EGD
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
CG | CD | sing | 1.53Å | 1.53Å | |
CG | HG1 | sing | 1.09Å | 1.10Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
CG | HG3 | sing | 1.09Å | 1.10Å | |
CD | NE | sing | 1.46Å | 1.47Å | |
CD | HD1 | sing | 1.09Å | 1.10Å | |
CD | HD2 | sing | 1.09Å | 1.10Å | |
NE | CZ | sing | 1.38Å | 1.34Å | |
NE | HNE | sing | 0.97Å | 1.00Å | |
CZ | NH1 | doub | 1.30Å | 1.33Å | |
CZ | NH2 | sing | 1.38Å | 1.33Å | |
NH1 | HH1 | sing | 0.97Å | 1.00Å | |
NH2 | HH21 | sing | 0.97Å | 1.00Å | |
NH2 | HH22 | sing | 0.97Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CD | CG | HG1 | 109.4° | 109.5° |
CD | CG | HG2 | 109.5° | 109.5° |
CD | CG | HG3 | 109.5° | 109.5° |
CG | CD | NE | 111.7° | 109.5° |
CG | CD | HD1 | 108.2° | 109.5° |
CG | CD | HD2 | 108.7° | 109.5° |
HG1 | CG | HG2 | 109.5° | 109.5° |
HG1 | CG | HG3 | 109.4° | 109.5° |
HG2 | CG | HG3 | 109.4° | 109.5° |
NE | CD | HD1 | 108.2° | 109.5° |
NE | CD | HD2 | 108.7° | 109.5° |
CD | NE | CZ | 125.6° | 120.0° |
CD | NE | HNE | 117.2° | 120.0° |
HD1 | CD | HD2 | 111.3° | 109.5° |
CZ | NE | HNE | 117.2° | 120.0° |
NE | CZ | NH1 | 121.0° | 120.0° |
NE | CZ | NH2 | 120.2° | 120.0° |
NH1 | CZ | NH2 | 118.8° | 120.0° |
CZ | NH1 | HH1 | 110.6° | 120.0° |
CZ | NH2 | HH21 | 124.7° | 120.0° |
CZ | NH2 | HH22 | 110.6° | 120.0° |
HH21 | NH2 | HH22 | 124.7° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CD | CG | HG1 | HG2 | 120.0° | 120.0° |
CD | CG | HG1 | HG3 | 120.0° | 120.0° |
CD | CG | HG2 | HG3 | 120.0° | 120.0° |
CG | CD | NE | HD1 | 119.0° | 120.0° |
CG | CD | NE | HD2 | 120.0° | 120.0° |
CG | CD | HD1 | HD2 | 119.4° | 120.0° |
CG | CD | NE | CZ | 126.1° | 180.0° |
CG | CD | NE | HNE | 53.9° | 0.0° |
HG1 | CG | HG2 | HG3 | 120.0° | 120.0° |
HG1 | CG | CD | NE | 73.8° | 180.0° |
HG1 | CG | CD | HD1 | 45.2° | 60.0° |
HG1 | CG | CD | HD2 | 166.2° | 60.0° |
HG2 | CG | CD | NE | 46.2° | 60.0° |
HG2 | CG | CD | HD1 | 165.2° | 60.0° |
HG2 | CG | CD | HD2 | 73.8° | NaN° |
HG3 | CG | CD | NE | 166.2° | 60.0° |
HG3 | CG | CD | HD1 | 74.8° | NaN° |
HG3 | CG | CD | HD2 | 46.2° | 60.0° |
NE | CD | HD1 | HD2 | 119.4° | 120.0° |
CD | NE | CZ | HNE | 180.0° | 180.0° |
CD | NE | CZ | NH1 | 0.1° | 0.0° |
CD | NE | CZ | NH2 | 179.8° | 180.0° |
HD1 | CD | NE | CZ | 7.1° | 60.0° |
HD1 | CD | NE | HNE | 172.9° | 120.0° |
HD2 | CD | NE | CZ | 113.9° | 60.0° |
HD2 | CD | NE | HNE | 66.1° | 120.0° |
NE | CZ | NH1 | NH2 | 179.9° | 180.0° |
NE | CZ | NH1 | HH1 | 180.0° | 180.0° |
NE | CZ | NH2 | HH21 | 179.9° | 0.0° |
NE | CZ | NH2 | HH22 | 0.0° | 180.0° |
HNE | NE | CZ | NH1 | 179.9° | 180.0° |
HNE | NE | CZ | NH2 | 0.2° | 0.0° |
NH1 | CZ | NH2 | HH21 | 0.0° | 180.0° |
NH1 | CZ | NH2 | HH22 | 179.9° | 0.0° |
NH2 | CZ | NH1 | HH1 | 0.1° | 0.0° |
CZ | NH2 | HH21 | HH22 | 180.0° | 180.0° |