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EBM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
IC1sing2.09Å2.09Å
NC7sing1.35Å1.33Å
NC8sing1.46Å1.45Å
OC7doub1.22Å1.22Å
C1C2doub1.40Å1.49ÅAromatic
C1C6sing1.38Å1.40ÅAromatic
C2C3sing1.40Å1.40ÅAromatic
C2C7sing1.48Å1.51Å
C3C4doub1.38Å1.40ÅAromatic
C4C5sing1.38Å1.40ÅAromatic
C5C6doub1.38Å1.40ÅAromatic
C8C9sing1.53Å1.52Å
C8C10sing1.53Å1.52Å
NHNsing0.97Å1.00Å
C3H3sing1.08Å1.08Å
C4H4sing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C8H8sing1.09Å1.10Å
C9H9sing1.09Å1.10Å
C9H9Asing1.09Å1.10Å
C9H9Bsing1.09Å1.10Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C10H10Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
IC1C2121.5°120.1°
IC1C6119.6°120.1°
C7NC8122.6°120.0°
NC7O121.5°120.0°
NC7C2119.3°120.0°
C7NHN118.7°120.0°
NC8C9110.1°109.5°
NC8C10109.9°109.5°
C8NHN118.7°120.0°
NC8H8109.3°109.4°
OC7C2119.2°120.0°
C2C1C6119.0°119.9°
C1C2C3118.4°119.7°
C1C2C7121.3°120.1°
C1C6C5120.2°120.1°
C1C6H6119.9°119.9°
C3C2C7120.3°120.2°
C2C3C4120.3°119.8°
C2C3H3119.9°120.1°
C3C4C5121.2°120.2°
C4C3H3119.8°120.1°
C3C4H4119.4°119.9°
C4C5C6120.9°120.3°
C5C4H4119.4°119.9°
C4C5H5119.5°119.9°
C6C5H5119.6°119.8°
C5C6H6119.9°120.0°
C9C8C10111.1°109.5°
C9C8H8108.1°109.5°
C8C9H9109.5°109.5°
C8C9H9A109.5°109.4°
C8C9H9B109.5°109.5°
C10C8H8108.3°109.5°
C8C10H10109.5°109.5°
C8C10H10A109.5°109.5°
C8C10H10B109.4°109.5°
H9C9H9A109.5°109.5°
H9C9H9B109.5°109.5°
H9AC9H9B109.5°109.5°
H10C10H10A109.5°109.5°
H10C10H10B109.4°109.4°
H10AC10H10B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
IC1C2C6180.0°179.8°
IC1C2C3179.9°180.0°
IC1C2C70.1°0.0°
IC1C6C5180.0°179.8°
IC1C6H60.0°0.1°
C7NC8HN180.0°179.8°
NC7OC2179.2°180.0°
NC7C2C1166.3°180.0°
NC7C2C313.9°0.0°
C7NC8C9106.9°155.0°
C7NC8C10130.5°85.0°
C7NC8H811.7°35.0°
C8NC7O59.0°0.0°
C8NC7C2121.8°180.0°
NC8C9C10121.9°120.0°
NC8C9H8119.4°120.0°
NC8C10H8119.4°119.9°
NC8C9H9180.0°60.0°
NC8C9H9A60.0°180.0°
NC8C9H9B60.0°60.0°
NC8C10H10180.0°60.0°
NC8C10H10A60.0°60.0°
NC8C10H10B60.0°180.0°
OC7C2C114.4°0.0°
OC7C2C3165.4°180.0°
OC7NHN121.1°179.8°
C1C2C3C7179.8°180.0°
C1C2C3C40.1°0.1°
C2C1C6C50.0°0.5°
C1C2C3H3179.9°180.0°
C2C1C6H6180.0°179.7°
C6C1C2C30.1°0.2°
C6C1C2C7179.9°179.8°
C1C6C5C40.1°0.5°
C1C6C5H6180.0°179.8°
C1C6C5H5179.9°179.8°
C2C3C4H3180.0°179.9°
C2C3C4C50.0°0.0°
C2C3C4H4180.0°180.0°
C7C2C3C4179.9°180.0°
C2C7NHN58.2°0.3°
C7C2C3H30.1°0.0°
C3C4C5H4180.0°180.0°
C3C4C5C60.1°0.2°
C3C4C5H5179.9°180.0°
C4C5C6H5180.0°179.7°
C5C4C3H3180.0°180.0°
C4C5C6H6179.9°179.7°
C6C5C4H4180.0°179.7°
C9C8C10H8118.6°120.1°
C9C8NHN73.1°24.8°
C8C9H9H9A120.0°120.0°
C8C9H9H9B120.0°120.0°
C8C9H9AH9B120.0°120.0°
C9C8C10H1058.0°60.0°
C9C8C10H10A62.0°180.0°
C9C8C10H10B177.9°60.0°
C10C8NHN49.5°95.3°
C10C8C9H958.1°60.0°
C10C8C9H9A178.1°60.0°
C10C8C9H9B61.9°180.0°
C8C10H10H10A120.0°120.0°
C8C10H10H10B120.0°120.0°
C8C10H10AH10B120.0°120.0°
HNNC8H8168.3°144.8°
H3C3C4H40.0°0.0°
H4C4C5H50.1°0.0°
H5C5C6H60.1°0.0°
H8C8C9H960.6°180.0°
H8C8C9H9A59.4°60.0°
H8C8C9H9B179.4°60.0°
H8C8C10H1060.6°180.0°
H8C8C10H10A179.4°60.0°
H8C8C10H10B59.4°60.1°
H9C9H9AH9B120.0°120.0°
H10C10H10AH10B120.0°120.0°

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PDB entries from 2024-07-10

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