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SummaryGeometryRelated PDB entries

EDN

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
NAACABsing1.47Å1.47Å
CABCACsing1.53Å1.51Å
CACNADsing1.47Å1.46Å
NAAHAA1sing1.01Å1.00Å
NAAHAA2sing1.01Å1.00Å
CABHAB1sing1.09Å1.10Å
CABHAB2sing1.09Å1.10Å
CACHAC1sing1.09Å1.10Å
CACHAC2sing1.09Å1.10Å
NADHAD1sing1.01Å1.00Å
NADHAD2sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
NAACABCAC106.7°109.4°
CABNAAHAA1109.5°111.0°
CABNAAHAA2109.5°111.0°
NAACABHAB1110.4°109.5°
NAACABHAB2111.0°109.5°
CABCACNAD107.3°109.4°
CACCABHAB1110.4°109.5°
CACCABHAB2111.1°109.5°
CABCACHAC1110.2°109.5°
CABCACHAC2110.7°109.5°
NADCACHAC1110.2°109.5°
NADCACHAC2110.7°109.5°
CACNADHAD1109.5°111.0°
CACNADHAD2109.4°111.0°
HAA1NAAHAA2109.5°111.0°
HAB1CABHAB2107.3°109.5°
HAC1CACHAC2107.8°109.5°
HAD1NADHAD2109.5°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
NAACABCACHAB1120.0°120.0°
NAACABCACHAB2121.1°120.0°
NAACABCACNAD0.1°180.0°
CABNAAHAA1HAA2120.0°124.0°
NAACABHAB1HAB2121.1°120.0°
NAACABCACHAC1120.1°60.0°
NAACABCACHAC2120.8°60.0°
CABCACNADHAC1120.0°120.0°
CABCACNADHAC2120.8°120.0°
CACCABNAAHAA1151.8°180.0°
CACCABNAAHAA288.2°56.0°
CACCABHAB1HAB2121.2°120.1°
CABCACHAC1HAC2120.9°120.1°
CABCACNADHAD112.0°180.0°
CABCACNADHAD2108.0°56.0°
NADCACCABHAB1119.9°60.0°
NADCACCABHAB2121.1°60.0°
NADCACHAC1HAC2120.9°120.0°
CACNADHAD1HAD2120.0°124.0°
HAA1NAACABHAB188.2°60.0°
HAA1NAACABHAB230.7°60.0°
HAA2NAACABHAB131.8°64.0°
HAA2NAACABHAB2150.7°176.0°
HAB1CABCACHAC10.1°180.0°
HAB1CABCACHAC2119.3°60.0°
HAB2CABCACHAC1118.9°60.0°
HAB2CABCACHAC20.3°180.0°
HAC1CACNADHAD1132.0°60.0°
HAC1CACNADHAD212.0°176.0°
HAC2CACNADHAD1108.8°60.0°
HAC2CACNADHAD2131.2°64.0°

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PDB entries from 2024-07-17

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