E7G
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| OP1 | P | doub | 1.48Å | 1.50Å | |
| C72 | C71 | sing | 1.53Å | 1.51Å | |
| P | OP2 | sing | 1.61Å | 1.50Å | |
| P | O5' | sing | 1.61Å | 1.59Å | |
| C71 | N7 | sing | 1.46Å | 1.47Å | |
| O5' | C5' | sing | 1.43Å | 1.42Å | |
| O6 | C6 | doub | 1.22Å | 1.24Å | |
| N7 | C8 | sing | 1.47Å | 1.45Å | |
| N7 | C5 | sing | 1.41Å | 1.33Å | |
| C8 | N9 | sing | 1.47Å | 1.45Å | |
| C5 | C6 | sing | 1.40Å | 1.47Å | |
| C5 | C4 | doub | 1.38Å | 1.46Å | |
| C5' | C4' | sing | 1.53Å | 1.51Å | |
| C6 | N1 | sing | 1.35Å | 1.33Å | |
| N9 | C4 | sing | 1.38Å | 1.33Å | |
| N9 | C1' | sing | 1.47Å | 1.47Å | |
| O4' | C4' | sing | 1.44Å | 1.45Å | |
| O4' | C1' | sing | 1.44Å | 1.41Å | |
| N1 | C2 | sing | 1.36Å | 1.34Å | |
| C4' | C3' | sing | 1.54Å | 1.51Å | |
| C4 | N3 | sing | 1.34Å | 1.35Å | |
| C3' | O3' | sing | 1.43Å | 1.41Å | |
| C3' | C2' | sing | 1.55Å | 1.52Å | |
| C1' | C2' | sing | 1.55Å | 1.53Å | |
| C2 | N3 | doub | 1.31Å | 1.35Å | |
| C2 | N2 | sing | 1.37Å | 1.34Å | |
| C2' | O2' | sing | 1.43Å | 1.41Å | |
| P | OP3 | sing | 1.61Å | 1.60Å | |
| C1' | H1 | sing | 1.09Å | 1.10Å | |
| C2' | H2 | sing | 1.09Å | 1.10Å | |
| C3' | H3 | sing | 1.09Å | 1.10Å | |
| C4' | H4 | sing | 1.09Å | 1.10Å | |
| C5' | H5 | sing | 1.09Å | 1.10Å | |
| C5' | H6 | sing | 1.09Å | 1.10Å | |
| C8 | H7 | sing | 1.09Å | 1.10Å | |
| N2 | H8 | sing | 0.97Å | 1.00Å | |
| N2 | H9 | sing | 0.97Å | 1.00Å | |
| O2' | H11 | sing | 0.97Å | 0.95Å | |
| O3' | H12 | sing | 0.97Å | 0.95Å | |
| OP2 | H13 | sing | 0.97Å | 0.95Å | |
| C71 | H14 | sing | 1.09Å | 1.10Å | |
| C71 | H15 | sing | 1.09Å | 1.10Å | |
| C72 | H16 | sing | 1.09Å | 1.10Å | |
| C72 | H17 | sing | 1.09Å | 1.10Å | |
| C72 | H18 | sing | 1.09Å | 1.10Å | |
| OP3 | H19 | sing | 0.97Å | 0.95Å | |
| C8 | H20 | sing | 1.09Å | 1.10Å | |
| N1 | H21 | sing | 0.97Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP1 | P | OP2 | 120.5° | 109.5° |
| OP1 | P | O5' | 107.4° | 109.5° |
| OP1 | P | OP3 | 107.1° | 109.5° |
| C72 | C71 | N7 | 113.8° | 109.5° |
| C72 | C71 | H14 | 108.4° | 109.4° |
| C72 | C71 | H15 | 108.4° | 109.5° |
| C71 | C72 | H16 | 109.5° | 109.5° |
| C71 | C72 | H17 | 109.5° | 109.5° |
| C71 | C72 | H18 | 109.5° | 109.4° |
| OP2 | P | O5' | 108.1° | 109.5° |
| OP2 | P | OP3 | 108.1° | 109.4° |
| P | OP2 | H13 | 109.5° | 114.0° |
| P | O5' | C5' | 121.0° | 123.0° |
| O5' | P | OP3 | 104.5° | 109.5° |
| C71 | N7 | C8 | 112.9° | 126.6° |
| C71 | N7 | C5 | 131.8° | 126.6° |
| N7 | C71 | H14 | 108.4° | 109.5° |
| N7 | C71 | H15 | 108.4° | 109.5° |
| O5' | C5' | C4' | 112.0° | 109.5° |
| O5' | C5' | H5 | 108.8° | 109.4° |
| O5' | C5' | H6 | 108.8° | 109.5° |
| O6 | C6 | C5 | 123.1° | 120.6° |
| O6 | C6 | N1 | 120.5° | 120.6° |
| C8 | N7 | C5 | 115.2° | 106.7° |
| N7 | C8 | N9 | 96.9° | 105.6° |
| N7 | C8 | H7 | 112.5° | 109.4° |
| N7 | C8 | H20 | 112.5° | 111.2° |
| N7 | C5 | C6 | 134.0° | 131.2° |
| N7 | C5 | C4 | 106.7° | 109.8° |
| C8 | N9 | C4 | 116.8° | 107.8° |
| C8 | N9 | C1' | 115.3° | 126.1° |
| N9 | C8 | H7 | 112.5° | 110.2° |
| N9 | C8 | H20 | 112.5° | 110.3° |
| C6 | C5 | C4 | 119.2° | 119.0° |
| C5 | C6 | N1 | 116.4° | 118.8° |
| C5 | C4 | N9 | 104.3° | 110.1° |
| C5 | C4 | N3 | 117.7° | 119.4° |
| C5' | C4' | O4' | 110.5° | 110.0° |
| C5' | C4' | C3' | 116.3° | 109.9° |
| C5' | C4' | H4 | 108.7° | 109.9° |
| C4' | C5' | H5 | 108.8° | 109.4° |
| C4' | C5' | H6 | 108.8° | 109.5° |
| C6 | N1 | C2 | 122.8° | 120.1° |
| C6 | N1 | H21 | 118.6° | 119.9° |
| C4 | N9 | C1' | 127.9° | 126.1° |
| N9 | C4 | N3 | 138.0° | 130.5° |
| N9 | C1' | O4' | 109.9° | 110.7° |
| N9 | C1' | C2' | 111.6° | 110.6° |
| N9 | C1' | H1 | 109.2° | 110.6° |
| C4' | O4' | C1' | 109.5° | 107.0° |
| O4' | C4' | C3' | 102.9° | 107.3° |
| O4' | C4' | H4 | 109.6° | 109.8° |
| O4' | C1' | C2' | 107.4° | 103.5° |
| O4' | C1' | H1 | 110.1° | 110.6° |
| N1 | C2 | N3 | 123.6° | 121.5° |
| N1 | C2 | N2 | 118.1° | 119.3° |
| C2 | N1 | H21 | 118.6° | 120.0° |
| C4' | C3' | O3' | 113.6° | 110.5° |
| C4' | C3' | C2' | 101.8° | 104.2° |
| C4' | C3' | H3 | 108.6° | 110.6° |
| C3' | C4' | H4 | 108.6° | 109.8° |
| C4 | N3 | C2 | 120.2° | 121.3° |
| O3' | C3' | C2' | 113.9° | 110.5° |
| O3' | C3' | H3 | 110.0° | 110.4° |
| C3' | O3' | H12 | 109.5° | 114.0° |
| C3' | C2' | C1' | 101.0° | 102.1° |
| C3' | C2' | O2' | 110.3° | 110.9° |
| C3' | C2' | H2 | 111.6° | 111.0° |
| C2' | C3' | H3 | 108.6° | 110.5° |
| C1' | C2' | O2' | 108.4° | 110.9° |
| C2' | C1' | H1 | 108.6° | 110.6° |
| C1' | C2' | H2 | 111.5° | 111.0° |
| N3 | C2 | N2 | 118.2° | 119.2° |
| C2 | N2 | H8 | 120.0° | 120.0° |
| C2 | N2 | H9 | 120.0° | 120.0° |
| O2' | C2' | H2 | 113.3° | 110.7° |
| C2' | O2' | H11 | 109.5° | 114.1° |
| P | OP3 | H19 | 109.5° | 114.0° |
| H5 | C5' | H6 | 109.5° | 109.5° |
| H7 | C8 | H20 | 109.5° | 110.2° |
| H8 | N2 | H9 | 120.0° | 120.0° |
| H14 | C71 | H15 | 109.5° | 109.4° |
| H16 | C72 | H17 | 109.5° | 109.4° |
| H16 | C72 | H18 | 109.5° | 109.5° |
| H17 | C72 | H18 | 109.5° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP1 | P | OP2 | O5' | 123.9° | 120.0° |
| OP1 | P | OP2 | OP3 | 123.5° | 120.0° |
| OP1 | P | O5' | OP3 | 113.6° | 120.0° |
| OP1 | P | O5' | C5' | 163.2° | 54.9° |
| OP1 | P | OP2 | H13 | 0.0° | 180.0° |
| OP1 | P | OP3 | H19 | 0.0° | 60.0° |
| C72 | C71 | N7 | H14 | 120.6° | 120.0° |
| C72 | C71 | N7 | H15 | 120.6° | 120.1° |
| C72 | C71 | N7 | C8 | 51.0° | 90.1° |
| C72 | C71 | N7 | C5 | 131.2° | 91.2° |
| C72 | C71 | H14 | H15 | 118.0° | 120.0° |
| C71 | C72 | H16 | H17 | 120.0° | 120.1° |
| C71 | C72 | H16 | H18 | 120.0° | 120.0° |
| C71 | C72 | H17 | H18 | 120.0° | 120.0° |
| OP2 | P | O5' | OP3 | 115.0° | 119.9° |
| OP2 | P | O5' | C5' | 31.7° | 65.1° |
| OP2 | P | OP3 | H19 | 131.2° | 60.0° |
| P | O5' | C5' | C4' | 165.4° | 180.0° |
| P | O5' | C5' | H5 | 74.2° | 60.1° |
| P | O5' | C5' | H6 | 45.0° | 59.9° |
| O5' | P | OP2 | H13 | 123.9° | 59.9° |
| O5' | P | OP3 | H19 | 113.8° | 179.9° |
| C71 | N7 | C8 | C5 | 178.2° | 178.9° |
| C71 | N7 | C8 | N9 | 179.2° | 180.0° |
| C71 | N7 | C5 | C6 | 2.0° | 1.0° |
| C71 | N7 | C5 | C4 | 179.1° | 179.7° |
| C71 | N7 | C8 | H7 | 62.9° | 61.4° |
| N7 | C71 | H14 | H15 | 118.0° | 120.0° |
| N7 | C71 | C72 | H16 | 180.0° | 60.0° |
| N7 | C71 | C72 | H17 | 60.0° | 180.0° |
| N7 | C71 | C72 | H18 | 60.0° | 60.0° |
| C71 | N7 | C8 | H20 | 61.3° | 60.4° |
| O5' | C5' | C4' | H5 | 120.4° | 120.0° |
| O5' | C5' | C4' | H6 | 120.4° | 120.0° |
| O5' | C5' | C4' | O4' | 23.2° | 67.1° |
| O5' | C5' | C4' | C3' | 93.6° | 175.0° |
| C5' | O5' | P | OP3 | 83.3° | 175.0° |
| O5' | C5' | C4' | H4 | 143.4° | 54.0° |
| O5' | C5' | H5 | H6 | 118.9° | 120.0° |
| O6 | C6 | C5 | N7 | 0.6° | 0.8° |
| O6 | C6 | C5 | N1 | 179.6° | 179.2° |
| O6 | C6 | C5 | C4 | 179.3° | 180.0° |
| O6 | C6 | N1 | C2 | 179.7° | 179.7° |
| O6 | C6 | N1 | H21 | 0.3° | 0.3° |
| N7 | C8 | N9 | H7 | 117.9° | 118.0° |
| N7 | C8 | N9 | H20 | 117.9° | 120.2° |
| C8 | N7 | C5 | C6 | 179.8° | 180.0° |
| C8 | N7 | C5 | C4 | 1.3° | 0.7° |
| N7 | C8 | N9 | C4 | 0.3° | 1.0° |
| N7 | C8 | N9 | C1' | 179.2° | 180.0° |
| N7 | C8 | H7 | H20 | 125.9° | 122.5° |
| C8 | N7 | C71 | H14 | 69.6° | 150.0° |
| C8 | N7 | C71 | H15 | 171.6° | 30.0° |
| C5 | N7 | C8 | N9 | 1.0° | 1.1° |
| N7 | C5 | C6 | C4 | 178.7° | 179.2° |
| N7 | C5 | C6 | N1 | 179.0° | 180.0° |
| N7 | C5 | C4 | N9 | 1.0° | 0.1° |
| N7 | C5 | C4 | N3 | 179.8° | 179.9° |
| C5 | N7 | C8 | H7 | 118.9° | 119.6° |
| C5 | N7 | C71 | H14 | 108.2° | 28.8° |
| C5 | N7 | C71 | H15 | 10.6° | 148.7° |
| C5 | N7 | C8 | H20 | 116.9° | 118.5° |
| C8 | N9 | C4 | C5 | 0.4° | 0.6° |
| C8 | N9 | C4 | C1' | 179.4° | 178.9° |
| C8 | N9 | C1' | O4' | 2.2° | 130.9° |
| C8 | N9 | C4 | N3 | 179.3° | 179.4° |
| C8 | N9 | C1' | C2' | 121.2° | 115.0° |
| C8 | N9 | C1' | H1 | 118.7° | 8.0° |
| N9 | C8 | H7 | H20 | 125.9° | 121.9° |
| C6 | C5 | C4 | N9 | 179.9° | 179.5° |
| C5 | C6 | N1 | C2 | 0.1° | 0.6° |
| C6 | C5 | C4 | N3 | 0.8° | 0.5° |
| C5 | C6 | N1 | H21 | 179.9° | 179.4° |
| C4 | C5 | C6 | N1 | 0.3° | 0.8° |
| C5 | C4 | N9 | N3 | 178.9° | 180.0° |
| C5 | C4 | N9 | C1' | 179.9° | 179.6° |
| C5 | C4 | N3 | C2 | 0.8° | 0.1° |
| C5' | C4' | O4' | C3' | 124.8° | 119.5° |
| C5' | C4' | O4' | H4 | 119.8° | 121.1° |
| C5' | C4' | O4' | C1' | 151.2° | 146.0° |
| C5' | C4' | C3' | H4 | 123.0° | 121.0° |
| C5' | C4' | C3' | O3' | 76.0° | 119.7° |
| C5' | C4' | C3' | C2' | 161.2° | 121.6° |
| C5' | C4' | C3' | H3 | 46.7° | 2.9° |
| C4' | C5' | H5 | H6 | 118.8° | 120.0° |
| C6 | N1 | C2 | H21 | 180.0° | 180.0° |
| C6 | N1 | C2 | N3 | 0.0° | 0.1° |
| C6 | N1 | C2 | N2 | 179.9° | 179.7° |
| C4 | N9 | C1' | O4' | 177.2° | 50.4° |
| C4 | N9 | C1' | C2' | 58.2° | 63.8° |
| N9 | C4 | N3 | C2 | 179.6° | 179.9° |
| C4 | N9 | C1' | H1 | 61.8° | 173.3° |
| C4 | N9 | C8 | H7 | 118.2° | 119.0° |
| C4 | N9 | C8 | H20 | 117.6° | 119.1° |
| N9 | C1' | O4' | C4' | 123.2° | 158.6° |
| N9 | C1' | O4' | C2' | 121.6° | 118.6° |
| N9 | C1' | O4' | H1 | 120.4° | 122.9° |
| C1' | N9 | C4 | N3 | 1.2° | 0.4° |
| N9 | C1' | C2' | C3' | 97.0° | 155.7° |
| N9 | C1' | C2' | H1 | 120.5° | 122.9° |
| N9 | C1' | C2' | O2' | 147.1° | 86.2° |
| N9 | C1' | C2' | H2 | 21.7° | 37.4° |
| C1' | N9 | C8 | H7 | 61.3° | 62.0° |
| C1' | N9 | C8 | H20 | 62.9° | 59.8° |
| O4' | C4' | C3' | H4 | 116.1° | 119.4° |
| O4' | C4' | C3' | O3' | 163.1° | 120.7° |
| O4' | C4' | C3' | C2' | 40.3° | 2.0° |
| C4' | O4' | C1' | C2' | 1.6° | 40.0° |
| C4' | O4' | C1' | H1 | 116.4° | 78.4° |
| O4' | C4' | C3' | H3 | 74.2° | 116.7° |
| O4' | C4' | C5' | H5 | 143.5° | 172.9° |
| O4' | C4' | C5' | H6 | 97.2° | 52.9° |
| C1' | O4' | C4' | C3' | 26.3° | 26.5° |
| O4' | C1' | C2' | C3' | 23.5° | 37.0° |
| O4' | C1' | C2' | H1 | 119.0° | 118.5° |
| O4' | C1' | C2' | O2' | 92.4° | 155.2° |
| O4' | C1' | C2' | H2 | 142.2° | 81.2° |
| C1' | O4' | C4' | H4 | 89.1° | 92.9° |
| N1 | C2 | N3 | C4 | 0.5° | 0.2° |
| N1 | C2 | N3 | N2 | 179.9° | 179.8° |
| N1 | C2 | N2 | H8 | 179.9° | 179.7° |
| N1 | C2 | N2 | H9 | 0.1° | 0.2° |
| C4' | C3' | O3' | C2' | 115.9° | 114.8° |
| C4' | C3' | O3' | H3 | 122.0° | 122.7° |
| C4' | C3' | C2' | H3 | 114.5° | 118.8° |
| C4' | C3' | C2' | C1' | 38.3° | 20.9° |
| C4' | C3' | C2' | O2' | 76.1° | 139.1° |
| C4' | C3' | C2' | H2 | 157.0° | 97.4° |
| C3' | C4' | C5' | H5 | 26.7° | 55.0° |
| C3' | C4' | C5' | H6 | 146.0° | 65.0° |
| C4' | C3' | O3' | H12 | 180.0° | 176.2° |
| C4 | N3 | C2 | N2 | 179.6° | 180.0° |
| O3' | C3' | C2' | H3 | 122.9° | 122.5° |
| O3' | C3' | C2' | C1' | 161.0° | 97.8° |
| O3' | C3' | C2' | O2' | 46.5° | 20.4° |
| O3' | C3' | C2' | H2 | 80.4° | 143.9° |
| O3' | C3' | C4' | H4 | 47.0° | 1.3° |
| C3' | C2' | C1' | O2' | 115.9° | 118.2° |
| C3' | C2' | C1' | H2 | 118.7° | 118.3° |
| C3' | C2' | O2' | H2 | 125.9° | 123.6° |
| C3' | C2' | C1' | H1 | 142.5° | 81.4° |
| C2' | C3' | C4' | H4 | 75.8° | 117.4° |
| C3' | C2' | O2' | H11 | 180.0° | 67.3° |
| C2' | C3' | O3' | H12 | 64.1° | 61.5° |
| C1' | C2' | O2' | H2 | 124.4° | 123.7° |
| C1' | C2' | C3' | H3 | 76.1° | 139.7° |
| C1' | C2' | O2' | H11 | 70.3° | 180.0° |
| N3 | C2 | N2 | H8 | 0.0° | 0.1° |
| N3 | C2 | N2 | H9 | 180.0° | 180.0° |
| N3 | C2 | N1 | H21 | 180.0° | 179.9° |
| C2 | N2 | H8 | H9 | 180.0° | 179.9° |
| N2 | C2 | N1 | H21 | 0.1° | 0.3° |
| O2' | C2' | C1' | H1 | 26.7° | 36.8° |
| O2' | C2' | C3' | H3 | 169.4° | 102.1° |
| OP3 | P | OP2 | H13 | 123.5° | 60.0° |
| H1 | C1' | C2' | H2 | 98.8° | 160.3° |
| H2 | C2' | C3' | H3 | 42.5° | 21.4° |
| H2 | C2' | O2' | H11 | 54.1° | 56.3° |
| H3 | C3' | C4' | H4 | 169.7° | 123.9° |
| H3 | C3' | O3' | H12 | 58.0° | 61.1° |
| H4 | C4' | C5' | H5 | 96.2° | 66.0° |
| H4 | C4' | C5' | H6 | 23.1° | 174.0° |
| H14 | C71 | C72 | H16 | 59.4° | 60.0° |
| H14 | C71 | C72 | H17 | 60.7° | 60.0° |
| H14 | C71 | C72 | H18 | 179.4° | 180.0° |
| H15 | C71 | C72 | H16 | 59.3° | 179.9° |
| H15 | C71 | C72 | H17 | 179.4° | 59.9° |
| H15 | C71 | C72 | H18 | 60.6° | 60.0° |
| H16 | C72 | H17 | H18 | 120.0° | 120.0° |
