EBR
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C2A | C1 | sing | 1.51Å | 1.50Å | |
| O3 | C3 | sing | 1.36Å | 1.26Å | |
| C1 | C3 | doub | 1.35Å | 1.36Å | |
| C1 | N1 | sing | 1.37Å | 1.37Å | |
| C3 | C4 | sing | 1.47Å | 1.48Å | |
| NH | CA | doub | 1.30Å | 1.31Å | |
| NH | C4A | sing | 1.34Å | 1.35Å | |
| N1 | C6 | sing | 1.37Å | 1.36Å | |
| CA | CB | sing | 1.51Å | 1.48Å | |
| C4 | C4A | doub | 1.39Å | 1.41Å | |
| C4 | C5 | sing | 1.47Å | 1.45Å | |
| CE2 | CD2 | doub | 1.38Å | 1.38Å | Aromatic |
| CE2 | CZ | sing | 1.39Å | 1.39Å | Aromatic |
| CD2 | CG | sing | 1.38Å | 1.39Å | Aromatic |
| CZ | OH | sing | 1.36Å | 1.36Å | |
| CZ | CE1 | doub | 1.39Å | 1.39Å | Aromatic |
| CG | CD1 | doub | 1.38Å | 1.39Å | Aromatic |
| CG | CB | sing | 1.51Å | 1.52Å | |
| C6 | C5 | doub | 1.35Å | 1.35Å | |
| CE1 | CD1 | sing | 1.38Å | 1.38Å | Aromatic |
| C5 | C5A | sing | 1.51Å | 1.50Å | |
| C5A | O4P | sing | 1.43Å | 1.42Å | |
| O4P | P | sing | 1.61Å | 1.61Å | |
| O1P | P | doub | 1.48Å | 1.52Å | |
| P | O3P | sing | 1.61Å | 1.54Å | |
| P | O2P | sing | 1.61Å | 1.53Å | |
| CA | H1 | sing | 1.08Å | 1.08Å | |
| CB | H2 | sing | 1.09Å | 1.10Å | |
| CB | H3 | sing | 1.09Å | 1.10Å | |
| CD1 | H4 | sing | 1.08Å | 1.08Å | |
| CD2 | H5 | sing | 1.08Å | 1.08Å | |
| CE1 | H6 | sing | 1.08Å | 1.08Å | |
| CE2 | H7 | sing | 1.08Å | 1.08Å | |
| OH | H8 | sing | 0.97Å | 0.95Å | |
| C2A | H10 | sing | 1.09Å | 1.10Å | |
| C2A | H11 | sing | 1.09Å | 1.10Å | |
| C2A | H12 | sing | 1.09Å | 1.10Å | |
| C4A | H13 | sing | 1.08Å | 1.08Å | |
| C5A | H15 | sing | 1.09Å | 1.10Å | |
| C5A | H16 | sing | 1.09Å | 1.10Å | |
| C6 | H17 | sing | 1.08Å | 1.08Å | |
| O2P | H18 | sing | 0.97Å | 0.95Å | |
| O3P | H19 | sing | 0.97Å | 0.95Å | |
| N1 | H9 | sing | 0.97Å | 1.00Å | |
| O3 | H14 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2A | C1 | C3 | 122.6° | 119.7° |
| C2A | C1 | N1 | 115.6° | 119.7° |
| C1 | C2A | H10 | 109.5° | 109.5° |
| C1 | C2A | H11 | 109.4° | 109.5° |
| C1 | C2A | H12 | 109.5° | 109.4° |
| O3 | C3 | C1 | 121.2° | 121.0° |
| O3 | C3 | C4 | 121.2° | 121.0° |
| C3 | O3 | H14 | 109.5° | 114.0° |
| C3 | C1 | N1 | 121.8° | 120.6° |
| C1 | C3 | C4 | 117.6° | 118.0° |
| C1 | N1 | C6 | 121.6° | 122.1° |
| C1 | N1 | H9 | 119.2° | 118.9° |
| C3 | C4 | C4A | 117.3° | 121.4° |
| C3 | C4 | C5 | 118.3° | 117.2° |
| CA | NH | C4A | 125.4° | 120.0° |
| NH | CA | CB | 121.6° | 120.0° |
| NH | CA | H1 | 119.2° | 120.0° |
| NH | C4A | C4 | 122.9° | 120.0° |
| NH | C4A | H13 | 118.6° | 120.0° |
| N1 | C6 | C5 | 122.1° | 120.7° |
| N1 | C6 | H17 | 119.0° | 119.6° |
| C6 | N1 | H9 | 119.2° | 118.9° |
| CA | CB | CG | 110.3° | 109.5° |
| CB | CA | H1 | 119.2° | 120.0° |
| CA | CB | H2 | 109.3° | 109.5° |
| CA | CB | H3 | 109.3° | 109.5° |
| C4A | C4 | C5 | 124.4° | 121.4° |
| C4 | C4A | H13 | 118.6° | 120.0° |
| C4 | C5 | C6 | 118.6° | 118.2° |
| C4 | C5 | C5A | 119.3° | 120.9° |
| CD2 | CE2 | CZ | 119.9° | 119.9° |
| CE2 | CD2 | CG | 121.1° | 120.1° |
| CE2 | CD2 | H5 | 119.4° | 120.0° |
| CD2 | CE2 | H7 | 120.0° | 120.0° |
| CE2 | CZ | OH | 120.0° | 120.0° |
| CE2 | CZ | CE1 | 119.6° | 119.9° |
| CZ | CE2 | H7 | 120.1° | 120.0° |
| CD2 | CG | CD1 | 118.4° | 120.1° |
| CD2 | CG | CB | 120.8° | 120.0° |
| CG | CD2 | H5 | 119.5° | 119.9° |
| OH | CZ | CE1 | 120.4° | 120.1° |
| CZ | OH | H8 | 109.5° | 114.0° |
| CZ | CE1 | CD1 | 119.9° | 120.0° |
| CZ | CE1 | H6 | 120.1° | 120.0° |
| CD1 | CG | CB | 120.8° | 120.0° |
| CG | CD1 | CE1 | 121.1° | 120.1° |
| CG | CD1 | H4 | 119.5° | 120.0° |
| CG | CB | H2 | 109.3° | 109.5° |
| CG | CB | H3 | 109.3° | 109.5° |
| C6 | C5 | C5A | 122.0° | 120.9° |
| C5 | C6 | H17 | 119.0° | 119.6° |
| CE1 | CD1 | H4 | 119.4° | 119.9° |
| CD1 | CE1 | H6 | 120.1° | 120.1° |
| C5 | C5A | O4P | 109.0° | 109.5° |
| C5 | C5A | H15 | 109.6° | 109.4° |
| C5 | C5A | H16 | 109.6° | 109.4° |
| C5A | O4P | P | 120.0° | 123.0° |
| O4P | C5A | H15 | 109.6° | 109.5° |
| O4P | C5A | H16 | 109.6° | 109.5° |
| O4P | P | O1P | 108.4° | 109.5° |
| O4P | P | O3P | 103.1° | 109.5° |
| O4P | P | O2P | 109.6° | 109.5° |
| O1P | P | O3P | 113.9° | 109.5° |
| O1P | P | O2P | 110.9° | 109.5° |
| O3P | P | O2P | 110.6° | 109.4° |
| P | O3P | H19 | 109.5° | 114.1° |
| P | O2P | H18 | 109.5° | 114.0° |
| H2 | CB | H3 | 109.5° | 109.4° |
| H10 | C2A | H11 | 109.5° | 109.5° |
| H10 | C2A | H12 | 109.5° | 109.5° |
| H11 | C2A | H12 | 109.4° | 109.5° |
| H15 | C5A | H16 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C2A | C1 | C3 | O3 | 4.8° | 0.7° |
| C2A | C1 | C3 | N1 | 178.8° | 179.8° |
| C2A | C1 | C3 | C4 | 177.0° | 179.3° |
| C2A | C1 | N1 | C6 | 177.9° | 164.6° |
| C1 | C2A | H10 | H11 | 120.0° | 120.0° |
| C1 | C2A | H10 | H12 | 120.0° | 120.0° |
| C1 | C2A | H11 | H12 | 120.0° | 120.0° |
| C2A | C1 | N1 | H9 | 2.0° | 15.3° |
| O3 | C3 | C1 | C4 | 178.1° | 180.0° |
| O3 | C3 | C1 | N1 | 176.4° | 179.5° |
| O3 | C3 | C4 | C4A | 4.4° | 13.2° |
| O3 | C3 | C4 | C5 | 176.4° | 166.7° |
| C3 | C1 | N1 | C6 | 0.9° | 15.2° |
| C1 | C3 | C4 | C4A | 177.4° | 166.8° |
| C1 | C3 | C4 | C5 | 1.7° | 13.2° |
| C3 | C1 | C2A | H10 | 180.0° | 90.0° |
| C3 | C1 | C2A | H11 | 60.0° | 150.0° |
| C3 | C1 | C2A | H12 | 60.0° | 30.0° |
| C3 | C1 | N1 | H9 | 179.1° | 164.9° |
| C1 | C3 | O3 | H14 | 180.0° | 0.0° |
| N1 | C1 | C3 | C4 | 1.7° | 0.5° |
| C1 | N1 | C6 | H9 | 180.0° | 179.9° |
| C1 | N1 | C6 | C5 | 0.0° | 15.1° |
| N1 | C1 | C2A | H10 | 1.2° | 90.2° |
| N1 | C1 | C2A | H11 | 118.9° | 29.8° |
| N1 | C1 | C2A | H12 | 121.2° | 149.8° |
| C1 | N1 | C6 | H17 | 180.0° | 164.9° |
| C3 | C4 | C4A | NH | 9.0° | 0.0° |
| C3 | C4 | C4A | C5 | 179.1° | 180.0° |
| C3 | C4 | C5 | C6 | 0.8° | 13.4° |
| C3 | C4 | C5 | C5A | 178.1° | 166.6° |
| C3 | C4 | C4A | H13 | 171.0° | 180.0° |
| C4 | C3 | O3 | H14 | 2.0° | 180.0° |
| NH | CA | CB | H1 | 180.0° | 179.7° |
| CA | NH | C4A | C4 | 179.4° | 168.1° |
| NH | CA | CB | CG | 173.3° | 126.3° |
| NH | CA | CB | H2 | 53.2° | 113.6° |
| NH | CA | CB | H3 | 66.6° | 6.3° |
| CA | NH | C4A | H13 | 0.6° | 12.0° |
| C4A | NH | CA | CB | 0.2° | 7.4° |
| NH | C4A | C4 | H13 | 180.0° | 180.0° |
| NH | C4A | C4 | C5 | 171.9° | 180.0° |
| C4A | NH | CA | H1 | 179.9° | 172.3° |
| N1 | C6 | C5 | C4 | 0.0° | 0.2° |
| N1 | C6 | C5 | H17 | 180.0° | 180.0° |
| N1 | C6 | C5 | C5A | 178.9° | 179.7° |
| CA | CB | CG | CD2 | 77.1° | 90.3° |
| CA | CB | CG | CD1 | 105.1° | 90.0° |
| CA | CB | CG | H2 | 120.1° | 120.0° |
| CA | CB | CG | H3 | 120.1° | 120.0° |
| CA | CB | H2 | H3 | 119.6° | 120.0° |
| C4A | C4 | C5 | C6 | 178.2° | 166.6° |
| C4A | C4 | C5 | C5A | 2.9° | 13.3° |
| C4 | C5 | C6 | C5A | 178.9° | 180.0° |
| C4 | C5 | C5A | O4P | 73.5° | 180.0° |
| C5 | C4 | C4A | H13 | 8.1° | 0.0° |
| C4 | C5 | C5A | H15 | 166.6° | 60.0° |
| C4 | C5 | C5A | H16 | 46.4° | 60.0° |
| C4 | C5 | C6 | H17 | 180.0° | 179.8° |
| CD2 | CE2 | CZ | H7 | 180.0° | 179.5° |
| CE2 | CD2 | CG | H5 | 180.0° | 179.9° |
| CD2 | CE2 | CZ | OH | 177.4° | 180.0° |
| CD2 | CE2 | CZ | CE1 | 1.0° | 0.9° |
| CE2 | CD2 | CG | CD1 | 1.2° | 0.0° |
| CE2 | CD2 | CG | CB | 176.7° | 179.7° |
| CZ | CE2 | CD2 | CG | 0.1° | 0.6° |
| CE2 | CZ | OH | CE1 | 178.4° | 179.1° |
| CE2 | CZ | CE1 | CD1 | 1.1° | 0.6° |
| CZ | CE2 | CD2 | H5 | 179.9° | 179.5° |
| CE2 | CZ | CE1 | H6 | 178.8° | 179.4° |
| CE2 | CZ | OH | H8 | 180.0° | 90.0° |
| CD2 | CG | CD1 | CB | 177.8° | 179.7° |
| CD2 | CG | CD1 | CE1 | 1.1° | 0.3° |
| CD2 | CG | CB | H2 | 162.8° | 149.7° |
| CD2 | CG | CB | H3 | 43.0° | 29.8° |
| CD2 | CG | CD1 | H4 | 178.9° | 179.7° |
| CG | CD2 | CE2 | H7 | 179.8° | 179.9° |
| OH | CZ | CE1 | CD1 | 177.3° | 179.7° |
| OH | CZ | CE1 | H6 | 2.7° | 0.3° |
| OH | CZ | CE2 | H7 | 2.6° | 0.5° |
| CZ | CE1 | CD1 | CG | 0.1° | 0.0° |
| CZ | CE1 | CD1 | H6 | 180.0° | 180.0° |
| CZ | CE1 | CD1 | H4 | 179.9° | 180.0° |
| CE1 | CZ | CE2 | H7 | 179.0° | 179.6° |
| CE1 | CZ | OH | H8 | 1.6° | 90.8° |
| CG | CD1 | CE1 | H4 | 180.0° | 180.0° |
| CD1 | CG | CB | H2 | 15.0° | 30.0° |
| CD1 | CG | CB | H3 | 134.7° | 149.9° |
| CD1 | CG | CD2 | H5 | 178.8° | 179.9° |
| CG | CD1 | CE1 | H6 | 179.9° | 180.0° |
| CB | CG | CD1 | CE1 | 176.8° | 180.0° |
| CG | CB | CA | H1 | 6.7° | 54.0° |
| CG | CB | H2 | H3 | 119.7° | 120.0° |
| CB | CG | CD1 | H4 | 3.2° | 0.0° |
| CB | CG | CD2 | H5 | 3.3° | 0.2° |
| C6 | C5 | C5A | O4P | 107.6° | 0.0° |
| C6 | C5 | C5A | H15 | 12.3° | 120.0° |
| C6 | C5 | C5A | H16 | 132.4° | 120.0° |
| C5 | C6 | N1 | H9 | 179.9° | 165.0° |
| C5 | C5A | O4P | H15 | 119.9° | 120.0° |
| C5 | C5A | O4P | H16 | 119.9° | 119.9° |
| C5 | C5A | O4P | P | 156.3° | 180.0° |
| C5 | C5A | H15 | H16 | 120.2° | 119.9° |
| C5A | C5 | C6 | H17 | 1.1° | 0.3° |
| C5A | O4P | P | O1P | 64.4° | 55.0° |
| C5A | O4P | P | O3P | 174.6° | 65.1° |
| C5A | O4P | P | O2P | 56.8° | 175.0° |
| O4P | C5A | H15 | H16 | 120.2° | 120.1° |
| O4P | P | O1P | O3P | 114.1° | 120.0° |
| O4P | P | O1P | O2P | 120.3° | 120.0° |
| O4P | P | O3P | O2P | 117.1° | 120.0° |
| P | O4P | C5A | H15 | 83.8° | 60.0° |
| P | O4P | C5A | H16 | 36.3° | 60.1° |
| O4P | P | O2P | H18 | 119.7° | 180.0° |
| O4P | P | O3P | H19 | 117.2° | 60.0° |
| O1P | P | O3P | O2P | 125.7° | 120.0° |
| O1P | P | O2P | H18 | 0.0° | 60.0° |
| O1P | P | O3P | H19 | 0.0° | 180.0° |
| O3P | P | O2P | H18 | 127.3° | 60.0° |
| O2P | P | O3P | H19 | 125.7° | 60.0° |
| H1 | CA | CB | H2 | 126.8° | 66.0° |
| H1 | CA | CB | H3 | 113.5° | 174.0° |
| H4 | CD1 | CE1 | H6 | 0.1° | 0.0° |
| H5 | CD2 | CE2 | H7 | 0.2° | 0.0° |
| H10 | C2A | H11 | H12 | 120.0° | 120.0° |
| H17 | C6 | N1 | H9 | 0.1° | 15.0° |
