Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

EK7

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C8C9sing1.52Å1.52Å
C8C7sing1.50Å1.51Å
C6C7doub1.38Å1.37ÅAromatic
C6N2sing1.33Å1.34ÅAromatic
C9C2sing1.52Å1.51Å
C7C4sing1.40Å1.40ÅAromatic
N2C5doub1.32Å1.34ÅAromatic
N5C19trip1.14Å1.14Å
C2C1doub1.36Å1.36ÅAromatic
C2C3sing1.41Å1.45ÅAromatic
C19C1sing1.43Å1.43Å
C4C3sing1.49Å1.47Å
C4N1doub1.32Å1.35ÅAromatic
C1Ssing1.76Å1.73ÅAromatic
C5N1sing1.33Å1.35ÅAromatic
C5N3sing1.39Å1.36Å
C3C16doub1.37Å1.38ÅAromatic
N3C10sing1.40Å1.41Å
C16Ssing1.70Å1.74ÅAromatic
C16N4sing1.38Å1.36Å
C17N4sing1.47Å1.46Å
N4C18sing1.47Å1.46Å
C10C11doub1.39Å1.39ÅAromatic
C10C15sing1.39Å1.39ÅAromatic
C11C12sing1.39Å1.38ÅAromatic
C15C14doub1.38Å1.39ÅAromatic
C12Osing1.36Å1.37Å
C12C13doub1.39Å1.39ÅAromatic
C14C13sing1.38Å1.39ÅAromatic
C9H4sing1.09Å1.10Å
C9H5sing1.09Å1.10Å
C8H2sing1.09Å1.10Å
C8H3sing1.09Å1.10Å
C18H16sing1.09Å1.10Å
C18H15sing1.09Å1.10Å
C18H17sing1.09Å1.10Å
C17H14sing1.09Å1.10Å
C17H12sing1.09Å1.10Å
C17H13sing1.09Å1.10Å
C6H1sing1.08Å1.08Å
N3H6sing0.97Å1.00Å
C15H11sing1.08Å1.08Å
C14H10sing1.08Å1.08Å
C13H9sing1.08Å1.08Å
OH8sing0.97Å0.95Å
C11H7sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C9C8C7112.7°112.5°
C8C9C2112.1°109.8°
C8C9H4108.8°109.4°
C8C9H5108.8°109.4°
C9C8H2108.7°109.0°
C9C8H3108.7°108.9°
C8C7C6122.7°120.7°
C8C7C4121.6°121.4°
C7C8H2108.7°108.9°
C7C8H3108.7°108.8°
C7C6N2124.5°119.0°
C6C7C4115.6°117.9°
C7C6H1117.7°120.5°
C6N2C5115.9°121.5°
N2C6H1117.7°120.5°
C9C2C1125.2°126.0°
C9C2C3122.0°121.1°
C2C9H4108.8°109.4°
C2C9H5108.8°109.5°
C7C4C3119.2°117.8°
C7C4N1121.1°120.3°
N2C5N1124.5°121.6°
N2C5N3116.0°119.2°
N5C19C1177.8°180.0°
C1C2C3112.8°112.9°
C2C1C19126.9°124.9°
C2C1S112.4°110.3°
C2C3C4118.3°119.5°
C2C3C16111.4°113.7°
C19C1S120.6°124.8°
C3C4N1119.6°121.9°
C4C3C16130.2°126.8°
C4N1C5118.2°119.8°
C1SC1691.3°92.0°
N1C5N3119.5°119.2°
C5N3C10135.5°120.0°
C5N3H6112.2°120.0°
C3C16S112.1°111.1°
C3C16N4131.7°124.5°
N3C10C11117.6°120.1°
N3C10C15122.6°120.0°
C10N3H6112.2°120.0°
SC16N4116.1°124.4°
C16N4C17121.2°111.0°
C16N4C18122.3°111.0°
C17N4C18116.5°111.0°
N4C17H14109.5°109.5°
N4C17H12109.5°109.5°
N4C17H13109.5°109.5°
N4C18H16109.5°109.5°
N4C18H15109.5°109.5°
N4C18H17109.5°109.5°
C11C10C15119.3°119.9°
C10C11C12120.4°119.9°
C10C11H7119.8°120.1°
C10C15C14120.0°120.0°
C10C15H11120.0°120.0°
C11C12O118.3°120.0°
C11C12C13120.3°119.9°
C12C11H7119.8°120.0°
C15C14C13120.7°120.1°
C14C15H11120.0°120.0°
C15C14H10119.7°120.0°
OC12C13121.3°120.0°
C12OH8109.5°114.0°
C12C13C14119.2°120.1°
C12C13H9120.4°120.0°
C13C14H10119.6°119.9°
C14C13H9120.4°119.9°
H4C9H5109.5°109.4°
H2C8H3109.4°108.7°
H16C18H15109.4°109.4°
H16C18H17109.5°109.5°
H15C18H17109.5°109.5°
H14C17H12109.4°109.5°
H14C17H13109.5°109.5°
H12C17H13109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C9C8C7H2120.5°120.9°
C9C8C7H3120.5°120.8°
C9C8C7C6147.1°145.3°
C8C9C2H4120.4°120.1°
C8C9C2H5120.4°120.1°
C9C8C7C436.0°34.9°
C8C9C2C1154.6°147.2°
C8C9C2C326.3°33.9°
C8C9H4H5118.8°119.8°
C9C8H2H3118.5°118.6°
C8C7C6C4177.1°179.8°
C8C7C6N2174.4°178.9°
C7C8C9C242.3°47.9°
C8C7C4C38.8°2.5°
C8C7C4N1174.5°178.3°
C7C8C9H478.1°72.2°
C7C8C9H5162.7°168.0°
C7C8H2H3118.5°118.4°
C8C7C6H15.6°1.0°
C7C6N2H1180.0°180.0°
C7C6N2C50.6°0.1°
C6C7C4C3174.1°177.7°
C6C7C4N12.6°1.6°
C6C7C8H292.4°24.4°
C6C7C8H326.6°94.0°
N2C6C7C42.6°0.9°
C6N2C5N11.7°0.6°
C6N2C5N3176.7°179.4°
C9C2C1C3179.1°179.0°
C9C2C1C192.2°1.7°
C9C2C3C40.5°2.6°
C9C2C1S179.7°178.6°
C9C2C3C16179.1°178.1°
C2C9H4H5118.8°119.9°
C2C9C8H278.2°168.7°
C2C9C8H3162.8°72.8°
C7C4C3C210.2°14.7°
C7C4C3N1176.7°179.2°
C7C4N1C50.6°1.1°
C7C4C3C16171.4°164.5°
C4C7C8H284.4°155.8°
C4C7C8H3156.5°85.8°
C4C7C6H1177.4°179.1°
N2C5N1C41.7°0.1°
N2C5N1N3178.3°180.0°
N2C5N3C10171.1°5.2°
C5N2C6H1179.4°179.8°
N2C5N3H68.9°174.7°
N5C19C1C29.5°62.8°
N5C19C1S167.8°116.8°
C2C1C19S177.3°179.7°
C1C2C3C4178.7°178.4°
C1C2C3C160.0°0.9°
C2C1SC160.8°0.1°
C1C2C9H485.0°92.8°
C1C2C9H534.2°27.1°
C3C2C1C19176.9°179.3°
C2C3C4C16178.4°179.2°
C2C3C4N1166.5°164.6°
C3C2C1S0.6°0.4°
C2C3C16S0.6°1.0°
C2C3C16N4175.2°179.3°
C3C2C9H494.1°86.1°
C3C2C9H5146.7°154.0°
C19C1SC16176.8°179.9°
C3C4N1C5176.0°178.1°
C4C3C16S179.1°178.2°
C4C3C16N43.2°1.4°
C4N1C5N3176.7°179.9°
N1C4C3C1611.9°16.3°
C1SC16C30.8°0.6°
C1SC16N4175.7°179.7°
N1C5N3C1010.4°174.7°
N1C5N3H6169.6°5.3°
C5N3C10H6180.0°180.0°
C5N3C10C11153.4°146.9°
C5N3C10C1518.1°33.4°
C3C16SN4176.6°179.7°
C3C16N4C1784.4°116.0°
C3C16N4C1896.5°120.0°
N3C10C11C15171.8°179.7°
N3C10C11C12169.9°179.8°
N3C10C15C14169.7°179.9°
N3C10C15H1110.3°0.0°
N3C10C11H710.2°0.1°
SC16N4C1799.9°64.4°
SC16N4C1879.2°59.6°
C16N4C17C18179.2°124.0°
C16N4C18H16180.0°60.1°
C16N4C18H1560.0°180.0°
C16N4C18H1760.0°60.0°
C16N4C17H14180.0°56.4°
C16N4C17H1260.0°176.4°
C16N4C17H1360.0°63.7°
C17N4C18H160.9°63.9°
C17N4C18H15120.8°56.0°
C17N4C18H17119.2°176.0°
N4C17H14H12120.0°120.0°
N4C17H14H13120.0°120.0°
N4C17H12H13120.0°120.0°
N4C18H16H15120.0°119.9°
N4C18H16H17120.0°120.1°
N4C18H15H17120.0°120.0°
C18N4C17H140.8°179.7°
C18N4C17H12119.2°59.7°
C18N4C17H13120.8°60.3°
C10C11C12H7180.0°179.7°
C11C10C15C141.7°0.2°
C10C11C12O178.4°179.7°
C10C11C12C130.6°0.5°
C11C10N3H626.6°33.1°
C11C10C15H11178.3°179.7°
C15C10C11C121.9°0.5°
C10C15C14H11180.0°179.9°
C10C15C14C130.1°0.1°
C15C10N3H6161.9°146.6°
C10C15C14H10179.9°180.0°
C15C10C11H7178.0°179.8°
C11C12OC13179.0°179.8°
C11C12C13C141.0°0.2°
C11C12C13H9179.0°179.8°
C11C12OH8180.0°89.8°
C15C14C13C121.3°0.1°
C15C14C13H10180.0°179.9°
C15C14C13H9178.7°179.9°
OC12C13C14180.0°180.0°
OC12C13H90.0°0.0°
OC12C11H71.6°0.0°
C12C13C14H9180.0°179.9°
C12C13C14H10178.8°180.0°
C13C12OH81.0°90.0°
C13C12C11H7179.4°179.8°
C13C14C15H11179.9°180.0°
H4C9C8H2161.4°48.6°
H4C9C8H342.4°167.1°
H5C9C8H242.2°71.2°
H5C9C8H376.8°47.3°
H16C18H15H17120.0°120.0°
H14C17H12H13120.0°120.0°
H11C15C14H100.1°0.1°
H10C14C13H91.3°0.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon