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Summary Geometry Related PDB entries

Obsolete: EGL

EGL was replaced with EDO on

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	O1	sing	1.43Å	1.42Å
C1	C2	sing	1.53Å	1.53Å
C1	H11	sing	1.09Å	1.11Å
C1	H12	sing	1.09Å	1.11Å
O1	HO1	sing	0.97Å	0.95Å
C2	O2	sing	1.43Å	1.43Å
C2	H21	sing	1.09Å	1.12Å
C2	H22	sing	1.09Å	1.12Å
O2	HO2	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1	C1	C2	111.4°	109.5°
O1	C1	H11	111.5°	109.4°
O1	C1	H12	111.5°	109.5°
C1	O1	HO1	111.5°	106.9°
C2	C1	H11	111.5°	109.5°
C2	C1	H12	111.5°	109.5°
C1	C2	O2	112.2°	109.5°
C1	C2	H21	111.2°	109.5°
C1	C2	H22	111.2°	109.5°
H11	C1	H12	98.9°	109.4°
O2	C2	H21	111.2°	109.5°
O2	C2	H22	111.3°	109.4°
C2	O2	HO2	112.1°	106.9°
H21	C2	H22	99.1°	109.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1	C1	C2	H11	125.2°	120.0°
O1	C1	C2	H12	125.3°	120.1°
O1	C1	H11	H12	117.3°	119.9°
O1	C1	C2	O2	172.7°	60.0°
O1	C1	C2	H21	47.4°	180.0°
O1	C1	C2	H22	62.0°	60.0°
C2	C1	H11	H12	117.4°	120.0°
C2	C1	O1	HO1	180.0°	180.0°
C1	C2	O2	H21	125.2°	120.1°
C1	C2	O2	H22	125.2°	120.0°
C1	C2	H21	H22	117.0°	120.0°
C1	C2	O2	HO2	180.0°	180.0°
H11	C1	O1	HO1	54.7°	60.0°
H11	C1	C2	O2	62.1°	60.0°
H11	C1	C2	H21	172.7°	60.1°
H11	C1	C2	H22	63.2°	180.0°
H12	C1	O1	HO1	54.7°	59.9°
H12	C1	C2	O2	47.4°	180.0°
H12	C1	C2	H21	77.8°	59.9°
H12	C1	C2	H22	172.7°	60.1°
O2	C2	H21	H22	117.2°	119.9°
H21	C2	O2	HO2	54.8°	59.9°
H22	C2	O2	HO2	54.7°	60.0°

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PDB entries from 2025-12-31

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