EHG
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N2 | C2 | sing | 1.39Å | 1.43Å | |
| O3' | C3' | sing | 1.43Å | 1.37Å | |
| C2 | N3 | doub | 1.32Å | 1.37Å | Aromatic |
| C2 | N1 | sing | 1.33Å | 1.34Å | Aromatic |
| N3 | C4 | sing | 1.33Å | 1.40Å | Aromatic |
| C1' | O4' | sing | 1.44Å | 1.39Å | |
| C1' | N9 | sing | 1.46Å | 1.42Å | |
| C1' | C2' | sing | 1.55Å | 1.49Å | |
| N1 | C6 | doub | 1.33Å | 1.34Å | Aromatic |
| O4' | C4' | sing | 1.44Å | 1.45Å | |
| C4 | N9 | sing | 1.37Å | 1.41Å | Aromatic |
| C4 | C5 | doub | 1.41Å | 1.37Å | Aromatic |
| C4' | C3' | sing | 1.54Å | 1.46Å | |
| C4' | C5' | sing | 1.53Å | 1.43Å | |
| N9 | C8 | sing | 1.36Å | 1.35Å | Aromatic |
| C3' | C2' | sing | 1.55Å | 1.46Å | |
| C6 | C5 | sing | 1.40Å | 1.44Å | Aromatic |
| C6 | O6 | sing | 1.35Å | 1.38Å | |
| C5 | N7 | sing | 1.36Å | 1.40Å | Aromatic |
| C2X | C1X | sing | 1.53Å | 1.53Å | |
| C2X | OX | sing | 1.43Å | 1.36Å | |
| C1X | O6 | sing | 1.43Å | 1.39Å | |
| C8 | N7 | doub | 1.30Å | 1.37Å | Aromatic |
| O5' | C5' | sing | 1.43Å | 1.40Å | |
| O5' | P | sing | 1.61Å | 1.55Å | |
| OP2 | P | sing | 1.61Å | 1.58Å | |
| P | OP1 | doub | 1.48Å | 1.57Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'' | sing | 1.09Å | 1.10Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C2' | H2'' | sing | 1.09Å | 1.10Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| N2 | H21 | sing | 0.97Å | 1.00Å | |
| N2 | H22 | sing | 0.97Å | 1.00Å | |
| C1X | H1X1 | sing | 1.09Å | 1.10Å | |
| C1X | H1X2 | sing | 1.09Å | 1.10Å | |
| C2X | H2X2 | sing | 1.09Å | 1.10Å | |
| C2X | H2X1 | sing | 1.09Å | 1.10Å | |
| OX | HOX | sing | 0.97Å | 0.95Å | |
| P | OP3 | sing | 1.61Å | 37.88Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N2 | C2 | N3 | 121.1° | 118.9° |
| N2 | C2 | N1 | 118.1° | 118.8° |
| C2 | N2 | H21 | 109.5° | 120.0° |
| C2 | N2 | H22 | 109.5° | 120.1° |
| O3' | C3' | C4' | 108.3° | 110.6° |
| O3' | C3' | C2' | 111.2° | 110.5° |
| O3' | C3' | H3' | 112.1° | 110.6° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| N3 | C2 | N1 | 120.9° | 122.3° |
| C2 | N3 | C4 | 120.3° | 120.5° |
| C2 | N1 | C6 | 121.2° | 121.2° |
| N3 | C4 | N9 | 134.6° | 134.8° |
| N3 | C4 | C5 | 119.3° | 119.1° |
| O4' | C1' | N9 | 106.7° | 110.4° |
| O4' | C1' | C2' | 104.6° | 104.8° |
| C1' | O4' | C4' | 106.9° | 105.3° |
| O4' | C1' | H1' | 110.4° | 110.4° |
| N9 | C1' | C2' | 116.0° | 110.3° |
| C1' | N9 | C4 | 128.3° | 126.3° |
| C1' | N9 | C8 | 122.8° | 126.3° |
| N9 | C1' | H1' | 109.9° | 110.3° |
| C1' | C2' | C3' | 102.1° | 104.1° |
| C1' | C2' | H2' | 111.3° | 110.5° |
| C1' | C2' | H2'' | 111.3° | 110.7° |
| C2' | C1' | H1' | 109.0° | 110.4° |
| N1 | C6 | C5 | 120.1° | 118.6° |
| N1 | C6 | O6 | 121.7° | 120.8° |
| O4' | C4' | C3' | 107.1° | 104.8° |
| O4' | C4' | C5' | 107.0° | 110.4° |
| O4' | C4' | H4' | 110.4° | 110.4° |
| N9 | C4 | C5 | 106.1° | 106.0° |
| C4 | N9 | C8 | 108.9° | 107.4° |
| C4 | C5 | C6 | 118.3° | 118.3° |
| C4 | C5 | N7 | 108.7° | 107.2° |
| C3' | C4' | C5' | 111.5° | 110.4° |
| C4' | C3' | C2' | 103.5° | 104.0° |
| C3' | C4' | H4' | 110.2° | 110.4° |
| C4' | C3' | H3' | 110.7° | 110.5° |
| C4' | C5' | O5' | 114.9° | 109.5° |
| C4' | C5' | H5' | 108.1° | 109.4° |
| C4' | C5' | H5'' | 108.1° | 109.5° |
| C5' | C4' | H4' | 110.6° | 110.3° |
| N9 | C8 | N7 | 109.2° | 110.0° |
| N9 | C8 | H8 | 125.4° | 125.0° |
| C2' | C3' | H3' | 110.7° | 110.5° |
| C3' | C2' | H2' | 111.3° | 110.5° |
| C3' | C2' | H2'' | 111.3° | 110.5° |
| C5 | C6 | O6 | 118.2° | 120.7° |
| C6 | C5 | N7 | 133.0° | 134.5° |
| C6 | O6 | C1X | 120.2° | 117.0° |
| C5 | N7 | C8 | 107.1° | 109.4° |
| C1X | C2X | OX | 118.9° | 109.5° |
| C2X | C1X | O6 | 117.1° | 109.5° |
| C2X | C1X | H1X1 | 107.5° | 109.5° |
| C2X | C1X | H1X2 | 107.5° | 109.5° |
| C1X | C2X | H2X2 | 107.1° | 109.5° |
| C1X | C2X | H2X1 | 107.1° | 109.4° |
| OX | C2X | H2X2 | 107.0° | 109.5° |
| OX | C2X | H2X1 | 107.1° | 109.5° |
| C2X | OX | HOX | 109.5° | 114.0° |
| O6 | C1X | H1X1 | 107.6° | 109.4° |
| O6 | C1X | H1X2 | 107.5° | 109.5° |
| N7 | C8 | H8 | 125.4° | 125.0° |
| C5' | O5' | P | 122.4° | 123.0° |
| O5' | C5' | H5' | 108.1° | 109.4° |
| O5' | C5' | H5'' | 108.1° | 109.5° |
| O5' | P | OP2 | 108.7° | 109.5° |
| O5' | P | OP1 | 112.2° | 109.4° |
| O5' | P | OP3 | 128.2° | 109.5° |
| OP2 | P | OP1 | 114.8° | 109.5° |
| P | OP2 | HOP2 | 109.5° | 114.0° |
| OP2 | P | OP3 | 53.1° | 109.5° |
| OP1 | P | OP3 | 61.8° | 109.5° |
| H5' | C5' | H5'' | 109.5° | 109.5° |
| H2' | C2' | H2'' | 109.4° | 110.5° |
| H21 | N2 | H22 | 109.4° | 119.9° |
| H1X1 | C1X | H1X2 | 109.5° | 109.5° |
| H2X2 | C2X | H2X1 | 109.5° | 109.5° |
| P | OP3 | HOP3 | 90.0° | 114.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N2 | C2 | N3 | N1 | 179.2° | 178.9° |
| N2 | C2 | N3 | C4 | 179.3° | 180.0° |
| N2 | C2 | N1 | C6 | 179.2° | 179.6° |
| C2 | N2 | H21 | H22 | 120.0° | 179.9° |
| O3' | C3' | C2' | C1' | 81.6° | 118.7° |
| O3' | C3' | C4' | O4' | 100.3° | 142.6° |
| O3' | C3' | C4' | C2' | 118.2° | 118.6° |
| O3' | C3' | C4' | H3' | 123.2° | 122.8° |
| O3' | C3' | C4' | C5' | 143.0° | 98.5° |
| O3' | C3' | C2' | H3' | 125.3° | 122.7° |
| O3' | C3' | C4' | H4' | 19.8° | 23.7° |
| O3' | C3' | C2' | H2' | 37.2° | 122.7° |
| O3' | C3' | C2' | H2'' | 159.5° | 0.1° |
| N3 | C2 | N1 | C6 | 0.1° | 0.7° |
| C2 | N3 | C4 | N9 | 179.3° | 179.1° |
| C2 | N3 | C4 | C5 | 0.4° | 0.8° |
| N3 | C2 | N2 | H21 | 0.0° | 0.1° |
| N3 | C2 | N2 | H22 | 120.0° | 180.0° |
| N1 | C2 | N3 | C4 | 0.1° | 1.1° |
| C2 | N1 | C6 | C5 | 0.0° | 0.0° |
| C2 | N1 | C6 | O6 | 178.4° | 180.0° |
| N1 | C2 | N2 | H21 | 179.3° | 179.0° |
| N1 | C2 | N2 | H22 | 60.8° | 1.0° |
| N3 | C4 | N9 | C1' | 1.9° | 0.1° |
| N3 | C4 | N9 | C5 | 179.0° | 179.9° |
| N3 | C4 | N9 | C8 | 180.0° | 179.7° |
| N3 | C4 | C5 | C6 | 0.4° | 0.1° |
| N3 | C4 | C5 | N7 | 179.7° | 179.7° |
| O4' | C1' | N9 | C2' | 116.1° | 115.4° |
| O4' | C1' | N9 | H1' | 119.7° | 122.3° |
| O4' | C1' | C2' | H1' | 118.1° | 118.9° |
| O4' | C1' | N9 | C4 | 160.9° | 156.7° |
| C1' | O4' | C4' | C3' | 7.2° | 40.5° |
| C1' | O4' | C4' | C5' | 126.8° | 159.4° |
| O4' | C1' | N9 | C8 | 16.9° | 23.5° |
| O4' | C1' | C2' | C3' | 40.0° | 23.9° |
| C1' | O4' | C4' | H4' | 112.7° | 78.4° |
| O4' | C1' | C2' | H2' | 158.9° | 94.7° |
| O4' | C1' | C2' | H2'' | 78.8° | 142.7° |
| N9 | C1' | C2' | H1' | 124.6° | 122.2° |
| N9 | C1' | O4' | C4' | 152.6° | 159.3° |
| C1' | N9 | C4 | C8 | 178.1° | 179.8° |
| C1' | N9 | C4 | C5 | 179.0° | 179.8° |
| N9 | C1' | C2' | C3' | 157.4° | 142.8° |
| C1' | N9 | C8 | N7 | 179.2° | 179.9° |
| N9 | C1' | C2' | H2' | 83.8° | 24.2° |
| N9 | C1' | C2' | H2'' | 38.5° | 98.5° |
| C1' | N9 | C8 | H8 | 0.8° | 0.0° |
| C2' | C1' | O4' | C4' | 29.1° | 40.5° |
| C2' | C1' | N9 | C4 | 83.0° | 87.9° |
| C1' | C2' | C3' | C4' | 34.5° | 0.0° |
| C2' | C1' | N9 | C8 | 99.2° | 91.9° |
| C1' | C2' | C3' | H2' | 118.8° | 118.6° |
| C1' | C2' | C3' | H2'' | 118.8° | 118.8° |
| C1' | C2' | C3' | H3' | 153.1° | 118.6° |
| C1' | C2' | H2' | H2'' | 123.4° | 122.8° |
| N1 | C6 | C5 | C4 | 0.2° | 0.3° |
| N1 | C6 | C5 | O6 | 178.4° | 180.0° |
| N1 | C6 | C5 | N7 | 180.0° | 180.0° |
| N1 | C6 | O6 | C1X | 7.8° | 0.0° |
| O4' | C4' | C3' | C5' | 116.7° | 118.9° |
| O4' | C4' | C3' | H4' | 120.0° | 118.9° |
| O4' | C4' | C5' | H4' | 120.3° | 122.3° |
| O4' | C4' | C3' | C2' | 17.9° | 24.0° |
| O4' | C4' | C5' | O5' | 59.3° | 69.6° |
| O4' | C4' | C5' | H5' | 180.0° | 50.4° |
| O4' | C4' | C5' | H5'' | 61.6° | 170.4° |
| O4' | C4' | C3' | H3' | 136.5° | 94.6° |
| C4' | O4' | C1' | H1' | 88.0° | 78.4° |
| N9 | C4 | C5 | C6 | 179.6° | 179.8° |
| N9 | C4 | C5 | N7 | 0.5° | 0.4° |
| C4 | N9 | C8 | N7 | 1.0° | 0.2° |
| C4 | N9 | C1' | H1' | 41.2° | 34.4° |
| C4 | N9 | C8 | H8 | 179.0° | 179.8° |
| C5 | C4 | N9 | C8 | 0.9° | 0.4° |
| C4 | C5 | C6 | N7 | 179.8° | 179.7° |
| C4 | C5 | C6 | O6 | 178.7° | 179.7° |
| C4 | C5 | N7 | C8 | 0.1° | 0.2° |
| C3' | C4' | C5' | H4' | 123.0° | 122.2° |
| C4' | C3' | C2' | H3' | 118.6° | 118.6° |
| C3' | C4' | C5' | O5' | 176.0° | 175.0° |
| C3' | C4' | C5' | H5' | 63.2° | 65.1° |
| C3' | C4' | C5' | H5'' | 55.2° | 55.0° |
| C4' | C3' | O3' | HO3' | 180.0° | 180.0° |
| C4' | C3' | C2' | H2' | 153.3° | 118.6° |
| C4' | C3' | C2' | H2'' | 84.3° | 118.8° |
| C5' | C4' | C3' | C2' | 98.8° | 142.9° |
| C4' | C5' | O5' | H5' | 120.8° | 119.9° |
| C4' | C5' | O5' | H5'' | 120.8° | 120.0° |
| C4' | C5' | O5' | P | 119.2° | 180.0° |
| C4' | C5' | H5' | H5'' | 117.5° | 120.0° |
| C5' | C4' | C3' | H3' | 19.8° | 24.3° |
| N9 | C8 | N7 | C5 | 0.7° | 0.0° |
| N9 | C8 | N7 | H8 | 180.0° | 180.0° |
| C8 | N9 | C1' | H1' | 136.6° | 145.8° |
| C2' | C3' | C4' | H4' | 138.0° | 95.0° |
| C2' | C3' | O3' | HO3' | 66.9° | 65.3° |
| C3' | C2' | H2' | H2'' | 123.4° | 122.6° |
| C3' | C2' | C1' | H1' | 78.0° | 95.0° |
| C5 | C6 | O6 | C1X | 173.8° | 180.0° |
| C6 | C5 | N7 | C8 | 179.8° | 180.0° |
| O6 | C6 | C5 | N7 | 1.5° | 0.0° |
| C6 | O6 | C1X | C2X | 144.5° | 180.0° |
| C6 | O6 | C1X | H1X1 | 23.4° | 60.0° |
| C6 | O6 | C1X | H1X2 | 94.4° | 60.0° |
| C5 | N7 | C8 | H8 | 179.4° | 180.0° |
| C1X | C2X | OX | H2X2 | 121.3° | 120.0° |
| C1X | C2X | OX | H2X1 | 121.4° | 120.0° |
| C2X | C1X | O6 | H1X1 | 121.1° | 120.0° |
| C2X | C1X | O6 | H1X2 | 121.1° | 120.0° |
| C2X | C1X | H1X1 | H1X2 | 116.5° | 120.0° |
| C1X | C2X | H2X2 | H2X1 | 115.8° | 120.0° |
| C1X | C2X | OX | HOX | 180.0° | 180.0° |
| OX | C2X | C1X | O6 | 56.3° | 64.9° |
| OX | C2X | C1X | H1X1 | 177.4° | 55.0° |
| OX | C2X | C1X | H1X2 | 64.8° | 175.0° |
| OX | C2X | H2X2 | H2X1 | 115.7° | 120.0° |
| O6 | C1X | H1X1 | H1X2 | 116.6° | 120.0° |
| O6 | C1X | C2X | H2X2 | 177.6° | 175.0° |
| O6 | C1X | C2X | H2X1 | 65.0° | 55.0° |
| C5' | O5' | P | OP2 | 163.1° | 64.9° |
| C5' | O5' | P | OP1 | 35.0° | 55.0° |
| O5' | C5' | H5' | H5'' | 117.5° | 120.0° |
| O5' | C5' | C4' | H4' | 61.0° | 52.8° |
| C5' | O5' | P | OP3 | 105.8° | 175.0° |
| O5' | P | OP2 | OP1 | 126.5° | 120.0° |
| O5' | P | OP2 | OP3 | 124.2° | 120.0° |
| O5' | P | OP1 | OP3 | 122.6° | 120.0° |
| O5' | P | OP2 | HOP2 | 126.5° | 60.0° |
| P | O5' | C5' | H5' | 120.0° | 60.1° |
| P | O5' | C5' | H5'' | 1.5° | 60.0° |
| O5' | P | OP3 | HOP3 | 90.0° | 180.0° |
| OP2 | P | OP1 | OP3 | 2.1° | 120.0° |
| OP2 | P | OP3 | HOP3 | 90.0° | 59.9° |
| OP1 | P | OP2 | HOP2 | 0.0° | 180.0° |
| OP1 | P | OP3 | HOP3 | 90.0° | 60.1° |
| HOP2 | OP2 | P | OP3 | 2.3° | 60.0° |
| H5' | C5' | C4' | H4' | 59.8° | 172.7° |
| H5'' | C5' | C4' | H4' | 178.2° | 67.2° |
| H4' | C4' | C3' | H3' | 103.5° | 146.4° |
| H3' | C3' | O3' | HO3' | 57.6° | 57.3° |
| H3' | C3' | C2' | H2' | 88.1° | 0.0° |
| H3' | C3' | C2' | H2'' | 34.2° | 122.6° |
| H2' | C2' | C1' | H1' | 40.8° | 146.4° |
| H2'' | C2' | C1' | H1' | 163.2° | 23.8° |
| H1X1 | C1X | C2X | H2X2 | 61.2° | 65.0° |
| H1X1 | C1X | C2X | H2X1 | 56.1° | 175.0° |
| H1X2 | C1X | C2X | H2X2 | 56.5° | 55.0° |
| H1X2 | C1X | C2X | H2X1 | 173.9° | 65.0° |
| H2X2 | C2X | OX | HOX | 58.6° | 60.0° |
| H2X1 | C2X | OX | HOX | 58.7° | 60.0° |
