E6G
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O3' | C3' | sing | 1.43Å | 1.41Å | |
| C5' | C4' | sing | 1.53Å | 1.50Å | |
| C5' | O5' | sing | 1.43Å | 1.41Å | |
| C4' | C3' | sing | 1.54Å | 1.51Å | |
| C4' | O4' | sing | 1.44Å | 1.45Å | |
| O2' | C2' | sing | 1.43Å | 1.42Å | |
| C3' | C2' | sing | 1.55Å | 1.51Å | |
| OP1 | P | doub | 1.48Å | 1.50Å | |
| O5' | P | sing | 1.61Å | 1.58Å | |
| C2' | C1' | sing | 1.55Å | 1.52Å | |
| P | OP2 | sing | 1.61Å | 1.50Å | |
| O4' | C1' | sing | 1.44Å | 1.41Å | |
| C1' | N9 | sing | 1.47Å | 1.47Å | |
| N9 | C8 | sing | 1.36Å | 1.34Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.32Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.34Å | Aromatic |
| C4 | N3 | doub | 1.33Å | 1.34Å | Aromatic |
| C4 | C5 | sing | 1.41Å | 1.46Å | Aromatic |
| N3 | C2 | sing | 1.32Å | 1.35Å | Aromatic |
| N7 | C5 | sing | 1.36Å | 1.34Å | Aromatic |
| C5 | C6 | doub | 1.40Å | 1.47Å | Aromatic |
| C2 | N2 | sing | 1.39Å | 1.35Å | |
| C2 | N1 | doub | 1.33Å | 1.35Å | Aromatic |
| C6 | N1 | sing | 1.33Å | 1.34Å | Aromatic |
| C6 | O6 | sing | 1.35Å | 1.37Å | |
| C61 | O6 | sing | 1.43Å | 1.43Å | |
| C61 | C62 | sing | 1.53Å | 1.51Å | |
| C1' | H1 | sing | 1.09Å | 1.10Å | |
| C2' | H2 | sing | 1.09Å | 1.10Å | |
| C3' | H3 | sing | 1.09Å | 1.10Å | |
| C4' | H4 | sing | 1.09Å | 1.10Å | |
| C5' | H5 | sing | 1.09Å | 1.10Å | |
| C5' | H6 | sing | 1.09Å | 1.10Å | |
| C8 | H7 | sing | 1.08Å | 1.08Å | |
| N2 | H8 | sing | 0.97Å | 1.00Å | |
| N2 | H9 | sing | 0.97Å | 1.00Å | |
| O2' | H10 | sing | 0.97Å | 0.95Å | |
| O3' | H11 | sing | 0.97Å | 0.95Å | |
| OP2 | H13 | sing | 0.97Å | 0.95Å | |
| C61 | H14 | sing | 1.09Å | 1.10Å | |
| C61 | H15 | sing | 1.09Å | 1.10Å | |
| C62 | H16 | sing | 1.09Å | 1.10Å | |
| C62 | H17 | sing | 1.09Å | 1.10Å | |
| C62 | H18 | sing | 1.09Å | 1.10Å | |
| P | OP3 | sing | 1.61Å | 1.60Å | |
| OP3 | H12 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O3' | C3' | C4' | 114.6° | 110.6° |
| O3' | C3' | C2' | 114.4° | 110.5° |
| O3' | C3' | H3 | 109.5° | 110.4° |
| C3' | O3' | H11 | 109.5° | 114.1° |
| C4' | C5' | O5' | 110.7° | 109.5° |
| C5' | C4' | C3' | 116.4° | 109.9° |
| C5' | C4' | O4' | 109.6° | 110.0° |
| C5' | C4' | H4 | 109.0° | 110.0° |
| C4' | C5' | H5 | 109.2° | 109.5° |
| C4' | C5' | H6 | 109.2° | 109.5° |
| C5' | O5' | P | 121.8° | 123.0° |
| O5' | C5' | H5 | 109.2° | 109.5° |
| O5' | C5' | H6 | 109.1° | 109.4° |
| C3' | C4' | O4' | 103.1° | 107.3° |
| C4' | C3' | C2' | 101.8° | 104.2° |
| C4' | C3' | H3 | 108.1° | 110.5° |
| C3' | C4' | H4 | 108.9° | 109.9° |
| C4' | O4' | C1' | 109.7° | 106.9° |
| O4' | C4' | H4 | 109.7° | 109.7° |
| O2' | C2' | C3' | 110.5° | 111.0° |
| O2' | C2' | C1' | 108.4° | 110.9° |
| O2' | C2' | H2 | 113.5° | 110.8° |
| C2' | O2' | H10 | 109.5° | 114.0° |
| C3' | C2' | C1' | 99.9° | 102.1° |
| C3' | C2' | H2 | 111.9° | 110.9° |
| C2' | C3' | H3 | 108.1° | 110.5° |
| OP1 | P | O5' | 107.7° | 109.5° |
| OP1 | P | OP2 | 120.8° | 109.5° |
| OP1 | P | OP3 | 109.8° | 109.5° |
| O5' | P | OP2 | 106.3° | 109.5° |
| O5' | P | OP3 | 104.9° | 109.5° |
| C2' | C1' | O4' | 106.7° | 103.6° |
| C2' | C1' | N9 | 110.6° | 110.6° |
| C2' | C1' | H1 | 109.6° | 110.6° |
| C1' | C2' | H2 | 111.8° | 110.9° |
| P | OP2 | H13 | 109.5° | 114.0° |
| OP2 | P | OP3 | 106.2° | 109.5° |
| O4' | C1' | N9 | 108.3° | 110.6° |
| O4' | C1' | H1 | 111.2° | 110.6° |
| C1' | N9 | C8 | 126.5° | 126.3° |
| C1' | N9 | C4 | 125.2° | 126.2° |
| N9 | C1' | H1 | 110.3° | 110.6° |
| C8 | N9 | C4 | 108.2° | 107.4° |
| N9 | C8 | N7 | 111.6° | 110.0° |
| N9 | C8 | H7 | 124.2° | 125.0° |
| N9 | C4 | N3 | 134.6° | 134.8° |
| N9 | C4 | C5 | 106.4° | 106.0° |
| C8 | N7 | C5 | 107.0° | 109.4° |
| N7 | C8 | H7 | 124.2° | 125.0° |
| N3 | C4 | C5 | 119.1° | 119.1° |
| C4 | N3 | C2 | 120.6° | 120.5° |
| C4 | C5 | N7 | 106.8° | 107.1° |
| C4 | C5 | C6 | 117.7° | 118.3° |
| N3 | C2 | N2 | 118.1° | 118.9° |
| N3 | C2 | N1 | 123.1° | 122.2° |
| N7 | C5 | C6 | 135.5° | 134.6° |
| C5 | C6 | N1 | 117.4° | 118.6° |
| C5 | C6 | O6 | 120.5° | 120.7° |
| N2 | C2 | N1 | 118.8° | 118.9° |
| C2 | N2 | H8 | 109.5° | 119.9° |
| C2 | N2 | H9 | 109.5° | 120.0° |
| C2 | N1 | C6 | 122.0° | 121.2° |
| N1 | C6 | O6 | 122.0° | 120.7° |
| C6 | O6 | C61 | 120.6° | 117.0° |
| O6 | C61 | C62 | 109.6° | 109.5° |
| O6 | C61 | H14 | 109.5° | 109.4° |
| O6 | C61 | H15 | 109.4° | 109.5° |
| C62 | C61 | H14 | 109.4° | 109.5° |
| C62 | C61 | H15 | 109.4° | 109.5° |
| C61 | C62 | H16 | 109.5° | 109.5° |
| C61 | C62 | H17 | 109.5° | 109.5° |
| C61 | C62 | H18 | 109.4° | 109.4° |
| H5 | C5' | H6 | 109.5° | 109.5° |
| H8 | N2 | H9 | 109.4° | 120.0° |
| H14 | C61 | H15 | 109.5° | 109.5° |
| H16 | C62 | H17 | 109.4° | 109.5° |
| H16 | C62 | H18 | 109.5° | 109.4° |
| H17 | C62 | H18 | 109.5° | 109.5° |
| P | OP3 | H12 | 109.5° | 114.1° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O3' | C3' | C4' | C5' | 78.1° | 119.8° |
| O3' | C3' | C4' | C2' | 124.0° | 118.7° |
| O3' | C3' | C4' | H3 | 122.3° | 122.6° |
| O3' | C3' | C4' | O4' | 162.0° | 120.6° |
| O3' | C3' | C2' | O2' | 52.2° | 20.3° |
| O3' | C3' | C2' | H3 | 122.2° | 122.5° |
| O3' | C3' | C2' | C1' | 166.2° | 98.0° |
| O3' | C3' | C2' | H2 | 75.3° | 143.8° |
| O3' | C3' | C4' | H4 | 45.5° | 1.4° |
| C4' | C5' | O5' | H5 | 120.2° | 120.1° |
| C4' | C5' | O5' | H6 | 120.2° | 120.0° |
| C5' | C4' | C3' | O4' | 120.0° | 119.6° |
| C5' | C4' | C3' | H4 | 123.6° | 121.1° |
| C5' | C4' | O4' | H4 | 119.6° | 121.1° |
| C5' | C4' | C3' | C2' | 158.0° | 121.5° |
| C4' | C5' | O5' | P | 178.7° | 180.0° |
| C5' | C4' | O4' | C1' | 142.9° | 145.8° |
| C5' | C4' | C3' | H3 | 44.3° | 2.8° |
| C4' | C5' | H5 | H6 | 119.5° | 120.0° |
| O5' | C5' | C4' | C3' | 62.9° | 175.0° |
| O5' | C5' | C4' | O4' | 53.5° | 67.0° |
| C5' | O5' | P | OP1 | 58.2° | 55.0° |
| C5' | O5' | P | OP2 | 171.0° | 65.0° |
| O5' | C5' | C4' | H4 | 173.6° | 53.9° |
| O5' | C5' | H5 | H6 | 119.4° | 120.0° |
| C5' | O5' | P | OP3 | 58.7° | 175.0° |
| C3' | C4' | O4' | H4 | 115.9° | 119.4° |
| C4' | C3' | C2' | O2' | 72.0° | 139.1° |
| C4' | C3' | C2' | H3 | 113.7° | 118.7° |
| C4' | C3' | C2' | C1' | 42.0° | 20.9° |
| C3' | C4' | O4' | C1' | 18.4° | 26.3° |
| C4' | C3' | C2' | H2 | 160.5° | 97.3° |
| C3' | C4' | C5' | H5 | 176.9° | 55.0° |
| C3' | C4' | C5' | H6 | 57.2° | 65.0° |
| C4' | C3' | O3' | H11 | 180.0° | 176.3° |
| O4' | C4' | C3' | C2' | 38.0° | 1.9° |
| C4' | O4' | C1' | C2' | 8.7° | 39.9° |
| C4' | O4' | C1' | N9 | 110.4° | 158.4° |
| C4' | O4' | C1' | H1 | 128.2° | 78.7° |
| O4' | C4' | C3' | H3 | 75.7° | 116.8° |
| O4' | C4' | C5' | H5 | 66.7° | 172.9° |
| O4' | C4' | C5' | H6 | 173.6° | 52.9° |
| O2' | C2' | C3' | C1' | 114.0° | 118.2° |
| O2' | C2' | C3' | H2 | 127.5° | 123.6° |
| O2' | C2' | C1' | H2 | 125.8° | 123.5° |
| O2' | C2' | C1' | O4' | 83.7° | 155.2° |
| O2' | C2' | C1' | N9 | 158.8° | 86.3° |
| O2' | C2' | C1' | H1 | 36.8° | 36.6° |
| O2' | C2' | C3' | H3 | 174.3° | 102.2° |
| C3' | C2' | C1' | H2 | 118.6° | 118.2° |
| C3' | C2' | C1' | O4' | 31.9° | 36.9° |
| C3' | C2' | C1' | N9 | 85.6° | 155.5° |
| C3' | C2' | C1' | H1 | 152.4° | 81.6° |
| C2' | C3' | C4' | H4 | 78.5° | 117.4° |
| C3' | C2' | O2' | H10 | 180.0° | 67.3° |
| C2' | C3' | O3' | H11 | 63.0° | 61.5° |
| OP1 | P | O5' | OP2 | 130.8° | 120.0° |
| OP1 | P | O5' | OP3 | 116.9° | 120.0° |
| OP1 | P | OP2 | OP3 | 125.8° | 120.0° |
| OP1 | P | OP2 | H13 | 0.0° | 180.0° |
| OP1 | P | OP3 | H12 | 0.0° | 59.9° |
| O5' | P | OP2 | OP3 | 111.3° | 120.0° |
| P | O5' | C5' | H5 | 61.2° | 60.0° |
| P | O5' | C5' | H6 | 58.5° | 60.0° |
| O5' | P | OP2 | H13 | 122.9° | 60.0° |
| O5' | P | OP3 | H12 | 115.5° | 179.9° |
| C2' | C1' | O4' | N9 | 119.1° | 118.6° |
| C2' | C1' | O4' | H1 | 119.5° | 118.6° |
| C2' | C1' | N9 | H1 | 121.5° | 122.9° |
| C2' | C1' | N9 | C8 | 109.4° | 92.9° |
| C2' | C1' | N9 | C4 | 68.6° | 87.2° |
| C1' | C2' | C3' | H3 | 71.6° | 139.6° |
| C1' | C2' | O2' | H10 | 71.5° | 180.0° |
| OP2 | P | OP3 | H12 | 132.2° | 60.1° |
| O4' | C1' | N9 | H1 | 121.9° | 122.9° |
| O4' | C1' | N9 | C8 | 7.2° | 21.3° |
| O4' | C1' | N9 | C4 | 174.8° | 158.6° |
| O4' | C1' | C2' | H2 | 150.5° | 81.2° |
| C1' | O4' | C4' | H4 | 97.4° | 93.1° |
| C1' | N9 | C8 | C4 | 178.3° | 180.0° |
| C1' | N9 | C8 | N7 | 178.5° | 180.0° |
| C1' | N9 | C4 | N3 | 1.8° | 0.0° |
| C1' | N9 | C4 | C5 | 178.6° | 180.0° |
| N9 | C1' | C2' | H2 | 32.9° | 37.3° |
| C1' | N9 | C8 | H7 | 1.5° | 0.1° |
| N9 | C8 | N7 | H7 | 180.0° | 179.9° |
| C8 | N9 | C4 | N3 | 179.9° | 180.0° |
| C8 | N9 | C4 | C5 | 0.3° | 0.1° |
| N9 | C8 | N7 | C5 | 0.1° | 0.0° |
| C8 | N9 | C1' | H1 | 129.1° | 144.2° |
| C4 | N9 | C8 | N7 | 0.2° | 0.0° |
| N9 | C4 | N3 | C5 | 179.6° | 180.0° |
| N9 | C4 | N3 | C2 | 179.9° | 180.0° |
| N9 | C4 | C5 | N7 | 0.2° | 0.1° |
| N9 | C4 | C5 | C6 | 179.7° | 179.7° |
| C4 | N9 | C1' | H1 | 52.9° | 35.7° |
| C4 | N9 | C8 | H7 | 179.8° | 180.0° |
| C8 | N7 | C5 | C4 | 0.1° | 0.1° |
| C8 | N7 | C5 | C6 | 179.8° | 179.7° |
| N3 | C4 | C5 | N7 | 179.9° | 180.0° |
| N3 | C4 | C5 | C6 | 0.0° | 0.2° |
| C4 | N3 | C2 | N2 | 179.9° | 180.0° |
| C4 | N3 | C2 | N1 | 0.8° | 0.2° |
| C5 | C4 | N3 | C2 | 0.3° | 0.0° |
| C4 | C5 | N7 | C6 | 179.9° | 179.7° |
| C4 | C5 | C6 | N1 | 0.2° | 0.3° |
| C4 | C5 | C6 | O6 | 179.6° | 180.0° |
| N3 | C2 | N2 | N1 | 179.3° | 179.8° |
| N3 | C2 | N1 | C6 | 1.0° | 0.2° |
| N3 | C2 | N2 | H8 | 0.0° | 179.8° |
| N3 | C2 | N2 | H9 | 120.0° | 0.2° |
| N7 | C5 | C6 | N1 | 179.7° | 180.0° |
| N7 | C5 | C6 | O6 | 0.3° | 0.3° |
| C5 | N7 | C8 | H7 | 179.9° | 179.9° |
| C5 | C6 | N1 | C2 | 0.7° | 0.1° |
| C5 | C6 | N1 | O6 | 179.5° | 179.7° |
| C5 | C6 | O6 | C61 | 62.0° | 180.0° |
| N2 | C2 | N1 | C6 | 179.7° | 180.0° |
| C2 | N2 | H8 | H9 | 120.0° | 180.0° |
| C2 | N1 | C6 | O6 | 179.9° | 179.7° |
| N1 | C2 | N2 | H8 | 179.3° | 0.0° |
| N1 | C2 | N2 | H9 | 59.3° | 180.0° |
| N1 | C6 | O6 | C61 | 118.6° | 0.3° |
| C6 | O6 | C61 | C62 | 155.6° | 180.0° |
| C6 | O6 | C61 | H14 | 35.5° | 60.0° |
| C6 | O6 | C61 | H15 | 84.4° | 60.0° |
| O6 | C61 | C62 | H14 | 120.0° | 120.0° |
| O6 | C61 | C62 | H15 | 120.0° | 120.0° |
| O6 | C61 | H14 | H15 | 119.9° | 120.0° |
| O6 | C61 | C62 | H16 | 180.0° | 60.0° |
| O6 | C61 | C62 | H17 | 60.0° | 60.0° |
| O6 | C61 | C62 | H18 | 60.0° | 180.0° |
| C62 | C61 | H14 | H15 | 119.9° | 120.0° |
| C61 | C62 | H16 | H17 | 120.0° | 120.0° |
| C61 | C62 | H16 | H18 | 120.0° | 119.9° |
| C61 | C62 | H17 | H18 | 120.0° | 120.0° |
| H1 | C1' | C2' | H2 | 89.0° | 160.2° |
| H2 | C2' | C3' | H3 | 46.8° | 21.4° |
| H2 | C2' | O2' | H10 | 53.4° | 56.3° |
| H3 | C3' | C4' | H4 | 167.8° | 123.9° |
| H3 | C3' | O3' | H11 | 58.4° | 61.1° |
| H4 | C4' | C5' | H5 | 53.4° | 66.1° |
| H4 | C4' | C5' | H6 | 66.3° | 173.9° |
| H13 | OP2 | P | OP3 | 125.7° | 60.0° |
| H14 | C61 | C62 | H16 | 60.0° | 180.0° |
| H14 | C61 | C62 | H17 | 179.9° | 60.0° |
| H14 | C61 | C62 | H18 | 60.0° | 60.1° |
| H15 | C61 | C62 | H16 | 60.0° | 60.0° |
| H15 | C61 | C62 | H17 | 60.0° | 180.0° |
| H15 | C61 | C62 | H18 | 180.0° | 59.9° |
| H16 | C62 | H17 | H18 | 120.0° | 120.0° |
