Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

E1O

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2AC2sing1.51Å1.41Å
C2N1doub1.32Å1.34ÅAromatic
C2C3sing1.39Å1.40ÅAromatic
N1C6sing1.32Å1.39ÅAromatic
O3C3sing1.36Å1.37Å
C3C4doub1.40Å1.41ÅAromatic
C6C5doub1.38Å1.40ÅAromatic
C4C5sing1.40Å1.42ÅAromatic
C4C4Asing1.48Å1.41Å
C5C5Asing1.51Å1.42Å
C4ANdoub1.29Å1.36Å
OXTCdoub1.21Å1.26Å
C5AO4Psing1.43Å1.43Å
NCAsing1.47Å1.48Å
O4PPsing1.61Å1.62Å
CCAsing1.51Å1.56Å
COsing1.34Å1.26Å
CACBsing1.53Å1.54Å
O1PPdoub1.48Å1.47Å
CBSGsing1.81Å1.82Å
PO2Psing1.61Å1.48Å
PO3Psing1.61Å1.47Å
C6H1sing1.08Å1.08Å
SGH2sing1.35Å1.30Å
CBH3sing1.09Å1.10Å
CBH4sing1.09Å1.10Å
CAH5sing1.09Å1.10Å
OH6sing0.97Å0.95Å
O3PH7sing0.97Å0.95Å
O2PH8sing0.97Å0.95Å
C5AH9sing1.09Å1.10Å
C5AH10sing1.09Å1.10Å
C2AH11sing1.09Å1.10Å
C2AH12sing1.09Å1.10Å
C2AH13sing1.09Å1.10Å
O3H14sing0.97Å0.95Å
C4AH15sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2AC2N1118.2°119.6°
C2AC2C3122.7°119.6°
C2C2AH11109.5°109.5°
C2C2AH12109.4°109.5°
C2C2AH13109.5°109.5°
N1C2C3119.0°120.8°
C2N1C6120.2°122.1°
C2C3O3118.1°120.5°
C2C3C4123.0°118.9°
N1C6C5122.2°121.1°
N1C6H1118.9°119.5°
O3C3C4118.9°120.6°
C3O3H14109.5°114.0°
C3C4C5116.8°118.1°
C3C4C4A120.4°120.9°
C6C5C4118.7°119.0°
C6C5C5A117.2°120.5°
C5C6H1118.9°119.4°
C5C4C4A122.7°120.9°
C4C5C5A124.1°120.5°
C4C4AN116.4°120.0°
C4C4AH15121.8°120.0°
C5C5AO4P113.8°109.5°
C5C5AH9108.4°109.4°
C5C5AH10108.4°109.5°
C4ANCA132.5°120.0°
NC4AH15121.8°120.0°
OXTCCA119.2°120.0°
OXTCO123.4°120.0°
C5AO4PP121.1°123.0°
O4PC5AH9108.4°109.4°
O4PC5AH10108.4°109.5°
NCAC111.4°109.4°
NCACB105.9°109.5°
NCAH5112.3°109.4°
O4PPO1P97.3°109.5°
O4PPO2P101.7°109.5°
O4PPO3P97.4°109.5°
CACO117.1°120.0°
CCACB104.5°109.5°
CCAH5111.1°109.5°
COH6109.5°117.0°
CACBSG119.4°109.5°
CACBH3106.9°109.5°
CACBH4107.0°109.5°
CBCAH5111.3°109.5°
O1PPO2P117.4°109.4°
O1PPO3P118.4°109.4°
CBSGH2102.0°103.0°
SGCBH3107.0°109.4°
SGCBH4106.9°109.5°
O2PPO3P117.4°109.5°
PO2PH8109.5°114.0°
PO3PH7109.5°114.0°
H3CBH4109.5°109.4°
H9C5AH10109.5°109.5°
H11C2AH12109.5°109.4°
H11C2AH13109.5°109.5°
H12C2AH13109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2AC2N1C3179.8°180.0°
C2AC2N1C6180.0°180.0°
C2AC2C3O30.4°0.0°
C2AC2C3C4179.3°179.8°
C2C2AH11H12120.0°120.0°
C2C2AH11H13120.0°120.0°
C2C2AH12H13120.0°120.0°
N1C2C3O3179.8°180.0°
N1C2C3C40.5°0.2°
C2N1C6C50.4°0.0°
C2N1C6H1179.6°179.7°
N1C2C2AH110.0°90.0°
N1C2C2AH12120.0°150.0°
N1C2C2AH13120.0°30.0°
C3C2N1C60.2°0.0°
C2C3O3C4179.7°179.8°
C2C3C4C50.9°0.4°
C2C3C4C4A177.7°180.0°
C3C2C2AH11179.8°90.0°
C3C2C2AH1259.8°30.0°
C3C2C2AH1360.2°150.0°
C2C3O3H14180.0°90.0°
N1C6C5H1180.0°179.7°
N1C6C5C40.0°0.2°
N1C6C5C5A178.3°179.8°
O3C3C4C5179.4°179.8°
O3C3C4C4A2.6°0.2°
C3C4C5C60.6°0.4°
C3C4C5C4A176.8°179.6°
C3C4C5C5A177.6°179.6°
C3C4C4AN52.0°0.5°
C4C3O3H140.4°89.8°
C3C4C4AH15128.0°179.6°
C6C5C4C5A178.2°180.0°
C6C5C4C4A177.4°180.0°
C6C5C5AO4P119.7°0.0°
C6C5C5AH90.9°120.0°
C6C5C5AH10119.6°120.0°
C5C4C4AN124.7°179.9°
C4C5C5AO4P62.0°180.0°
C4C5C6H1180.0°179.9°
C4C5C5AH9177.3°60.0°
C4C5C5AH1058.6°60.0°
C5C4C4AH1555.3°0.0°
C4AC4C5C5A0.8°0.0°
C4C4ANH15180.0°179.9°
C4C4ANCA171.7°180.0°
C5C5AO4PH9120.6°119.9°
C5C5AO4PH10120.7°120.0°
C5C5AO4PP150.4°180.0°
C5AC5C6H11.7°0.1°
C5C5AH9H10118.0°120.0°
C4ANCAC114.8°120.1°
C4ANCACB132.1°119.9°
C4ANCAH510.5°0.1°
OXTCCAN9.8°0.0°
OXTCCAO174.0°180.0°
OXTCCACB123.7°120.0°
OXTCCAH5116.1°119.9°
OXTCOH60.0°0.0°
C5AO4PPO1P164.4°55.0°
C5AO4PPO2P44.4°175.0°
C5AO4PPO3P75.6°65.0°
O4PC5AH9H10118.1°120.0°
NCACCB113.9°120.0°
NCACH5126.0°119.9°
NCACO164.2°180.0°
NCACBH5122.2°120.0°
NCACBSG88.0°60.0°
NCACBH333.4°180.0°
NCACBH4150.6°60.0°
CANC4AH158.2°0.1°
O4PPO1PO2P107.3°120.0°
O4PPO1PO3P102.5°120.0°
O4PPO2PO3P104.9°120.1°
O4PPO3PH7102.4°60.0°
O4PPO2PH8104.6°180.0°
PO4PC5AH989.0°60.1°
PO4PC5AH1029.7°59.9°
CCACBH5120.0°120.0°
CCACBSG154.2°180.0°
CCACBH384.4°60.0°
CCACBH432.8°60.0°
CACOH6173.7°180.0°
OCCACB50.3°60.0°
OCCAH569.9°60.0°
CACBSGH3121.4°120.0°
CACBSGH4121.4°120.1°
CACBSGH2180.0°179.9°
CACBH3H4115.5°120.0°
O1PPO2PO3P150.5°119.9°
O1PPO3PH70.0°180.0°
O1PPO2PH80.0°60.0°
SGCBH3H4115.5°119.9°
SGCBCAH534.2°60.0°
O2PPO3PH7150.2°60.0°
O3PPO2PH8150.5°59.9°
H2SGCBH358.6°60.0°
H2SGCBH458.6°60.0°
H3CBCAH5155.6°60.0°
H4CBCAH587.2°180.0°
H11C2AH12H13120.0°120.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon