Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

E6B

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C12N4doub1.31Å1.32ÅAromatic
C12N3sing1.35Å1.34ÅAromatic
N4C10sing1.34Å1.38ÅAromatic
N3C11sing1.37Å1.37ÅAromatic
C10C11doub1.35Å1.36ÅAromatic
C10C9sing1.51Å1.49Å
O3C7doub1.22Å1.24Å
C9C8sing1.53Å1.52Å
C7N2sing1.35Å1.34Å
C7C4sing1.48Å1.50Å
C5C6doub1.38Å1.38ÅAromatic
C5C4sing1.40Å1.39ÅAromatic
C8N2sing1.47Å1.46Å
C6C1sing1.38Å1.38ÅAromatic
C4C3doub1.40Å1.39ÅAromatic
O2S1doub1.42Å1.44Å
C1C2doub1.38Å1.38ÅAromatic
C1S1sing1.76Å1.76Å
C3C2sing1.38Å1.38ÅAromatic
S1O1doub1.42Å1.43Å
S1N1sing1.66Å1.60Å
C2H1sing1.08Å1.08Å
C3H2sing1.08Å1.08Å
C5H3sing1.08Å1.08Å
C6H4sing1.08Å1.08Å
C8H5sing1.09Å1.10Å
C8H6sing1.09Å1.10Å
C9H7sing1.09Å1.10Å
C9H8sing1.09Å1.10Å
C11H9sing1.08Å1.08Å
C12H10sing1.08Å1.08Å
N1H11sing0.97Å1.00Å
N1H12sing0.97Å1.00Å
N2H13sing0.97Å1.00Å
N3H14sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N4C12N3111.9°108.7°
C12N4C10104.9°109.3°
N4C12H10124.1°125.6°
C12N3C11107.6°107.2°
N3C12H10124.0°125.7°
C12N3H14126.2°126.4°
N4C10C11110.1°108.0°
N4C10C9120.6°126.0°
N3C11C10105.5°106.8°
N3C11H9127.2°126.6°
C11N3H14126.2°126.3°
C11C10C9129.3°126.0°
C10C11H9127.3°126.6°
C10C9C8111.0°109.4°
C10C9H7109.1°109.5°
C10C9H8109.1°109.5°
O3C7N2122.2°120.0°
O3C7C4120.4°120.0°
C9C8N2111.7°109.5°
C9C8H5108.9°109.4°
C9C8H6108.9°109.5°
C8C9H7109.1°109.5°
C8C9H8109.1°109.5°
N2C7C4117.4°120.0°
C7N2C8122.3°120.0°
C7N2H13118.9°120.0°
C7C4C5118.5°120.2°
C7C4C3122.5°120.1°
C6C5C4120.9°119.9°
C5C6C1119.1°120.2°
C6C5H3119.6°120.0°
C5C6H4120.4°119.9°
C5C4C3119.1°119.7°
C4C5H3119.5°120.1°
N2C8H5108.9°109.5°
N2C8H6108.9°109.5°
C8N2H13118.9°120.0°
C6C1C2120.9°120.3°
C6C1S1119.9°119.9°
C1C6H4120.4°119.9°
C4C3C2120.5°119.8°
C4C3H2119.8°120.1°
O2S1C1107.7°106.4°
O2S1O1117.5°123.2°
O2S1N1108.2°106.4°
C2C1S1119.2°119.8°
C1C2C3119.5°120.1°
C1C2H1120.3°119.9°
C1S1O1104.2°106.4°
C1S1N1107.8°107.2°
C3C2H1120.2°119.9°
C2C3H2119.7°120.1°
O1S1N1111.0°106.5°
S1N1H11109.5°120.0°
S1N1H12109.4°120.0°
H5C8H6109.4°109.5°
H7C9H8109.5°109.5°
H11N1H12109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N4C12N3H10180.0°179.5°
N4C12N3C110.0°0.3°
C12N4C10C110.1°0.4°
C12N4C10C9178.3°179.8°
N4C12N3H14180.0°179.9°
N3C12N4C100.1°0.5°
C12N3C11H14180.0°179.6°
C12N3C11C100.1°0.0°
C12N3C11H9179.9°180.0°
N4C10C11N30.1°0.2°
N4C10C11C9178.3°179.7°
N4C10C9C8121.9°55.3°
N4C10C9H7117.9°175.3°
N4C10C9H81.7°64.7°
N4C10C11H9179.9°179.7°
C10N4C12H10179.9°180.0°
N3C11C10H9180.0°180.0°
N3C11C10C9178.1°180.0°
C11N3C12H10180.0°179.8°
C11C10C9C856.2°125.0°
C11C10C9H764.0°5.0°
C11C10C9H8176.4°115.0°
C10C11N3H14179.9°179.7°
C10C9C8H7120.2°120.0°
C10C9C8H8120.2°120.0°
C10C9C8N2166.4°180.0°
C10C9C8H546.1°60.0°
C10C9C8H673.2°60.0°
C10C9H7H8119.3°120.0°
C9C10C11H91.9°0.0°
O3C7N2C4178.2°180.0°
O3C7C4C59.4°180.0°
O3C7N2C812.4°0.0°
O3C7C4C3171.2°0.0°
O3C7N2H13167.7°180.0°
C9C8N2C763.0°180.0°
C9C8N2H5120.3°120.0°
C9C8N2H6120.4°120.1°
C9C8H5H6119.0°120.0°
C8C9H7H8119.3°120.0°
C9C8N2H13117.0°0.0°
N2C7C4C5172.4°0.0°
C7N2C8H13180.0°179.9°
N2C7C4C37.1°180.0°
C7N2C8H557.3°60.1°
C7N2C8H6176.6°59.9°
C7C4C5C6179.6°179.7°
C7C4C5C3179.5°180.0°
C4C7N2C8165.8°180.0°
C7C4C3C2179.8°180.0°
C7C4C3H20.2°0.0°
C7C4C5H30.4°0.3°
C4C7N2H1314.1°0.0°
C6C5C4H3180.0°179.4°
C5C6C1H4180.0°179.5°
C6C5C4C30.1°0.3°
C5C6C1C20.1°0.5°
C5C6C1S1177.5°179.7°
C4C5C6C10.3°0.5°
C5C4C3C20.7°0.0°
C5C4C3H2179.3°180.0°
C4C5C6H4179.7°180.0°
N2C8H5H6119.0°120.0°
N2C8C9H773.4°60.0°
N2C8C9H846.2°60.0°
C6C1S1O216.4°156.2°
C6C1C2S1177.7°179.8°
C6C1C2C30.4°0.2°
C6C1S1O1109.1°23.3°
C6C1S1N1132.9°90.3°
C6C1C2H1179.5°179.8°
C1C6C5H3179.7°180.0°
C4C3C2C10.9°0.0°
C4C3C2H2180.0°179.9°
C4C3C2H1179.1°180.0°
C3C4C5H3179.9°179.7°
O2S1C1C2165.9°23.5°
O2S1C1O1125.5°132.9°
O2S1C1N1116.5°113.5°
O2S1O1N1125.2°123.0°
O2S1N1H11180.0°113.6°
O2S1N1H1260.0°66.5°
C1C2C3H1180.0°180.0°
C2C1S1O168.6°156.5°
C2C1S1N149.4°90.0°
C1C2C3H2179.1°180.0°
C2C1C6H4179.9°180.0°
S1C1C2C3178.1°180.0°
C1S1O1N1115.7°114.1°
S1C1C2H11.9°0.0°
S1C1C6H42.4°0.2°
C1S1N1H1163.8°0.1°
C1S1N1H12176.2°180.0°
O1S1N1H1149.7°113.4°
O1S1N1H1270.3°66.5°
S1N1H11H12120.0°179.9°
H1C2C3H20.9°0.0°
H3C5C6H40.3°0.5°
H5C8C9H7166.3°60.0°
H5C8C9H874.2°180.0°
H5C8N2H13122.7°120.0°
H6C8C9H747.0°179.9°
H6C8C9H8166.5°60.0°
H6C8N2H133.4°120.0°
H9C11N3H140.1°0.4°
H10C12N3H140.0°0.5°

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon