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SummaryGeometryRelated PDB entries

E5X

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
OAACAJsing1.43Å1.43Å
CAJCADsing1.51Å1.39Å
CAFCAHdoub1.38Å1.39ÅAromatic
CAFCADsing1.38Å1.39ÅAromatic
CAHCAEsing1.40Å1.39ÅAromatic
CADCAGdoub1.38Å1.39ÅAromatic
OACCAKdoub1.21Å1.25Å
CAECAKsing1.48Å1.39Å
CAECAIdoub1.40Å1.39ÅAromatic
CAGCAIsing1.38Å1.39ÅAromatic
CAKOABsing1.35Å1.25Å
CAFH1sing1.08Å1.08Å
CAGH2sing1.08Å1.08Å
CAHH3sing1.08Å1.08Å
CAIH4sing1.08Å1.08Å
CAJH5sing1.09Å1.10Å
CAJH6sing1.09Å1.10Å
OAAH7sing0.97Å0.95Å
OABH8sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
OAACAJCAD108.5°109.5°
OAACAJH5109.7°109.5°
OAACAJH6109.7°109.5°
CAJOAAH7109.5°114.0°
CAJCADCAF119.2°119.9°
CAJCADCAG120.6°119.8°
CADCAJH5109.7°109.4°
CADCAJH6109.7°109.5°
CAHCAFCAD120.0°120.1°
CAFCAHCAE120.0°119.9°
CAHCAFH1120.0°119.9°
CAFCAHH3120.0°120.1°
CAFCADCAG120.2°120.3°
CADCAFH1120.0°120.0°
CAHCAECAK119.2°120.2°
CAHCAECAI120.1°119.7°
CAECAHH3120.0°120.1°
CADCAGCAI119.7°120.1°
CADCAGH2120.1°120.0°
OACCAKCAE119.8°120.0°
OACCAKOAB120.1°120.0°
CAKCAECAI120.7°120.2°
CAECAKOAB120.1°120.0°
CAECAICAG120.0°119.8°
CAECAIH4120.0°120.1°
CAICAGH2120.2°119.9°
CAGCAIH4120.0°120.1°
CAKOABH8109.5°117.0°
H5CAJH6109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
OAACAJCADH5119.9°120.0°
OAACAJCADH6119.8°120.0°
OAACAJCADCAF29.7°89.7°
OAACAJCADCAG150.1°90.0°
OAACAJH5H6120.4°120.0°
CAJCADCAFCAH179.9°179.7°
CAJCADCAFCAG179.8°179.7°
CAJCADCAGCAI179.9°179.7°
CAJCADCAFH10.1°0.3°
CAJCADCAGH20.1°0.3°
CADCAJH5H6120.5°120.0°
CADCAJOAAH7180.0°179.9°
CAHCAFCADH1180.0°180.0°
CAFCAHCAEH3180.0°180.0°
CAHCAFCADCAG0.1°0.0°
CAFCAHCAECAK179.8°180.0°
CAFCAHCAECAI0.1°0.0°
CADCAFCAHCAE0.0°0.0°
CAFCADCAGCAI0.1°0.0°
CAFCADCAGH2179.9°180.0°
CADCAFCAHH3180.0°180.0°
CAFCADCAJH590.2°30.2°
CAFCADCAJH6149.5°150.3°
CAHCAECAKOAC17.5°180.0°
CAHCAECAKCAI179.7°180.0°
CAHCAECAICAG0.1°0.0°
CAHCAECAKOAB163.0°0.1°
CAECAHCAFH1180.0°180.0°
CAHCAECAIH4179.9°180.0°
CADCAGCAICAE0.0°0.0°
CADCAGCAIH2180.0°180.0°
CAGCADCAFH1179.9°180.0°
CADCAGCAIH4180.0°180.0°
CAGCADCAJH590.0°150.1°
CAGCADCAJH630.3°30.0°
OACCAKCAEOAB179.5°179.9°
OACCAKCAECAI162.1°0.0°
OACCAKOABH80.0°0.1°
CAKCAECAICAG179.8°180.0°
CAKCAECAHH30.2°0.0°
CAKCAECAIH40.2°0.0°
CAECAKOABH8179.5°180.0°
CAECAICAGH4180.0°180.0°
CAICAECAKOAB17.3°180.0°
CAECAICAGH2180.0°180.0°
CAICAECAHH3179.9°179.9°
H1CAFCAHH30.0°0.0°
H2CAGCAIH40.0°0.0°
H5CAJOAAH760.1°60.0°
H6CAJOAAH760.1°60.1°

250835

PDB entries from 2026-03-18

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