Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

EE1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O42P39doub1.48Å1.52Å
O26P25doub1.48Å1.51Å
P39O40sing1.61Å1.51Å
P39O38sing1.61Å1.65Å
P39O41sing1.61Å1.50Å
O38C37sing1.43Å1.46Å
C34C33sing1.53Å1.41Å
C34O35sing1.44Å1.54Å
C34C43sing1.54Å1.57Å
O27P25sing1.61Å1.51Å
O44C43sing1.43Å1.48Å
P25O28sing1.61Å1.63Å
P25O24sing1.61Å1.64Å
C33O32sing1.43Å1.42Å
O35C36sing1.44Å1.29Å
O28P29sing1.61Å1.64Å
C43C37sing1.55Å1.29Å
C37C36sing1.55Å1.66Å
O24C23sing1.43Å1.41Å
C36N45sing1.47Å1.44Å
O32P29sing1.61Å1.66Å
O16C15doub1.21Å1.19Å
C23C22sing1.53Å1.52Å
P29O31doub1.48Å1.50Å
P29O30sing1.61Å1.50Å
C55C57sing1.55Å1.53Å
C55O56sing1.43Å1.50Å
C55C22sing1.54Å1.32Å
C57O58sing1.43Å1.38Å
C57C20sing1.55Å1.54Å
C15C17sing1.49Å1.52Å
C15C10sing1.51Å1.52Å
N45C46sing1.36Å1.33ÅAromatic
N45C54sing1.37Å1.35ÅAromatic
C11C10sing1.53Å1.53Å
C11C12sing1.51Å1.53Å
C22O21sing1.44Å1.62Å
C07C08doub1.31Å1.51Å
C07N06sing1.39Å1.47Å
C08C09sing1.50Å1.49Å
O19C17doub1.21Å1.26Å
C17O18sing1.35Å1.25Å
C46N47doub1.30Å1.33ÅAromatic
C10C09sing1.53Å1.55Å
O14C12doub1.21Å1.26Å
N53C54doub1.33Å1.35ÅAromatic
N53C52sing1.32Å1.33ÅAromatic
C12O13sing1.34Å1.25Å
O21C20sing1.44Å1.31Å
C20N06sing1.46Å1.47Å
C54C48sing1.40Å1.37ÅAromatic
N06C05sing1.37Å1.47Å
C09C04sing1.50Å1.49Å
C52N51doub1.32Å1.33ÅAromatic
N47C48sing1.35Å1.34ÅAromatic
C48C49doub1.41Å1.41ÅAromatic
C05C04doub1.35Å1.52Å
C04C02sing1.41Å1.51Å
N51C49sing1.33Å1.33ÅAromatic
C49N50sing1.38Å1.44Å
C02O03doub1.22Å1.20Å
C02N01sing1.35Å1.41Å
C10H1sing1.09Å1.10Å
C20H2sing1.09Å1.10Å
C22H3sing1.09Å1.10Å
C05H5sing1.08Å1.08Å
C07H7sing1.08Å1.08Å
C08H9sing1.08Å1.08Å
C09H11sing1.09Å1.10Å
C11H12sing1.09Å1.10Å
C11H13sing1.09Å1.10Å
C23H14sing1.09Å1.10Å
C23H15sing1.09Å1.10Å
C33H16sing1.09Å1.10Å
C33H17sing1.09Å1.10Å
C34H18sing1.09Å1.10Å
C36H19sing1.09Å1.10Å
C37H20sing1.09Å1.10Å
C43H21sing1.09Å1.10Å
C46H22sing1.08Å1.08Å
C52H23sing1.08Å1.08Å
C55H24sing1.09Å1.10Å
C57H25sing1.09Å1.10Å
N01H26sing0.97Å1.00Å
N01H27sing0.97Å1.00Å
N50H29sing0.97Å1.00Å
N50H30sing0.97Å1.00Å
O13H31sing0.97Å0.95Å
O18H32sing0.97Å0.95Å
O27H33sing0.97Å0.95Å
O30H34sing0.97Å0.95Å
O40H35sing0.97Å0.95Å
O41H36sing0.97Å0.95Å
O44H37sing0.97Å0.95Å
O56H38sing0.97Å0.95Å
O58H39sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O42P39O40110.7°109.5°
O42P39O38105.1°109.5°
O42P39O41112.2°109.4°
O26P25O27113.8°109.4°
O26P25O28103.7°109.5°
O26P25O24108.5°109.5°
O40P39O38107.3°109.4°
O40P39O41109.2°109.5°
P39O40H35109.5°114.0°
O38P39O41112.2°109.5°
P39O38C37121.1°123.0°
P39O41H36109.5°114.0°
O38C37C43116.2°110.9°
O38C37C36100.3°110.9°
O38C37H20112.2°110.8°
C33C34O35112.0°109.9°
C33C34C43115.7°109.8°
C34C33O32114.2°109.5°
C34C33H16108.3°109.5°
C34C33H17108.3°109.5°
C33C34H18110.8°109.9°
O35C34C4399.9°107.3°
C34O35C36109.5°107.0°
O35C34H18109.0°109.9°
C34C43O44109.9°110.4°
C34C43C37104.6°104.2°
C43C34H18108.7°110.0°
C34C43H21107.6°110.5°
O27P25O28112.4°109.5°
O27P25O24109.9°109.5°
P25O27H33109.5°114.0°
O44C43C37114.3°110.5°
O44C43H21108.6°110.5°
C43O44H37109.5°114.1°
O28P25O24108.3°109.5°
P25O28P29130.2°134.0°
P25O24C23118.6°123.0°
C33O32P29118.2°123.0°
O32C33H16108.3°109.5°
O32C33H17108.2°109.4°
O35C36C37105.6°103.5°
O35C36N45111.6°110.6°
O35C36H19111.6°110.7°
O28P29O32107.1°109.5°
O28P29O31103.6°109.5°
O28P29O30112.4°109.5°
C43C37C36101.5°102.1°
C43C37H20115.2°110.9°
C37C43H21111.6°110.5°
C37C36N45111.8°110.6°
C37C36H19106.6°110.7°
C36C37H20109.4°111.0°
O24C23C22105.9°109.5°
O24C23H14110.4°109.4°
O24C23H15110.4°109.5°
C36N45C46125.7°126.3°
C36N45C54126.1°126.3°
N45C36H19109.3°110.5°
O32P29O31109.7°109.4°
O32P29O30109.6°109.5°
O16C15C17119.3°120.0°
O16C15C10120.4°120.0°
C23C22C55112.6°110.1°
C23C22O21107.3°109.9°
C23C22H3109.2°109.8°
C22C23H14110.3°109.5°
C22C23H15110.4°109.5°
O31P29O30114.2°109.4°
P29O30H34109.5°114.0°
C57C55O56104.3°110.4°
C57C55C22107.1°104.2°
C55C57O58114.4°110.9°
C55C57C20100.7°102.1°
C57C55H24110.5°110.4°
C55C57H25109.6°110.9°
O56C55C22109.8°110.5°
O56C55H24110.9°110.5°
C55O56H38109.5°114.0°
C55C22O21107.5°107.3°
C55C22H3112.1°109.8°
C22C55H24113.8°110.7°
O58C57C20110.1°110.9°
O58C57H25111.8°110.8°
C57O58H39109.5°114.0°
C57C20O21105.4°103.6°
C57C20N06103.8°110.6°
C57C20H2108.8°110.6°
C20C57H25109.5°110.9°
C17C15C10120.2°120.0°
C15C17O19119.7°120.0°
C15C17O18118.6°120.0°
C15C10C11108.2°109.5°
C15C10C09108.1°109.4°
C15C10H1108.7°109.5°
C46N45C54108.1°107.4°
N45C46N47109.2°109.9°
N45C46H22125.4°125.0°
N45C54N53132.6°134.9°
N45C54C48107.4°106.0°
C10C11C12114.7°109.5°
C11C10C09114.7°109.5°
C11C10H1108.6°109.5°
C10C11H12108.1°109.5°
C10C11H13108.2°109.5°
C11C12O14120.1°120.0°
C11C12O13119.8°120.0°
C12C11H12108.1°109.5°
C12C11H13108.1°109.4°
C22O21C20103.2°107.0°
O21C22H3108.0°109.9°
C08C07N06114.6°121.0°
C07C08C09120.6°121.8°
C08C07H7122.7°119.5°
C07C08H9119.7°119.1°
C07N06C20116.3°120.0°
C07N06C05113.0°120.0°
N06C07H7122.7°119.5°
C08C09C10111.9°109.2°
C08C09C04112.6°110.9°
C09C08H9119.7°119.1°
C08C09H11107.8°109.1°
O19C17O18121.6°120.0°
C17O18H32109.5°117.0°
C46N47C48108.6°109.4°
N47C46H22125.4°125.0°
C10C09C04109.5°109.2°
C09C10H1108.4°109.5°
C10C09H11107.0°109.2°
O14C12O13120.1°120.0°
C54N53C52119.9°120.6°
N53C54C48120.0°119.1°
N53C52N51122.2°122.5°
N53C52H23118.9°118.8°
C12O13H31109.5°117.0°
O21C20N06116.2°110.6°
O21C20H2112.2°110.6°
C20N06C05112.9°120.0°
N06C20H2109.7°110.6°
C54C48N47106.7°107.2°
C54C48C49118.0°118.1°
N06C05C04114.8°120.5°
N06C05H5122.5°119.8°
C09C04C05120.5°121.3°
C09C04C02121.5°119.4°
C04C09H11107.7°109.2°
C52N51C49120.2°121.2°
N51C52H23118.9°118.8°
N47C48C49135.3°134.7°
C48C49N51119.7°118.5°
C48C49N50120.4°120.8°
C05C04C02117.9°119.3°
C04C05H5122.6°119.8°
C04C02O03124.6°120.0°
C04C02N01114.2°120.0°
N51C49N50119.9°120.7°
C49N50H29109.5°119.9°
C49N50H30109.5°120.0°
O03C02N01121.2°120.0°
C02N01H26120.0°120.0°
C02N01H27120.0°120.0°
H12C11H13109.5°109.5°
H14C23H15109.5°109.5°
H16C33H17109.5°109.4°
H26N01H27120.0°120.0°
H29N50H30109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O42P39O40O38114.2°120.0°
O42P39O40O41124.1°120.0°
O42P39O38O41122.2°120.0°
O42P39O38C37163.4°55.0°
O42P39O40H350.0°179.9°
O42P39O41H360.0°60.1°
O26P25O27O28117.4°120.0°
O26P25O27O24121.9°120.0°
O26P25O28O24115.1°120.0°
O26P25O28P29159.0°40.0°
O26P25O24C23146.7°54.9°
O26P25O27H330.0°179.9°
O40P39O38O41119.9°120.0°
O40P39O38C3745.5°65.0°
O40P39O41H36123.1°59.9°
P39O38C37C4399.0°127.3°
P39O38C37C36152.6°120.0°
P39O38C37H2036.6°3.7°
O38P39O40H35114.2°60.1°
O38P39O41H36118.1°179.9°
O41P39O38C3774.4°174.9°
O41P39O40H35124.1°59.9°
O38C37C43C3465.2°139.1°
O38C37C43O4455.0°20.5°
O38C37C36O3586.0°155.2°
O38C37C43C36107.7°118.2°
O38C37C43H20134.3°123.5°
O38C37C36H20118.1°123.6°
O38C37C36N45152.3°86.3°
O38C37C36H1932.8°36.6°
O38C37C43H21178.7°102.2°
C33C34O35C43123.1°119.4°
C33C34O35H18123.0°121.0°
C33C34C43H18125.4°121.1°
C33C34C43O4477.4°119.9°
C34C33O32H16120.7°120.1°
C34C33O32H17120.7°120.0°
C33C34O35C36138.8°145.9°
C33C34C43C37159.5°121.5°
C34C33O32P29143.5°180.0°
C34C33H16H17117.9°120.0°
C33C34C43H2140.8°2.8°
O35C34C43H18114.1°119.5°
O35C34C43O44162.2°120.7°
O35C34C33O3275.3°66.4°
O35C34C43C3739.1°2.1°
C34O35C36C377.5°40.1°
C34O35C36N45114.3°158.6°
O35C34C33H1645.3°173.5°
O35C34C33H17164.0°53.5°
C34O35C36H19123.0°78.5°
O35C34C43H2179.7°116.6°
C34C43O44C37117.2°114.7°
C34C43O44H21117.5°122.6°
C43C34C33O3238.3°175.8°
C43C34O35C3615.7°26.6°
C34C43C37H21116.1°118.7°
C34C43C37C3642.4°20.9°
C43C34C33H16159.0°55.7°
C43C34C33H1782.4°64.3°
C34C43C37H20160.5°97.4°
C34C43O44H37180.0°61.5°
O27P25O28O24121.6°120.0°
O27P25O28P2935.7°80.0°
O27P25O24C2321.7°65.0°
O44C43C37H21123.7°122.7°
O44C43C37C36162.7°97.7°
O44C43C34H1848.1°1.2°
O44C43C37H2079.3°144.0°
O28P25O24C23101.4°175.0°
P25O28P29O3270.8°160.0°
P25O28P29O31173.2°40.0°
P25O28P29O3049.5°80.0°
O28P25O27H33117.5°60.1°
O24P25O28P2985.9°160.0°
P25O24C23C22166.5°180.0°
P25O24C23H1474.1°60.0°
P25O24C23H1547.1°60.0°
O24P25O27H33121.9°59.9°
C33O32P29O2845.3°175.0°
C33O32P29O3166.5°55.0°
C33O32P29O30167.5°64.9°
O32C33H16H17117.8°119.9°
O32C33C34H18162.6°54.6°
O35C36C37C4333.7°37.0°
O35C36C37N45121.7°118.5°
O35C36C37H19118.9°118.7°
O35C36N45H19124.0°123.0°
O35C36N45C4615.9°21.3°
O35C36N45C54161.7°158.7°
C36O35C34H1898.2°93.1°
O35C36C37H20155.9°81.2°
O28P29O32O31111.8°120.0°
O28P29O32O30122.1°120.0°
O28P29O31O30122.5°120.0°
O28P29O30H34117.6°60.0°
C43C37C36H20122.2°118.2°
C43C37C36N4588.0°155.5°
C37C43C34H1875.0°117.5°
C43C37C36H19152.6°81.6°
C37C43O44H3762.8°176.2°
C37C36N45H19117.9°122.9°
C37C36N45C46102.2°92.8°
C37C36N45C5480.1°87.3°
C36C37C43H2173.6°139.6°
O24C23C22H14119.4°120.0°
O24C23C22H15119.4°120.0°
O24C23C22C5551.1°175.6°
O24C23C22O2167.0°66.5°
O24C23C22H3176.3°54.5°
O24C23H14H15121.7°120.0°
C36N45C46C54178.0°180.0°
C36N45C46N47179.5°180.0°
C36N45C54N532.4°0.1°
C36N45C54C48178.7°179.7°
N45C36C37H2034.2°37.3°
C36N45C46H220.6°0.3°
O32P29O31O30123.4°120.0°
P29O32C33H1622.9°59.9°
P29O32C33H1795.8°60.0°
O32P29O30H34123.5°60.0°
O16C15C17C10178.9°180.0°
O16C15C10C118.2°107.8°
O16C15C17O1974.3°180.0°
O16C15C17O18103.0°0.0°
O16C15C10C09116.6°12.2°
O16C15C10H1126.0°132.2°
C23C22C55C57111.5°121.6°
C23C22C55O56135.8°119.8°
C23C22C55O21117.9°119.5°
C23C22C55H3123.6°121.1°
C23C22O21H3117.6°121.0°
C23C22O21C20141.3°146.1°
C22C23H14H15121.6°120.0°
C23C22C55H2410.9°2.9°
O31P29O30H340.0°180.0°
C57C55O56C22114.5°114.7°
C57C55O56H24119.0°122.5°
C57C55C22H24122.4°118.7°
C55C57O58C20112.5°112.7°
C55C57O58H25125.5°123.6°
C55C57C20H25115.5°118.2°
C57C55C22O216.4°2.0°
C55C57C20O2140.8°36.9°
C55C57C20N06163.5°155.5°
C55C57C20H279.7°81.6°
C57C55C22H3124.9°117.4°
C57C55O56H38180.0°61.5°
C55C57O58H39151.8°61.4°
O56C55C22H24124.9°122.7°
O56C55C57O5828.4°20.4°
O56C55C57C2089.6°97.8°
O56C55C22O21106.2°120.6°
O56C55C22H312.2°1.2°
O56C55C57H25155.0°144.0°
C22C55C57O58144.7°139.0°
C22C55C57C2026.7°20.8°
C55C22O21H3121.1°119.3°
C55C22O21C2019.9°26.4°
C55C22C23H1468.4°55.6°
C55C22C23H15170.5°64.4°
C22C55C57H2588.7°97.4°
C22C55O56H3865.6°176.2°
O58C57C20H25123.4°123.6°
O58C57C20O21162.0°155.1°
O58C57C20N0675.4°86.3°
O58C57C20H241.4°36.6°
O58C57C55H2490.9°102.1°
C57C20O21C2236.4°39.9°
C57C20N06C0769.9°62.8°
C57C20O21N06114.3°118.6°
C57C20O21H2118.3°118.5°
C57C20N06H2116.2°122.9°
C57C20N06C05157.1°117.2°
C20C57C55H24151.1°139.6°
C20C57O58H3939.2°174.2°
C17C15C10C11173.0°72.2°
C15C17O19O18177.2°180.0°
C17C15C10C0962.2°167.8°
C17C15C10H155.2°47.8°
C15C17O18H32177.3°180.0°
C15C10C11C09120.7°120.0°
C15C10C11H1117.9°120.0°
C15C10C11C12137.6°176.7°
C15C10C09C0874.1°68.1°
C10C15C17O19104.6°0.0°
C10C15C17O1878.1°180.0°
C15C10C09H1117.6°120.0°
C15C10C09C04160.2°53.4°
C15C10C09H1143.8°172.7°
C15C10C11H1216.8°56.7°
C15C10C11H13101.6°63.4°
N45C46N47H22180.0°179.7°
C46N45C54N53179.6°179.8°
C46N45C54C480.7°0.3°
N45C46N47C481.6°0.3°
C46N45C36H19139.9°144.3°
C54N45C46N471.5°0.0°
N45C54N53C48178.8°179.9°
N45C54N53C52179.2°180.0°
N45C54C48N470.2°0.5°
N45C54C48C49179.9°180.0°
C54N45C36H1937.7°35.7°
C54N45C46H22178.6°179.7°
C10C11C12H12120.8°120.0°
C10C11C12H13120.8°120.0°
C11C10C09C0846.7°171.9°
C11C10C09H1121.5°120.0°
C10C11C12O14130.4°6.9°
C10C11C12O1351.2°173.1°
C11C10C09C0479.0°66.6°
C11C10C09H11164.6°52.7°
C10C11H12H13117.6°120.0°
C12C11C10C09101.6°63.4°
C11C12O14O13178.5°180.0°
C12C11C10H119.8°56.7°
C12C11H12H13117.6°120.0°
C11C12O13H31178.5°180.0°
C22O21C20N06150.7°158.5°
C22O21C20H281.8°78.6°
O21C22C23H14173.6°173.6°
O21C22C23H1552.5°53.6°
O21C22C55H24128.8°116.7°
C08C07N06H7180.0°179.7°
C07C08C09H9180.0°179.7°
C07C08C09C1099.9°136.5°
C08C07N06C20178.8°162.5°
C08C07N06C0548.3°17.5°
C07C08C09C0424.1°16.1°
C07C08C09H11142.7°104.2°
N06C07C08C0912.2°0.5°
C07N06C20O2145.3°51.4°
C07N06C20C05133.0°180.0°
C07N06C05C0446.5°17.6°
C07N06C20H2173.9°174.3°
C07N06C05H5133.5°162.6°
N06C07C08H9167.8°179.8°
C08C09C10C04125.7°121.5°
C08C09C10H11117.9°119.2°
C08C09C04H11118.7°120.3°
C08C09C04C0526.0°15.8°
C08C09C04C02157.2°163.8°
C08C09C10H1168.2°51.9°
C09C08C07H7167.8°179.8°
O19C17O18H320.0°0.0°
C46N47C48C541.1°0.5°
C46N47C48C49179.3°179.9°
C10C09C04H11116.0°119.3°
C10C09C04C0599.3°136.2°
C10C09C04C0277.5°43.4°
C10C09C08H980.1°43.8°
C09C10C11H12137.6°176.6°
C09C10C11H1319.1°56.6°
O14C12C11H12108.8°113.1°
O14C12C11H139.6°126.9°
O14C12O13H310.0°0.0°
C54N53C52N511.0°0.1°
N53C54C48N47178.8°179.6°
N53C54C48C490.8°0.1°
C54N53C52H23179.0°179.9°
C52N53C54C480.4°0.1°
N53C52N51H23180.0°180.0°
N53C52N51C492.1°0.1°
O13C12C11H1269.6°66.9°
O13C12C11H13172.0°53.1°
O21C20N06H2128.7°122.9°
O21C20N06C0587.7°128.6°
C20O21C22H3101.1°92.9°
O21C20C57H2574.6°81.2°
C20N06C05C04179.0°162.4°
C20N06C05H51.0°17.4°
C20N06C07H71.2°17.8°
N06C20C57H2548.0°37.3°
C54C48N47C49179.6°179.4°
C54C48C49N511.8°0.1°
C54C48C49N50179.9°180.0°
N06C05C04C098.6°0.1°
N06C05C04H5180.0°179.9°
N06C05C04C02168.4°179.6°
C05N06C20H241.0°5.7°
C05N06C07H7131.7°162.2°
C09C04C05C02176.9°179.6°
C09C04C02O033.9°72.2°
C09C04C02N01177.8°107.8°
C04C09C10H142.6°173.4°
C09C04C05H5171.4°179.8°
C04C09C08H9156.0°164.2°
C52N51C49C482.4°0.0°
C52N51C49N50179.5°180.0°
N47C48C49N51177.7°179.4°
N47C48C49N500.3°0.6°
C48N47C46H22178.4°180.0°
C48C49N51N50178.1°179.9°
C48C49N50H29178.1°0.0°
C48C49N50H3062.0°180.0°
C05C04C02O03173.0°108.2°
C05C04C02N015.3°71.9°
C05C04C09H11144.7°104.5°
C04C02O03N01178.2°180.0°
C02C04C05H511.6°0.6°
C02C04C09H1138.5°75.9°
C04C02N01H26178.4°175.2°
C04C02N01H271.6°4.8°
C49N51C52H23177.9°179.9°
N51C49N50H290.0°180.0°
N51C49N50H30120.0°0.0°
C49N50H29H30120.0°180.0°
O03C02N01H260.0°4.9°
O03C02N01H27180.0°175.2°
C02N01H26H27180.0°180.0°
H1C10C09H1173.9°67.3°
H1C10C11H12101.0°63.3°
H1C10C11H13140.5°176.6°
H2C20C57H25164.8°160.2°
H3C22C23H1456.8°65.4°
H3C22C23H1564.3°174.6°
H3C22C55H24112.7°123.9°
H7C07C08H912.2°0.1°
H9C08C09H1137.3°75.4°
H16C33C34H1876.7°65.5°
H17C33C34H1842.0°174.6°
H18C34C43H21166.2°123.8°
H19C36C37H2085.3°160.2°
H20C37C43H2144.4°21.3°
H21C43O44H3762.5°61.1°
H24C55C57H2535.7°21.5°
H24C55O56H3861.0°61.0°
H25C57O58H3982.8°62.2°

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon