E7X
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| OXT | C | doub | 1.22Å | 1.29Å | |
| C | O | sing | 1.22Å | 1.27Å | |
| C | CA | sing | 1.51Å | 1.57Å | |
| N6 | C6 | sing | 1.38Å | 1.49Å | |
| CA | N | sing | 1.47Å | 1.43Å | |
| CA | CB | sing | 1.53Å | 1.56Å | |
| N1 | C6 | doub | 1.33Å | 1.33Å | Aromatic |
| N1 | C2 | sing | 1.32Å | 1.33Å | Aromatic |
| C6 | C5 | sing | 1.41Å | 1.40Å | Aromatic |
| C2 | N3 | doub | 1.32Å | 1.31Å | Aromatic |
| C5 | N7 | sing | 1.36Å | 1.33Å | Aromatic |
| C5 | C4 | doub | 1.40Å | 1.38Å | Aromatic |
| N7 | C8 | doub | 1.30Å | 1.32Å | Aromatic |
| N3 | C4 | sing | 1.33Å | 1.35Å | Aromatic |
| C4 | N9 | sing | 1.37Å | 1.34Å | Aromatic |
| CB | CG | sing | 1.53Å | 1.58Å | |
| C8 | N9 | sing | 1.36Å | 1.33Å | Aromatic |
| N9 | C1' | sing | 1.46Å | 1.47Å | |
| CG | N01 | sing | 1.47Å | 1.49Å | |
| C1' | O4' | sing | 1.44Å | 1.61Å | |
| C1' | C2' | sing | 1.55Å | 1.35Å | |
| O4' | C4' | sing | 1.44Å | 1.30Å | |
| O2' | C2' | sing | 1.43Å | 1.49Å | |
| C2' | C3' | sing | 1.55Å | 1.51Å | |
| C4' | C5' | sing | 1.53Å | 1.54Å | |
| C4' | C3' | sing | 1.54Å | 1.56Å | |
| N01 | C5' | sing | 1.47Å | 1.51Å | |
| N01 | CE | sing | 1.47Å | 1.50Å | |
| O01 | C01 | sing | 1.43Å | 1.20Å | |
| CE | C01 | sing | 1.53Å | 1.52Å | |
| C3' | O3' | sing | 1.43Å | 1.38Å | |
| C2 | H1 | sing | 1.08Å | 1.08Å | |
| C8 | H2 | sing | 1.08Å | 1.08Å | |
| N | H3 | sing | 1.01Å | 1.00Å | |
| N | H4 | sing | 1.01Å | 1.00Å | |
| CA | H6 | sing | 1.09Å | 1.10Å | |
| CB | H8 | sing | 1.09Å | 1.10Å | |
| CB | H9 | sing | 1.09Å | 1.10Å | |
| CG | H10 | sing | 1.09Å | 1.10Å | |
| CG | H11 | sing | 1.09Å | 1.10Å | |
| CE | H12 | sing | 1.09Å | 1.10Å | |
| CE | H13 | sing | 1.09Å | 1.10Å | |
| C5' | H14 | sing | 1.09Å | 1.10Å | |
| C5' | H15 | sing | 1.09Å | 1.10Å | |
| C4' | H16 | sing | 1.09Å | 1.10Å | |
| C3' | H17 | sing | 1.09Å | 1.10Å | |
| O3' | H18 | sing | 0.97Å | 0.95Å | |
| C2' | H19 | sing | 1.09Å | 1.10Å | |
| O2' | H20 | sing | 0.97Å | 0.95Å | |
| C1' | H21 | sing | 1.09Å | 1.10Å | |
| C01 | H22 | sing | 1.09Å | 1.10Å | |
| N6 | H24 | sing | 0.97Å | 1.00Å | |
| N6 | H25 | sing | 0.97Å | 1.00Å | |
| C01 | H7 | sing | 1.09Å | 1.10Å | |
| O01 | H23 | sing | 0.97Å | 0.95Å | |
| N | H5 | sing | 1.01Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OXT | C | O | 120.4° | 120.0° |
| OXT | C | CA | 119.9° | 120.0° |
| O | C | CA | 119.7° | 120.0° |
| C | CA | N | 107.1° | 109.5° |
| C | CA | CB | 110.6° | 109.4° |
| C | CA | H6 | 108.5° | 109.5° |
| N6 | C6 | N1 | 121.7° | 120.8° |
| N6 | C6 | C5 | 120.3° | 120.8° |
| C6 | N6 | H24 | 109.5° | 120.0° |
| C6 | N6 | H25 | 109.5° | 120.0° |
| N | CA | CB | 111.8° | 109.5° |
| CA | N | H3 | 109.5° | 109.5° |
| CA | N | H4 | 109.4° | 109.5° |
| N | CA | H6 | 110.3° | 109.5° |
| CA | N | H5 | 109.5° | 109.5° |
| CA | CB | CG | 116.5° | 109.4° |
| CB | CA | H6 | 108.6° | 109.4° |
| CA | CB | H8 | 107.7° | 109.5° |
| CA | CB | H9 | 107.7° | 109.5° |
| C6 | N1 | C2 | 121.3° | 121.2° |
| N1 | C6 | C5 | 118.0° | 118.4° |
| N1 | C2 | N3 | 122.1° | 122.5° |
| N1 | C2 | H1 | 118.9° | 118.7° |
| C6 | C5 | N7 | 132.7° | 134.6° |
| C6 | C5 | C4 | 119.9° | 118.2° |
| C2 | N3 | C4 | 120.7° | 120.6° |
| N3 | C2 | H1 | 119.0° | 118.8° |
| N7 | C5 | C4 | 107.3° | 107.2° |
| C5 | N7 | C8 | 108.3° | 109.4° |
| C5 | C4 | N3 | 117.9° | 119.1° |
| C5 | C4 | N9 | 106.8° | 106.0° |
| N7 | C8 | N9 | 110.0° | 110.0° |
| N7 | C8 | H2 | 125.0° | 125.0° |
| N3 | C4 | N9 | 135.2° | 134.9° |
| C4 | N9 | C8 | 107.6° | 107.4° |
| C4 | N9 | C1' | 127.7° | 126.3° |
| CB | CG | N01 | 112.5° | 109.5° |
| CG | CB | H8 | 107.7° | 109.5° |
| CG | CB | H9 | 107.7° | 109.5° |
| CB | CG | H10 | 108.7° | 109.5° |
| CB | CG | H11 | 108.7° | 109.5° |
| C8 | N9 | C1' | 124.7° | 126.3° |
| N9 | C8 | H2 | 125.0° | 125.0° |
| N9 | C1' | O4' | 112.1° | 110.4° |
| N9 | C1' | C2' | 113.0° | 110.4° |
| N9 | C1' | H21 | 108.6° | 110.5° |
| CG | N01 | C5' | 116.5° | 111.0° |
| CG | N01 | CE | 110.3° | 111.0° |
| N01 | CG | H10 | 108.7° | 109.5° |
| N01 | CG | H11 | 108.7° | 109.4° |
| O4' | C1' | C2' | 105.8° | 104.8° |
| C1' | O4' | C4' | 103.1° | 105.3° |
| O4' | C1' | H21 | 106.8° | 110.4° |
| C1' | C2' | O2' | 108.1° | 110.6° |
| C1' | C2' | C3' | 105.1° | 104.0° |
| C1' | C2' | H19 | 112.9° | 110.5° |
| C2' | C1' | H21 | 110.3° | 110.3° |
| O4' | C4' | C5' | 118.3° | 110.4° |
| O4' | C4' | C3' | 99.3° | 104.8° |
| O4' | C4' | H16 | 111.9° | 110.5° |
| O2' | C2' | C3' | 110.0° | 110.5° |
| O2' | C2' | H19 | 110.5° | 110.5° |
| C2' | O2' | H20 | 109.5° | 114.0° |
| C2' | C3' | C4' | 100.2° | 104.1° |
| C2' | C3' | O3' | 113.9° | 110.5° |
| C2' | C3' | H17 | 109.6° | 110.6° |
| C3' | C2' | H19 | 110.2° | 110.5° |
| C5' | C4' | C3' | 110.3° | 110.4° |
| C4' | C5' | N01 | 120.8° | 109.5° |
| C4' | C5' | H14 | 106.6° | 109.5° |
| C4' | C5' | H15 | 106.6° | 109.5° |
| C5' | C4' | H16 | 108.4° | 110.3° |
| C4' | C3' | O3' | 111.8° | 110.5° |
| C3' | C4' | H16 | 108.1° | 110.4° |
| C4' | C3' | H17 | 109.0° | 110.5° |
| C5' | N01 | CE | 104.6° | 111.0° |
| N01 | C5' | H14 | 106.6° | 109.4° |
| N01 | C5' | H15 | 106.5° | 109.4° |
| N01 | CE | C01 | 112.1° | 109.5° |
| N01 | CE | H12 | 108.8° | 109.5° |
| N01 | CE | H13 | 108.8° | 109.4° |
| O01 | C01 | CE | 118.7° | 109.5° |
| O01 | C01 | H22 | 107.1° | 109.5° |
| O01 | C01 | H7 | 107.1° | 109.5° |
| C01 | O01 | H23 | 109.5° | 114.0° |
| C01 | CE | H12 | 108.8° | 109.5° |
| C01 | CE | H13 | 108.8° | 109.5° |
| CE | C01 | H22 | 107.1° | 109.5° |
| CE | C01 | H7 | 107.1° | 109.5° |
| O3' | C3' | H17 | 111.6° | 110.4° |
| C3' | O3' | H18 | 109.5° | 114.0° |
| H3 | N | H4 | 109.5° | 109.5° |
| H3 | N | H5 | 109.4° | 109.4° |
| H4 | N | H5 | 109.5° | 109.4° |
| H8 | CB | H9 | 109.5° | 109.5° |
| H10 | CG | H11 | 109.5° | 109.5° |
| H12 | CE | H13 | 109.5° | 109.5° |
| H14 | C5' | H15 | 109.5° | 109.5° |
| H22 | C01 | H7 | 109.5° | 109.5° |
| H24 | N6 | H25 | 109.4° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OXT | C | O | CA | 179.4° | 180.0° |
| OXT | C | CA | N | 47.1° | 10.0° |
| OXT | C | CA | CB | 169.2° | 110.0° |
| OXT | C | CA | H6 | 71.9° | 130.0° |
| O | C | CA | N | 132.3° | 170.0° |
| O | C | CA | CB | 10.2° | 70.0° |
| O | C | CA | H6 | 108.7° | 50.0° |
| C | CA | N | CB | 121.2° | 120.0° |
| C | CA | N | H6 | 117.8° | 120.1° |
| C | CA | CB | H6 | 118.9° | 120.0° |
| C | CA | CB | CG | 108.7° | 175.0° |
| C | CA | N | H3 | 180.0° | 180.0° |
| C | CA | N | H4 | 60.0° | 60.0° |
| C | CA | CB | H8 | 130.3° | 65.0° |
| C | CA | CB | H9 | 12.3° | 55.1° |
| C | CA | N | H5 | 60.0° | 60.0° |
| N6 | C6 | N1 | C5 | 179.6° | 179.8° |
| N6 | C6 | N1 | C2 | 179.7° | 179.6° |
| N6 | C6 | C5 | N7 | 0.0° | 0.0° |
| N6 | C6 | C5 | C4 | 180.0° | 179.5° |
| C6 | N6 | H24 | H25 | 120.0° | 179.9° |
| N | CA | CB | H6 | 121.9° | 120.0° |
| N | CA | CB | CG | 132.1° | 65.0° |
| CA | N | H3 | H4 | 120.0° | 120.1° |
| CA | N | H3 | H5 | 120.0° | 120.0° |
| CA | N | H4 | H5 | 120.0° | 120.0° |
| N | CA | CB | H8 | 11.1° | 55.0° |
| N | CA | CB | H9 | 106.9° | 175.0° |
| CA | CB | CG | H8 | 121.0° | 120.0° |
| CA | CB | CG | H9 | 121.0° | 120.0° |
| CA | CB | CG | N01 | 136.2° | 180.0° |
| CB | CA | N | H3 | 58.7° | 60.0° |
| CB | CA | N | H4 | 178.8° | 180.0° |
| CA | CB | H8 | H9 | 116.8° | 120.1° |
| CA | CB | CG | H10 | 103.4° | 60.0° |
| CA | CB | CG | H11 | 15.7° | 60.0° |
| CB | CA | N | H5 | 61.2° | 60.0° |
| C6 | N1 | C2 | N3 | 0.2° | 0.1° |
| N1 | C6 | C5 | N7 | 179.6° | 179.9° |
| N1 | C6 | C5 | C4 | 0.5° | 0.7° |
| C6 | N1 | C2 | H1 | 179.8° | 179.7° |
| N1 | C6 | N6 | H24 | 0.0° | 179.9° |
| N1 | C6 | N6 | H25 | 120.0° | 0.2° |
| C2 | N1 | C6 | C5 | 0.1° | 0.6° |
| N1 | C2 | N3 | H1 | 180.0° | 179.8° |
| N1 | C2 | N3 | C4 | 0.2° | 0.2° |
| C6 | C5 | N7 | C4 | 179.9° | 179.5° |
| C6 | C5 | N7 | C8 | 179.8° | 179.8° |
| C6 | C5 | C4 | N3 | 0.5° | 0.4° |
| C6 | C5 | C4 | N9 | 179.7° | 180.0° |
| C5 | C6 | N6 | H24 | 179.5° | 0.0° |
| C5 | C6 | N6 | H25 | 59.5° | 180.0° |
| C2 | N3 | C4 | C5 | 0.1° | 0.1° |
| C2 | N3 | C4 | N9 | 180.0° | 179.4° |
| N7 | C5 | C4 | N3 | 179.6° | 180.0° |
| N7 | C5 | C4 | N9 | 0.3° | 0.4° |
| C5 | N7 | C8 | N9 | 0.2° | 0.8° |
| C5 | N7 | C8 | H2 | 179.9° | 179.7° |
| C4 | C5 | N7 | C8 | 0.1° | 0.7° |
| C5 | C4 | N3 | N9 | 179.8° | 179.5° |
| C5 | C4 | N9 | C8 | 0.4° | 0.0° |
| C5 | C4 | N9 | C1' | 179.6° | 179.9° |
| N7 | C8 | N9 | C4 | 0.3° | 0.5° |
| N7 | C8 | N9 | H2 | 180.0° | 179.5° |
| N7 | C8 | N9 | C1' | 179.6° | 179.5° |
| N3 | C4 | N9 | C8 | 179.5° | 179.5° |
| N3 | C4 | N9 | C1' | 0.2° | 0.5° |
| C4 | N3 | C2 | H1 | 179.8° | 180.0° |
| C4 | N9 | C8 | C1' | 179.3° | 180.0° |
| C4 | N9 | C1' | O4' | 176.2° | 156.5° |
| C4 | N9 | C1' | C2' | 64.3° | 88.1° |
| C4 | N9 | C8 | H2 | 179.7° | 180.0° |
| C4 | N9 | C1' | H21 | 58.4° | 34.1° |
| CB | CG | N01 | H10 | 120.4° | 120.0° |
| CB | CG | N01 | H11 | 120.4° | 120.0° |
| CB | CG | N01 | C5' | 150.3° | 170.0° |
| CB | CG | N01 | CE | 90.7° | 66.0° |
| CG | CB | CA | H6 | 10.2° | 55.0° |
| CG | CB | H8 | H9 | 116.8° | 120.0° |
| CB | CG | H10 | H11 | 118.6° | 120.0° |
| C8 | N9 | C1' | O4' | 2.9° | 23.5° |
| C8 | N9 | C1' | C2' | 116.6° | 91.9° |
| C8 | N9 | C1' | H21 | 120.7° | 145.8° |
| N9 | C1' | O4' | C2' | 123.7° | 118.8° |
| N9 | C1' | O4' | H21 | 118.8° | 122.4° |
| N9 | C1' | C2' | H21 | 121.7° | 122.3° |
| N9 | C1' | O4' | C4' | 151.6° | 159.3° |
| N9 | C1' | C2' | O2' | 125.8° | 98.5° |
| N9 | C1' | C2' | C3' | 116.9° | 142.8° |
| C1' | N9 | C8 | H2 | 0.4° | 0.1° |
| N9 | C1' | C2' | H19 | 3.3° | 24.2° |
| CG | N01 | C5' | C4' | 30.5° | 76.0° |
| CG | N01 | C5' | CE | 122.1° | 124.0° |
| CG | N01 | CE | C01 | 91.3° | 163.4° |
| N01 | CG | CB | H8 | 15.2° | 60.0° |
| N01 | CG | CB | H9 | 102.8° | 60.0° |
| N01 | CG | H10 | H11 | 118.6° | 120.0° |
| CG | N01 | CE | H12 | 29.0° | 76.6° |
| CG | N01 | CE | H13 | 148.3° | 43.4° |
| CG | N01 | C5' | H14 | 91.1° | 44.1° |
| CG | N01 | C5' | H15 | 152.1° | 164.1° |
| O4' | C1' | C2' | H21 | 115.2° | 118.8° |
| O4' | C1' | C2' | O2' | 111.2° | 142.7° |
| O4' | C1' | C2' | C3' | 6.2° | 24.0° |
| C1' | O4' | C4' | C5' | 165.2° | 159.4° |
| C1' | O4' | C4' | C3' | 46.0° | 40.5° |
| C1' | O4' | C4' | H16 | 67.8° | 78.4° |
| O4' | C1' | C2' | H19 | 126.3° | 94.7° |
| C2' | C1' | O4' | C4' | 28.0° | 40.5° |
| C1' | C2' | O2' | C3' | 114.2° | 114.7° |
| C1' | C2' | O2' | H19 | 123.9° | 122.7° |
| C1' | C2' | C3' | H19 | 121.9° | 118.6° |
| C1' | C2' | C3' | C4' | 32.3° | 0.0° |
| C1' | C2' | C3' | O3' | 151.8° | 118.7° |
| C1' | C2' | C3' | H17 | 82.2° | 118.7° |
| C1' | C2' | O2' | H20 | 180.0° | 176.1° |
| O4' | C4' | C3' | C2' | 50.8° | 24.0° |
| O4' | C4' | C5' | C3' | 113.2° | 115.4° |
| O4' | C4' | C5' | H16 | 128.7° | 122.4° |
| O4' | C4' | C3' | H16 | 116.8° | 119.0° |
| O4' | C4' | C5' | N01 | 26.4° | 65.2° |
| O4' | C4' | C3' | O3' | 171.9° | 142.7° |
| O4' | C4' | C5' | H14 | 148.0° | 174.8° |
| O4' | C4' | C5' | H15 | 95.2° | 54.7° |
| O4' | C4' | C3' | H17 | 64.2° | 94.8° |
| C4' | O4' | C1' | H21 | 89.6° | 78.3° |
| O2' | C2' | C3' | H19 | 122.0° | 122.6° |
| O2' | C2' | C3' | C4' | 83.8° | 118.8° |
| O2' | C2' | C3' | O3' | 35.7° | 0.1° |
| O2' | C2' | C3' | H17 | 161.7° | 122.5° |
| O2' | C2' | C1' | H21 | 4.0° | 23.8° |
| C2' | C3' | C4' | C5' | 175.7° | 142.8° |
| C2' | C3' | C4' | O3' | 121.1° | 118.7° |
| C2' | C3' | C4' | H17 | 115.0° | 118.8° |
| C2' | C3' | O3' | H17 | 124.9° | 122.7° |
| C2' | C3' | C4' | H16 | 66.0° | 95.0° |
| C2' | C3' | O3' | H18 | 180.0° | 65.3° |
| C3' | C2' | O2' | H20 | 65.8° | 61.5° |
| C3' | C2' | C1' | H21 | 121.4° | 94.8° |
| C5' | C4' | C3' | H16 | 118.3° | 122.2° |
| C4' | C5' | N01 | H14 | 121.6° | 120.0° |
| C4' | C5' | N01 | H15 | 121.6° | 120.0° |
| C4' | C5' | N01 | CE | 152.6° | 160.1° |
| C5' | C4' | C3' | O3' | 63.2° | 98.5° |
| C4' | C5' | H14 | H15 | 114.9° | 120.0° |
| C5' | C4' | C3' | H17 | 60.7° | 24.0° |
| C3' | C4' | C5' | N01 | 139.6° | 179.4° |
| C4' | C3' | O3' | H17 | 122.4° | 122.6° |
| C3' | C4' | C5' | H14 | 98.8° | 59.3° |
| C3' | C4' | C5' | H15 | 18.0° | 60.7° |
| C4' | C3' | O3' | H18 | 67.3° | 180.0° |
| C4' | C3' | C2' | H19 | 154.2° | 118.6° |
| C5' | N01 | CE | C01 | 142.6° | 72.6° |
| C5' | N01 | CG | H10 | 89.3° | 70.0° |
| C5' | N01 | CG | H11 | 29.8° | 50.0° |
| C5' | N01 | CE | H12 | 97.0° | 47.4° |
| C5' | N01 | CE | H13 | 22.2° | 167.3° |
| N01 | C5' | H14 | H15 | 114.8° | 119.9° |
| N01 | C5' | C4' | H16 | 102.3° | 57.1° |
| N01 | CE | C01 | O01 | 87.7° | 65.4° |
| N01 | CE | C01 | H12 | 120.4° | 120.0° |
| N01 | CE | C01 | H13 | 120.4° | 120.0° |
| CE | N01 | CG | H10 | 29.8° | 54.0° |
| CE | N01 | CG | H11 | 148.9° | 174.0° |
| N01 | CE | H12 | H13 | 118.8° | 119.9° |
| CE | N01 | C5' | H14 | 31.0° | 79.9° |
| CE | N01 | C5' | H15 | 85.8° | 40.1° |
| N01 | CE | C01 | H22 | 33.6° | 174.6° |
| N01 | CE | C01 | H7 | 151.0° | 54.6° |
| O01 | C01 | CE | H22 | 121.3° | 120.0° |
| O01 | C01 | CE | H7 | 121.3° | 120.0° |
| O01 | C01 | CE | H12 | 32.7° | 174.6° |
| O01 | C01 | CE | H13 | 151.9° | 54.6° |
| O01 | C01 | H22 | H7 | 115.8° | 120.0° |
| C01 | CE | H12 | H13 | 118.8° | 120.0° |
| CE | C01 | H22 | H7 | 115.8° | 120.0° |
| CE | C01 | O01 | H23 | 180.0° | 180.0° |
| O3' | C3' | C4' | H16 | 55.1° | 23.7° |
| O3' | C3' | C2' | H19 | 86.3° | 122.7° |
| H3 | N | H4 | H5 | 120.0° | 119.9° |
| H3 | N | CA | H6 | 62.2° | 60.0° |
| H4 | N | CA | H6 | 57.8° | 60.0° |
| H6 | CA | CB | H8 | 110.8° | 175.0° |
| H6 | CA | CB | H9 | 131.2° | 64.9° |
| H6 | CA | N | H5 | 177.8° | 180.0° |
| H8 | CB | CG | H10 | 135.6° | 180.0° |
| H8 | CB | CG | H11 | 105.3° | 60.0° |
| H9 | CB | CG | H10 | 17.6° | 60.0° |
| H9 | CB | CG | H11 | 136.7° | 180.0° |
| H12 | CE | C01 | H22 | 154.0° | 54.6° |
| H12 | CE | C01 | H7 | 88.6° | 65.4° |
| H13 | CE | C01 | H22 | 86.8° | 65.4° |
| H13 | CE | C01 | H7 | 30.6° | 174.6° |
| H14 | C5' | C4' | H16 | 19.3° | 62.9° |
| H15 | C5' | C4' | H16 | 136.1° | 177.1° |
| H16 | C4' | C3' | H17 | 179.0° | 146.2° |
| H17 | C3' | O3' | H18 | 55.1° | 57.4° |
| H17 | C3' | C2' | H19 | 39.6° | 0.1° |
| H19 | C2' | O2' | H20 | 56.1° | 61.2° |
| H19 | C2' | C1' | H21 | 118.5° | 146.5° |
| H22 | C01 | O01 | H23 | 58.7° | 60.0° |
| H7 | C01 | O01 | H23 | 58.7° | 60.0° |
