English 日本語简体中文繁體中文 한국어

✖

Menu

RCSB PDB PDBe BMRB Adv. Search Search help

Summary Geometry Related PDB entries

E30

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N11	C12	sing	1.40Å	1.42Å
C12	C13	sing	1.39Å	1.38Å	Aromatic
C12	C17	doub	1.39Å	1.38Å	Aromatic
C13	C14	doub	1.38Å	1.38Å	Aromatic
C14	C15	sing	1.40Å	1.38Å	Aromatic
C15	C16	doub	1.40Å	1.38Å	Aromatic
C15	C18	sing	1.48Å	1.44Å
C16	C17	sing	1.38Å	1.38Å	Aromatic
C18	N19	sing	1.36Å	1.36Å	Aromatic
C18	N22	doub	1.32Å	1.32Å	Aromatic
N19	N20	sing	1.41Å	1.34Å	Aromatic
N20	N21	doub	1.29Å	1.33Å	Aromatic
N21	N22	sing	1.28Å	1.36Å	Aromatic
N11	H11	sing	0.97Å	1.00Å
C13	H13	sing	1.08Å	1.08Å
C17	H17	sing	1.08Å	1.08Å
C14	H14	sing	1.08Å	1.08Å
C16	H16	sing	1.08Å	1.08Å
N19	H19	sing	0.97Å	1.00Å
N11	H2	sing	0.97Å	1.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
N11	C12	C13	117.9°	119.9°
N11	C12	C17	123.1°	119.9°
C12	N11	H11	109.5°	120.0°
C12	N11	H2	109.5°	119.9°
C13	C12	C17	119.1°	120.1°
C12	C13	C14	121.2°	120.1°
C12	C13	H13	119.4°	120.0°
C12	C17	C16	119.8°	120.1°
C12	C17	H17	120.1°	120.0°
C13	C14	C15	119.7°	119.9°
C14	C13	H13	119.4°	119.9°
C13	C14	H14	120.1°	120.1°
C14	C15	C16	119.1°	119.9°
C14	C15	C18	121.0°	120.1°
C15	C14	H14	120.1°	120.0°
C16	C15	C18	119.9°	120.0°
C15	C16	C17	121.1°	119.9°
C15	C16	H16	119.5°	120.1°
C15	C18	N19	124.6°	126.5°
C15	C18	N22	127.5°	126.5°
C16	C17	H17	120.1°	120.0°
C17	C16	H16	119.4°	120.0°
N19	C18	N22	107.8°	107.1°
C18	N19	N20	109.7°	105.1°
C18	N19	H19	125.2°	127.4°
C18	N22	N21	106.4°	110.5°
N19	N20	N21	105.3°	106.9°
N20	N19	H19	125.1°	127.4°
N20	N21	N22	110.8°	110.4°
H11	N11	H2	109.5°	120.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
N11	C12	C13	C17	179.6°	179.8°
N11	C12	C13	C14	179.8°	180.0°
N11	C12	C17	C16	179.3°	179.8°
C12	N11	H11	H2	120.0°	179.7°
N11	C12	C13	H13	0.2°	0.0°
N11	C12	C17	H17	0.6°	0.0°
C12	C13	C14	H13	180.0°	180.0°
C12	C13	C14	C15	0.0°	0.0°
C13	C12	C17	C16	1.1°	0.5°
C13	C12	N11	H11	180.0°	0.0°
C13	C12	C17	H17	178.9°	179.8°
C12	C13	C14	H14	180.0°	180.0°
C13	C12	N11	H2	59.9°	179.7°
C17	C12	C13	C14	0.6°	0.2°
C12	C17	C16	C15	0.8°	0.5°
C12	C17	C16	H17	180.0°	179.7°
C17	C12	N11	H11	0.4°	179.7°
C17	C12	C13	H13	179.4°	179.7°
C12	C17	C16	H16	179.2°	179.7°
C17	C12	N11	H2	119.6°	0.6°
C13	C14	C15	H14	180.0°	180.0°
C13	C14	C15	C16	0.3°	0.0°
C13	C14	C15	C18	177.5°	180.0°
C14	C15	C16	C18	177.8°	180.0°
C14	C15	C16	C17	0.2°	0.2°
C14	C15	C18	N19	23.7°	180.0°
C14	C15	C18	N22	154.7°	0.3°
C15	C14	C13	H13	179.9°	180.0°
C14	C15	C16	H16	179.9°	180.0°
C15	C16	C17	H16	180.0°	179.8°
C16	C15	C18	N19	158.5°	0.0°
C16	C15	C18	N22	23.1°	179.7°
C15	C16	C17	H17	179.2°	179.8°
C16	C15	C14	H14	179.7°	180.0°
C18	C15	C16	C17	178.0°	179.8°
C15	C18	N19	N22	178.7°	179.8°
C15	C18	N19	N20	179.3°	180.0°
C15	C18	N22	N21	179.0°	179.9°
C18	C15	C14	H14	2.5°	0.0°
C18	C15	C16	H16	2.0°	0.0°
C15	C18	N19	H19	0.8°	0.0°
C18	N19	N20	H19	180.0°	180.0°
C18	N19	N20	N21	0.6°	0.0°
N19	C18	N22	N21	0.3°	0.4°
N22	C18	N19	N20	0.6°	0.2°
C18	N22	N21	N20	0.0°	0.4°
N22	C18	N19	H19	179.5°	179.8°
N19	N20	N21	N22	0.4°	0.2°
N21	N20	N19	H19	179.4°	180.0°
H13	C13	C14	H14	0.1°	0.0°
H17	C17	C16	H16	0.8°	0.0°

246704

PDB entries from 2025-12-24

PDB statistics

PDBj update info

Contact PDBj

numon