9°
OR1MOS7'80.6°92.5°
OR1MOS8'147.6°175.2°
OR1MOOM298.3°91.1°
MOOR1H2109.5°113.5°
S7'MOS8'80.5°82.9°
S7'MOOM2144.5°176.1°
MOS7'C7'109.5°108.0°
S8'MOOM282.5°93.5°
MOS8'C8'107.0°108.9°
MOOM2H3109.5°112.1°
C6N1C1'117.5°122.2°
C6N1C2121.3°119.6°
N1C6C5119.3°121.8°
N1C6H5120.3°119.0°
C1'N1C2121.0°118.2°
N1C1'O4D110.9°109.3°
N1C1'C2D107.5°113.4°
N1C1'H8108.8°109.4°
N1C2N3119.5°119.0°
N1C2O2122.7°119.8°
N3C2O2117.4°121.1°
C2N3C4118.9°120.9°
N3C4C5121.8°120.9°
N3C4N4118.3°118.0°
C5C4N4119.8°121.1°
C4C5C6119.0°117.8°
C4C5H4120.5°121.3°
C4N4H6120.0°120.0°
C4N4H7120.0°120.6°
C6C5H4120.5°120.9°
C5C6H5120.4°119.2°
O4DC1'C2D110.4°108.6°
C1'O4DC4D109.1°110.4°
O4DC1'H8110.9°107.9°
C1'C2DC3'99.6°102.6°
C1'C2DO2'114.9°109.5°
C2DC1'H8108.3°108.0°
C1'C2DH9108.5°110.0°
C3'C2DO2'114.4°114.4°
C2DC3'C4D103.6°103.2°
C2DC3'O3'108.7°112.0°
C3'C2DH9108.6°109.9°
C2DC3'H11110.7°109.1°
O2'C2DH9110.3°110.1°
C2DO2'H10109.5°110.9°
C4DC3'O3'111.2°111.4°
C3'C4DO4D106.1°104.7°
C3'C4DC5'114.0°116.2°
C4DC3'H11110.5°111.1°
C3'C4DH12109.6°109.2°
O3'C3'H11111.8°109.9°
C3'O3'H13109.5°110.9°
O4DC4DC5'106.4°109.8°
O4DC4DH12110.8°108.8°
C4DC5'O5'110.1°109.6°
C5'C4DH12109.8°107.9°
C4DC5'H14109.3°109.3°
C4DC5'H15109.3°110.1°
C5'O5'PA122.9°123.5°
O5'C5'H14109.3°109.6°
O5'C5'H15109.3°109.9°
O5'PAO2A109.9°114.8°
O5'PAO1A103.5°109.2°
O5'PAO3A105.7°104.5°
O2APAO1A120.9°113.5°
O2APAO3A105.2°108.9°
O1APAO3A110.8°105.1°
PAO1AH16109.5°113.3°
PAO3APB130.2°133.4°
O3APBO3B101.2°104.4°
O3APBO1B110.2°109.2°
O3APBO2B108.9°104.1°
O3BPBO1B110.8°114.8°
O3BPBO2B105.8°109.3°
PBO3BC10122.6°122.2°
O1BPBO2B118.5°114.0°
PBO2BH17109.5°113.9°
O3BC10C9'110.6°112.1°
O3BC10H18109.2°109.7°
O3BC10H19109.2°109.7°
C10C9'O9'106.0°106.4°
C10C9'C8'112.0°114.9°
C9'C10H18109.2°108.9°
C9'C10H19109.2°108.7°
C10C9'H20108.3°107.5°
O9'C9'C8'112.4°112.4°
C9'O9'C7112.0°119.3°
O9'C9'H20109.1°108.8°
C9'C8'S8'118.6°119.2°
C9'C8'C7'122.4°121.6°
C8'C9'H20108.9°106.7°
S8'C8'C7'118.7°119.2°
C8'C7'S7'120.9°120.5°
C8'C7'C6'120.9°122.7°
S7'C7'C6'117.9°116.8°
C7'C6'N5'108.7°111.4°
C7'C6'C7108.9°112.0°
C7'C6'H21109.4°107.2°
N5'C6'C7111.1°111.9°
C6'N5'C4A115.9°122.6°
N5'C6'H21109.8°107.7°
C6'N5'H1107.8°119.5°
C6'C7N8'111.1°113.1°
C6'C7O9'109.7°110.1°
C7C6'H21108.9°106.2°
C6'C7H22108.0°108.8°
N8'C7O9'109.2°108.4°
C7N8'C4B118.9°122.8°
N8'C7H22109.5°107.5°
C7N8'H23107.0°119.0°
O9'C7H22109.3°108.8°
N5'C4AC4B122.1°119.4°
N5'C4AC4'121.4°121.4°
C4AN5'H1107.9°117.8°
C4BC4AC4'116.4°119.1°
C4AC4BN8'118.8°121.0°
C4AC4BN1'124.4°122.4°
C4AC4'N3'115.5°115.0°
C4AC4'O4'122.2°125.3°
N8'C4BN1'116.8°116.5°
C4BN8'H23107.1°118.3°
C4BN1'C2'117.5°118.0°
N1'C2'N2'119.2°119.1°
N1'C2'N3'120.0°122.9°
N2'C2'N3'120.8°117.9°
C2'N2'H24120.0°120.2°
C2'N2'H25120.0°120.6°
C2'N3'C4'125.8°122.5°
C2'N3'H26117.1°119.1°
N3'C4'O4'122.3°119.7°
C4'N3'H26117.1°118.4°
H6N4H7120.0°119.4°
H14C5'H15109.5°108.3°
H18C10H19109.5°107.6°
H24N2'H25120.0°119.2°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OM1MOOR1S7'102.5°89.5°
OM1MOOR1S8'157.6°103.4°
OM1MOOR1OM2113.4°91.9°
OM1MOS7'S8'100.0°89.1°
OM1MOS7'OM2162.3°110.1°
OM1MOS8'OM2108.1°91.8°
OM1MOS8'C8'88.4°92.4°
OM1MOS7'C7'84.3°94.5°
OM1MOOR1H20.0°44.0°
OM1MOOM2H30.0°51.2°
OR1MOS7'S8'153.6°178.8°
OR1MOS7'OM291.2°157.9°
OR1MOS8'OM293.7°164.6°
OR1MOS8'C8'69.9°11.1°
OR1MOS7'C7'169.3°173.5°
OR1MOOM2H3112.6°143.3°
S7'MOS8'OM2148.8°178.6°
S7'MOS8'C8'14.8°2.9°
MOS7'C7'C8'15.0°8.0°
MOS7'C7'C6'159.1°170.0°
S7'MOOR1H2102.5°133.5°
S7'MOOM2H3161.9°58.8°
MOS8'C8'C9'161.6°179.7°
MOS8'C8'C7'11.8°0.8°
S8'MOS7'C7'15.7°5.3°
S8'MOOR1H2157.6°147.4°
S8'MOOM2H3100.1°38.0°
OM2MOS8'C8'163.6°175.7°
OM2MOS7'C7'78.0°15.6°
OM2MOOR1H2113.4°48.0°
C6N1C1'C2174.7°179.5°
C6N1C2N33.0°0.4°
C6N1C2O2169.8°179.7°
N1C6C5C41.1°0.1°
N1C6C5H5180.0°180.0°
C6N1C1'O4D49.9°34.3°
C6N1C1'C2D70.8°87.0°
N1C6C5H4178.8°179.8°
C6N1C1'H8172.1°152.3°
C1'N1C2N3171.4°179.9°
C1'N1C2O215.8°0.2°
C1'N1C6C5170.9°179.8°
N1C1'O4DC2D119.0°124.2°
N1C1'O4DH8121.0°119.0°
N1C1'C2DH8117.4°121.5°
N1C1'C2DC3'153.8°107.0°
N1C1'C2DO2'83.6°131.1°
N1C1'O4DC4D139.4°130.1°
C1'N1C6H59.0°0.2°
N1C1'C2DH940.3°10.0°
N1C2N3O2173.2°179.9°
N1C2N3C40.2°0.2°
C2N1C6C53.7°0.3°
C2N1C1'O4D135.5°146.2°
C2N1C1'C2D103.8°92.5°
C2N1C6H5176.3°179.6°
C2N1C1'H813.2°28.2°
C2N3C4C52.8°0.0°
C2N3C4N4173.8°180.0°
O2C2N3C4173.4°179.9°
N3C4C5N4176.5°180.0°
N3C4C5C62.1°0.1°
N3C4C5H4177.9°180.0°
N3C4N4H60.0°0.0°
N3C4N4H7180.0°180.0°
C4C5C6H4180.0°179.9°
C4C5C6H5178.9°179.9°
C5C4N4H6176.6°180.0°
C5C4N4H73.4°0.1°
N4C4C5C6174.4°180.0°
N4C4C5H45.6°0.0°
C4N4H6H7180.0°180.0°
O4DC1'C2DH8121.6°116.8°
O4DC1'C2DC3'32.8°14.8°
O4DC1'C2DO2'155.4°107.1°
C1'O4DC4DC3'1.0°24.3°
C1'O4DC4DC5'120.7°149.8°
O4DC1'C2DH980.7°131.7°
C1'O4DC4DH12120.0°92.3°
C1'C2DC3'O2'123.0°118.6°
C1'C2DC3'H9113.4°117.0°
C1'C2DO2'H9123.0°121.1°
C1'C2DC3'C4D30.7°28.2°
C1'C2DC3'O3'87.6°148.1°
C2DC1'O4DC4D20.4°5.9°
C1'C2DO2'H10180.0°172.3°
C1'C2DC3'H11149.1°89.9°
C3'C2DO2'H9122.7°124.3°
C2DC3'C4DO3'116.6°120.4°
C2DC3'C4DH11118.6°116.8°
C2DC3'O3'H11122.6°121.5°
C2DC3'C4DO4D21.3°32.5°
C2DC3'C4DC5'95.4°153.9°
C3'C2DC1'H888.8°131.6°
C3'C2DO2'H1065.7°73.1°
C2DC3'C4DH12141.1°83.8°
C2DC3'O3'H13180.0°169.6°
O2'C2DC3'C4D153.7°90.3°
O2'C2DC3'O3'35.4°29.6°
O2'C2DC1'H833.8°9.6°
O2'C2DC3'H1187.9°151.5°
C4DC3'O3'H11124.0°123.5°
C3'C4DO4DC5'121.8°125.5°
C3'C4DO4DH12118.9°116.6°
C3'C4DC5'H12123.4°123.0°
C3'C4DC5'O5'37.1°78.5°
C4DC3'C2DH982.7°145.3°
C4DC3'O3'H1366.5°75.4°
C3'C4DC5'H14157.2°161.3°
C3'C4DC5'H1583.0°42.5°
O3'C3'C4DO4D95.3°152.9°
O3'C3'C4DC5'148.0°85.8°
O3'C3'C2DH9159.0°94.8°
O3'C3'C4DH1224.4°36.5°
O4DC4DC5'H12120.0°118.4°
O4DC4DC5'O5'79.5°162.9°
C4DO4DC1'H899.6°110.9°
O4DC4DC3'H11140.0°84.3°
O4DC4DC5'H1440.6°42.7°
O4DC4DC5'H15160.4°76.1°
C4DC5'O5'H14120.1°120.0°
C4DC5'O5'H15120.1°121.1°
C4DC5'O5'PA165.9°173.7°
C5'C4DC3'H1123.2°37.1°
C4DC5'H14H15119.7°119.9°
C5'O5'PAO2A62.0°173.8°
C5'O5'PAO1A167.5°45.0°
C5'O5'PAO3A51.0°67.0°
O5'C5'C4DH12160.5°44.5°
O5'C5'H14H15119.7°119.9°
O5'PAO2AO1A120.4°126.7°
O5'PAO2AO3A113.4°116.7°
O5'PAO1AO3A112.9°111.7°
O5'PAO3APB62.0°59.2°
PAO5'C5'H1445.8°66.3°
PAO5'C5'H1574.0°52.6°
O5'PAO1AH16123.5°179.6°
O2APAO1AO3A123.7°118.8°
O2APAO3APB178.3°63.9°
O2APAO1AH160.0°50.9°
O1APAO3APB49.4°174.2°
PAO3APBO3B153.0°30.9°
PAO3APBO1B89.8°154.1°
PAO3APBO2B41.8°83.7°
O3APAO1AH16123.6°68.0°
O3APBO3BO1B116.8°119.5°
O3APBO3BO2B113.5°110.9°
O3APBO1BO2B126.3°116.0°
O3APBO3BC1089.2°170.7°
O3APBO2BH17126.9°173.6°
O3BPBO1BO2B122.6°127.2°
PBO3BC10C9'128.0°170.4°
O3BPBO2BH17125.0°75.3°
PBO3BC10H18111.9°49.3°
PBO3BC10H197.8°68.7°
O1BPBO3BC1027.5°69.8°
O1BPBO2BH170.0°54.7°
O2BPBO3BC10157.2°59.7°
O3BC10C9'H18120.2°121.6°
O3BC10C9'H19120.2°121.4°
O3BC10C9'O9'44.8°85.2°
O3BC10C9'C8'167.8°39.8°
O3BC10H18H19119.5°119.3°
O3BC10C9'H2072.2°158.4°
C10C9'O9'C8'122.7°126.5°
C10C9'O9'H20116.4°115.6°
C10C9'C8'H20119.7°119.0°
C10C9'C8'S8'42.1°53.3°
C10C9'C8'C7'131.0°127.2°
C10C9'O9'C7168.0°166.4°
C9'C10H18H19119.5°117.7°
O9'C9'C8'H20121.0°119.1°
O9'C9'C8'S8'161.4°175.2°
O9'C9'C8'C7'11.7°5.4°
C9'O9'C7C6'67.9°57.1°
C9'O9'C7N8'170.1°178.7°
O9'C9'C10H1875.4°36.4°
O9'C9'C10H19165.0°153.4°
C9'O9'C7H2250.3°62.0°
C9'C8'S8'C7'173.4°179.5°
C9'C8'C7'S7'174.8°174.5°
C9'C8'C7'C6'0.8°7.6°
C8'C9'O9'C745.3°39.9°
C8'C9'C10H1847.6°161.4°
C8'C9'C10H1972.1°81.6°
S8'C8'C7'S7'1.7°6.1°
S8'C8'C7'C6'172.3°171.8°
S8'C8'C9'H2077.6°65.7°
C8'C7'S7'C6'174.1°178.0°
C8'C7'C6'N5'100.3°116.6°
C8'C7'C6'C720.8°9.7°
C7'C8'C9'H20109.3°113.7°
C8'C7'C6'H21139.8°125.8°
S7'C7'C6'N5'73.8°65.5°
S7'C7'C6'C7165.1°168.3°
S7'C7'C6'H2146.1°52.2°
C7'C6'N5'C7119.8°126.3°
C7'C6'N5'H21119.7°117.3°
C7'C6'C7H21119.3°116.7°
C7'C6'C7N8'173.9°160.3°
C7'C6'C7O9'53.1°38.9°
C7'C6'N5'C4A161.0°154.4°
C7'C6'C7H2266.0°80.3°
C7'C6'N5'H140.0°25.8°
N5'C6'C7H21121.1°117.3°
N5'C6'C7N8'54.2°34.4°
N5'C6'C7O9'66.6°87.1°
C6'N5'C4AH1121.0°179.8°
C6'N5'C4AC4B14.3°9.3°
C6'N5'C4AC4'170.9°167.4°
N5'C6'C7H22174.4°153.7°
C6'C7N8'O9'121.1°122.4°
C6'C7N8'H22119.3°120.1°
C6'C7O9'H22118.3°119.2°
C7C6'N5'C4A41.2°28.1°
C6'C7N8'C4B40.9°25.7°
C6'C7N8'H2380.5°154.2°
C7C6'N5'H179.8°152.1°
N8'C7O9'H22119.7°116.7°
C7N8'C4BC4A13.6°6.3°
C7N8'C4BH23121.3°179.8°
C7N8'C4BN1'168.0°170.8°
N8'C7C6'H2166.8°83.0°
O9'C7N8'C4B80.3°96.7°
C7O9'C9'H2075.5°78.0°
O9'C7C6'H21172.3°155.6°
O9'C7N8'H23158.4°83.5°
N5'C4AC4BC4'175.0°176.8°
N5'C4AC4BN8'1.4°3.5°
N5'C4AC4BN1'176.9°179.6°
N5'C4AC4'N3'178.7°178.8°
N5'C4AC4'O4'0.5°2.1°
C4AN5'C6'H2179.3°88.3°
C4AC4BN8'N1'178.4°177.1°
C4AC4BN1'C2'6.0°2.1°
C4BC4AC4'N3'3.6°2.1°
C4BC4AC4'O4'175.6°178.8°
C4AC4BN8'H23107.7°173.5°
C4BC4AN5'H1106.7°170.9°
C4'C4AC4BN8'173.7°179.8°
C4'C4AC4BN1'8.0°2.8°
C4AC4'N3'C2'2.2°0.8°
C4AC4'N3'O4'179.2°179.2°
C4'C4AN5'H168.1°12.4°
C4AC4'N3'H26177.8°179.3°
N8'C4BN1'C2'175.6°179.1°
C4BN8'C7H22160.1°145.8°
C4BN1'C2'N2'178.7°179.4°
C4BN1'C2'N3'0.2°0.7°
N1'C4BN8'H2370.7°9.4°
N1'C2'N2'N3'178.5°180.0°
N1'C2'N3'C4'4.5°0.1°
N1'C2'N2'H240.0°0.1°
N1'C2'N2'H25180.0°179.9°
N1'C2'N3'H26175.6°180.0°
N2'C2'N3'C4'177.0°179.9°
C2'N2'H24H25180.0°180.0°
N2'C2'N3'H263.0°0.0°
C2'N3'C4'H26180.0°179.9°
C2'N3'C4'O4'178.6°180.0°
N3'C2'N2'H24178.6°179.9°
N3'C2'N2'H251.4°0.1°
O4'C4'N3'H261.4°0.1°
H4C5C6H51.1°0.2°
H8C1'C2DH9157.7°111.5°
H9C2DO2'H1057.0°51.2°
H9C2DC3'H1135.7°27.1°
H11C3'C4DH12100.3°159.4°
H11C3'O3'H1357.5°48.1°
H12C4DC5'H1479.4°75.7°
H12C4DC5'H1540.4°165.4°
H18C10C9'H20167.7°80.1°
H19C10C9'H2048.0°36.9°
H21C6'C7H2253.3°36.4°
H21C6'N5'H1159.7°91.5°
H22C7N8'H2338.8°34.1°

259015

PDB entries from 2026-09-02

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