DZ4
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C2 | N1 | doub | 1.32Å | 1.34Å | Aromatic |
| N1 | C6 | sing | 1.33Å | 1.36Å | Aromatic |
| N3 | C2 | sing | 1.32Å | 1.32Å | Aromatic |
| C2 | H2 | sing | 1.08Å | 1.08Å | |
| N3 | C4 | doub | 1.33Å | 1.34Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.34Å | Aromatic |
| C4 | C5 | sing | 1.41Å | 1.43Å | Aromatic |
| C5 | N7 | sing | 1.36Å | 1.35Å | Aromatic |
| C5 | C6 | doub | 1.40Å | 1.41Å | Aromatic |
| C6 | N6 | sing | 1.38Å | 1.38Å | |
| N6 | HN6 | sing | 0.97Å | 1.00Å | |
| N6 | HN6A | sing | 0.97Å | 1.00Å | |
| C8 | N7 | doub | 1.30Å | 1.30Å | Aromatic |
| N9 | C8 | sing | 1.36Å | 1.38Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| C1' | N9 | sing | 1.47Å | 1.44Å | |
| O5' | PA | sing | 1.61Å | 1.53Å | |
| O1A | PA | doub | 1.48Å | 1.28Å | |
| PA | O2A | sing | 1.61Å | 1.40Å | |
| PA | N3A | sing | 1.68Å | 1.59Å | |
| O1B | PB | doub | 1.48Å | 1.27Å | |
| N3A | PB | sing | 1.68Å | 1.66Å | |
| PB | O2B | sing | 1.61Å | 1.28Å | |
| PB | O3B | sing | 1.61Å | 1.53Å | |
| O1G | PG | doub | 1.48Å | 1.32Å | |
| PG | O3B | sing | 1.61Å | 1.53Å | |
| PG | O2G | sing | 1.61Å | 1.33Å | |
| PG | O3G | sing | 1.61Å | 1.36Å | |
| O4' | C1' | sing | 1.44Å | 1.33Å | |
| C1' | C2' | sing | 1.54Å | 1.54Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C3' | C2' | sing | 1.55Å | 1.51Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C2' | H2'A | sing | 1.09Å | 1.10Å | |
| O2A | HO2A | sing | 0.97Å | 0.95Å | |
| O2B | HO2B | sing | 0.97Å | 0.95Å | |
| O2G | HO2G | sing | 0.97Å | 0.95Å | |
| C4' | C3' | sing | 1.55Å | 1.53Å | |
| C3' | O3' | sing | 1.43Å | 1.34Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| N3A | HN3A | sing | 1.01Å | 1.00Å | |
| O3G | HO3G | sing | 0.97Å | 0.95Å | |
| O4' | C4' | sing | 1.44Å | 1.37Å | |
| C4' | C5' | sing | 1.53Å | 1.53Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C5' | O5' | sing | 1.43Å | 1.40Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'A | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2 | N1 | C6 | 121.2° | 121.2° |
| N1 | C2 | N3 | 121.9° | 122.5° |
| N1 | C2 | H2 | 119.0° | 118.7° |
| N1 | C6 | C5 | 119.2° | 118.5° |
| N1 | C6 | N6 | 120.1° | 120.8° |
| N3 | C2 | H2 | 119.1° | 118.8° |
| C2 | N3 | C4 | 120.4° | 120.6° |
| N3 | C4 | N9 | 132.8° | 134.9° |
| N3 | C4 | C5 | 120.6° | 119.1° |
| N9 | C4 | C5 | 106.5° | 106.0° |
| C4 | N9 | C8 | 107.5° | 107.4° |
| C4 | N9 | C1' | 123.5° | 126.2° |
| C4 | C5 | N7 | 107.0° | 107.1° |
| C4 | C5 | C6 | 116.6° | 118.2° |
| N7 | C5 | C6 | 136.4° | 134.7° |
| C5 | N7 | C8 | 108.8° | 109.5° |
| C5 | C6 | N6 | 120.6° | 120.7° |
| C6 | N6 | HN6 | 109.5° | 119.9° |
| C6 | N6 | HN6A | 109.5° | 120.0° |
| HN6 | N6 | HN6A | 109.5° | 120.1° |
| N7 | C8 | N9 | 110.2° | 110.0° |
| N7 | C8 | H8 | 124.9° | 125.0° |
| N9 | C8 | H8 | 124.9° | 125.0° |
| C8 | N9 | C1' | 129.0° | 126.3° |
| N9 | C1' | O4' | 112.0° | 109.9° |
| N9 | C1' | C2' | 108.7° | 109.9° |
| N9 | C1' | H1' | 107.5° | 109.9° |
| O5' | PA | O1A | 109.5° | 109.5° |
| O5' | PA | O2A | 103.2° | 109.5° |
| O5' | PA | N3A | 108.0° | 109.5° |
| PA | O5' | C5' | 122.2° | 123.0° |
| O1A | PA | O2A | 118.4° | 109.5° |
| O1A | PA | N3A | 109.4° | 109.5° |
| O2A | PA | N3A | 107.7° | 109.4° |
| PA | O2A | HO2A | 109.5° | 114.0° |
| PA | N3A | PB | 132.2° | 111.0° |
| PA | N3A | HN3A | 102.5° | 111.0° |
| O1B | PB | N3A | 106.0° | 109.5° |
| O1B | PB | O2B | 111.7° | 109.4° |
| O1B | PB | O3B | 112.7° | 109.5° |
| N3A | PB | O2B | 107.7° | 109.5° |
| N3A | PB | O3B | 110.5° | 109.5° |
| PB | N3A | HN3A | 102.5° | 111.0° |
| O2B | PB | O3B | 108.2° | 109.5° |
| PB | O2B | HO2B | 109.5° | 114.0° |
| PB | O3B | PG | 128.6° | 134.0° |
| O1G | PG | O3B | 109.1° | 109.5° |
| O1G | PG | O2G | 114.2° | 109.5° |
| O1G | PG | O3G | 108.4° | 109.5° |
| O3B | PG | O2G | 109.8° | 109.4° |
| O3B | PG | O3G | 107.5° | 109.5° |
| O2G | PG | O3G | 107.7° | 109.5° |
| PG | O2G | HO2G | 109.5° | 114.0° |
| PG | O3G | HO3G | 109.5° | 114.0° |
| O4' | C1' | C2' | 107.0° | 107.3° |
| O4' | C1' | H1' | 109.2° | 110.0° |
| C1' | O4' | C4' | 112.3° | 107.0° |
| C2' | C1' | H1' | 112.5° | 109.9° |
| C1' | C2' | C3' | 106.5° | 104.2° |
| C1' | C2' | H2' | 110.5° | 110.5° |
| C1' | C2' | H2'A | 110.4° | 110.4° |
| C3' | C2' | H2' | 110.5° | 110.5° |
| C3' | C2' | H2'A | 110.5° | 110.6° |
| C2' | C3' | C4' | 99.6° | 102.1° |
| C2' | C3' | O3' | 120.1° | 110.9° |
| C2' | C3' | H3' | 113.2° | 110.9° |
| H2' | C2' | H2'A | 108.4° | 110.5° |
| C4' | C3' | O3' | 118.4° | 110.9° |
| C4' | C3' | H3' | 115.1° | 111.0° |
| C3' | C4' | O4' | 110.9° | 103.5° |
| C3' | C4' | C5' | 108.9° | 110.6° |
| C3' | C4' | H4' | 111.2° | 110.6° |
| O3' | C3' | H3' | 91.6° | 110.8° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| O4' | C4' | C5' | 115.5° | 110.6° |
| O4' | C4' | H4' | 103.9° | 110.8° |
| C5' | C4' | H4' | 106.2° | 110.6° |
| C4' | C5' | O5' | 119.9° | 109.4° |
| C4' | C5' | H5' | 106.2° | 109.4° |
| C4' | C5' | H5'A | 106.1° | 109.5° |
| O5' | C5' | H5' | 106.1° | 109.5° |
| O5' | C5' | H5'A | 106.2° | 109.5° |
| H5' | C5' | H5'A | 112.5° | 109.6° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N1 | C2 | N3 | H2 | 180.0° | 179.9° |
| N1 | C2 | N3 | C4 | 0.8° | 0.1° |
| C2 | N1 | C6 | C5 | 0.9° | 0.1° |
| C2 | N1 | C6 | N6 | 179.8° | 180.0° |
| C6 | N1 | C2 | N3 | 0.5° | 0.1° |
| C6 | N1 | C2 | H2 | 179.5° | 180.0° |
| N1 | C6 | C5 | C4 | 1.5° | 0.1° |
| N1 | C6 | C5 | N7 | 179.6° | 180.0° |
| N1 | C6 | C5 | N6 | 179.3° | 179.9° |
| N1 | C6 | N6 | HN6 | 0.0° | 0.1° |
| N1 | C6 | N6 | HN6A | 120.0° | 179.9° |
| C2 | N3 | C4 | N9 | 179.7° | 180.0° |
| C2 | N3 | C4 | C5 | 1.5° | 0.0° |
| H2 | C2 | N3 | C4 | 179.2° | 180.0° |
| N3 | C4 | N9 | C5 | 178.4° | 180.0° |
| N3 | C4 | C5 | N7 | 179.6° | 180.0° |
| N3 | C4 | C5 | C6 | 1.8° | 0.0° |
| N3 | C4 | N9 | C8 | 179.1° | 180.0° |
| N3 | C4 | N9 | C1' | 2.3° | 0.0° |
| N9 | C4 | C5 | N7 | 0.9° | 0.0° |
| N9 | C4 | C5 | C6 | 179.5° | 180.0° |
| C4 | N9 | C8 | N7 | 0.2° | 0.0° |
| C4 | N9 | C8 | C1' | 178.5° | 180.0° |
| C4 | N9 | C8 | H8 | 179.8° | 180.0° |
| C4 | N9 | C1' | O4' | 139.7° | 157.2° |
| C4 | N9 | C1' | C2' | 102.2° | 85.0° |
| C4 | N9 | C1' | H1' | 19.8° | 36.0° |
| C4 | C5 | N7 | C6 | 178.2° | 180.0° |
| C4 | C5 | C6 | N6 | 179.2° | 180.0° |
| C4 | C5 | N7 | C8 | 0.8° | 0.0° |
| C5 | C4 | N9 | C8 | 0.7° | 0.0° |
| C5 | C4 | N9 | C1' | 179.3° | 180.0° |
| N7 | C5 | C6 | N6 | 1.1° | 0.1° |
| C5 | N7 | C8 | N9 | 0.4° | 0.0° |
| C5 | N7 | C8 | H8 | 179.6° | 180.0° |
| C5 | C6 | N6 | HN6 | 179.3° | 180.0° |
| C5 | C6 | N6 | HN6A | 60.7° | 0.0° |
| C6 | C5 | N7 | C8 | 179.0° | 180.0° |
| C6 | N6 | HN6 | HN6A | 120.0° | 180.0° |
| N7 | C8 | N9 | H8 | 180.0° | 180.0° |
| N7 | C8 | N9 | C1' | 178.7° | 180.0° |
| C8 | N9 | C1' | O4' | 38.5° | 22.8° |
| C8 | N9 | C1' | C2' | 79.5° | 95.0° |
| C8 | N9 | C1' | H1' | 158.5° | 144.0° |
| H8 | C8 | N9 | C1' | 1.3° | 0.0° |
| N9 | C1' | O4' | C2' | 119.0° | 119.4° |
| N9 | C1' | O4' | H1' | 119.0° | 121.1° |
| N9 | C1' | C2' | H1' | 119.0° | 121.0° |
| N9 | C1' | C2' | C3' | 104.3° | 121.4° |
| N9 | C1' | C2' | H2' | 135.6° | 119.9° |
| N9 | C1' | C2' | H2'A | 15.7° | 2.6° |
| N9 | C1' | O4' | C4' | 112.2° | 145.9° |
| O5' | PA | O1A | O2A | 117.9° | 120.0° |
| O5' | PA | O1A | N3A | 118.2° | 120.0° |
| O5' | PA | O2A | N3A | 114.1° | 120.0° |
| O5' | PA | N3A | PB | 81.1° | 180.0° |
| O5' | PA | O2A | HO2A | 121.1° | 60.0° |
| O5' | PA | N3A | HN3A | 38.9° | 56.0° |
| PA | O5' | C5' | C4' | 143.7° | 180.0° |
| PA | O5' | C5' | H5' | 96.3° | 60.0° |
| PA | O5' | C5' | H5'A | 23.7° | 60.1° |
| O1A | PA | O2A | N3A | 124.8° | 120.0° |
| O1A | PA | N3A | PB | 38.0° | 60.0° |
| O1A | PA | O2A | HO2A | 0.0° | 180.0° |
| O1A | PA | N3A | HN3A | 158.0° | 64.0° |
| O1A | PA | O5' | C5' | 52.9° | 45.0° |
| O2A | PA | N3A | PB | 168.0° | 60.0° |
| O2A | PA | N3A | HN3A | 72.0° | 176.0° |
| O2A | PA | O5' | C5' | 179.9° | 165.0° |
| PA | N3A | PB | O1B | 0.2° | 60.0° |
| PA | N3A | PB | HN3A | 120.0° | 123.9° |
| PA | N3A | PB | O2B | 119.4° | 60.0° |
| PA | N3A | PB | O3B | 122.6° | 180.0° |
| N3A | PA | O2A | HO2A | 124.8° | 60.0° |
| N3A | PA | O5' | C5' | 66.2° | 75.0° |
| O1B | PB | N3A | O2B | 119.7° | 120.0° |
| O1B | PB | N3A | O3B | 122.3° | 120.0° |
| O1B | PB | O2B | O3B | 124.6° | 120.0° |
| O1B | PB | O3B | PG | 54.6° | 60.0° |
| O1B | PB | O2B | HO2B | 0.0° | 180.0° |
| O1B | PB | N3A | HN3A | 120.3° | 176.1° |
| N3A | PB | O2B | O3B | 119.5° | 120.0° |
| N3A | PB | O3B | PG | 63.7° | 180.0° |
| N3A | PB | O2B | HO2B | 116.0° | 60.0° |
| O2B | PB | O3B | PG | 178.6° | 60.0° |
| O2B | PB | N3A | HN3A | 0.6° | 64.0° |
| PB | O3B | PG | O1G | 1.6° | 45.0° |
| PB | O3B | PG | O2G | 127.4° | 165.0° |
| PB | O3B | PG | O3G | 115.8° | 75.0° |
| O3B | PB | O2B | HO2B | 124.6° | 60.1° |
| O3B | PB | N3A | HN3A | 117.4° | 56.1° |
| O1G | PG | O3B | O2G | 125.8° | 120.0° |
| O1G | PG | O3B | O3G | 117.4° | 120.0° |
| O1G | PG | O2G | O3G | 120.4° | 120.1° |
| O1G | PG | O2G | HO2G | 0.0° | 60.1° |
| O1G | PG | O3G | HO3G | 0.0° | 180.0° |
| O3B | PG | O2G | O3G | 116.7° | 120.0° |
| O3B | PG | O2G | HO2G | 122.8° | 180.0° |
| O3B | PG | O3G | HO3G | 117.8° | 60.0° |
| O2G | PG | O3G | HO3G | 124.0° | 60.0° |
| O3G | PG | O2G | HO2G | 120.4° | 60.0° |
| O4' | C1' | C2' | H1' | 119.9° | 119.5° |
| O4' | C1' | C2' | C3' | 16.8° | 2.0° |
| O4' | C1' | C2' | H2' | 103.2° | 120.7° |
| O4' | C1' | C2' | H2'A | 136.8° | 116.8° |
| C1' | O4' | C4' | C3' | 5.7° | 40.1° |
| C1' | O4' | C4' | C5' | 130.2° | 158.5° |
| C1' | O4' | C4' | H4' | 113.9° | 78.5° |
| C1' | C2' | C3' | H2' | 120.0° | 118.7° |
| C1' | C2' | C3' | H2'A | 120.0° | 118.7° |
| C1' | C2' | H2' | H2'A | 121.2° | 122.5° |
| C1' | C2' | C3' | C4' | 18.3° | 20.9° |
| C1' | C2' | C3' | O3' | 149.2° | 139.1° |
| C1' | C2' | C3' | H3' | 104.4° | 97.4° |
| C2' | C1' | O4' | C4' | 6.8° | 26.5° |
| H1' | C1' | C2' | C3' | 136.7° | 117.5° |
| H1' | C1' | C2' | H2' | 16.7° | 1.1° |
| H1' | C1' | C2' | H2'A | 103.3° | 123.7° |
| H1' | C1' | O4' | C4' | 128.8° | 93.0° |
| C3' | C2' | H2' | H2'A | 121.2° | 122.8° |
| C2' | C3' | C4' | O3' | 132.0° | 118.2° |
| C2' | C3' | C4' | H3' | 121.3° | 118.2° |
| C2' | C3' | O3' | H3' | 118.1° | 123.6° |
| C2' | C3' | O3' | HO3' | 180.0° | 61.5° |
| C2' | C3' | C4' | O4' | 15.4° | 37.0° |
| C2' | C3' | C4' | C5' | 143.6° | 155.5° |
| C2' | C3' | C4' | H4' | 99.7° | 81.6° |
| H2' | C2' | C3' | C4' | 101.7° | 97.7° |
| H2' | C2' | C3' | O3' | 29.2° | 20.4° |
| H2' | C2' | C3' | H3' | 135.6° | 144.0° |
| H2'A | C2' | C3' | C4' | 138.3° | 139.6° |
| H2'A | C2' | C3' | O3' | 90.8° | 102.2° |
| H2'A | C2' | C3' | H3' | 15.6° | 21.3° |
| C4' | C3' | O3' | H3' | 119.8° | 123.7° |
| C4' | C3' | O3' | HO3' | 57.9° | 174.2° |
| C3' | C4' | O4' | C5' | 124.5° | 118.4° |
| C3' | C4' | O4' | H4' | 119.6° | 118.5° |
| C3' | C4' | C5' | H4' | 119.8° | 122.9° |
| C3' | C4' | C5' | O5' | 76.2° | 175.0° |
| C3' | C4' | C5' | H5' | 163.8° | 55.1° |
| C3' | C4' | C5' | H5'A | 43.8° | 65.0° |
| O3' | C3' | C4' | O4' | 147.4° | 155.2° |
| O3' | C3' | C4' | C5' | 84.4° | 86.3° |
| O3' | C3' | C4' | H4' | 32.2° | 36.6° |
| H3' | C3' | O3' | HO3' | 61.9° | 62.2° |
| H3' | C3' | C4' | O4' | 105.9° | 81.2° |
| H3' | C3' | C4' | C5' | 22.3° | 37.3° |
| H3' | C3' | C4' | H4' | 139.0° | 160.2° |
| O4' | C4' | C5' | H4' | 114.6° | 123.1° |
| O4' | C4' | C5' | O5' | 49.4° | 71.0° |
| O4' | C4' | C5' | H5' | 70.7° | 169.1° |
| O4' | C4' | C5' | H5'A | 169.4° | 49.0° |
| C4' | C5' | O5' | H5' | 120.0° | 119.9° |
| C4' | C5' | O5' | H5'A | 120.0° | 120.0° |
| C4' | C5' | H5' | H5'A | 115.7° | 120.0° |
| H4' | C4' | C5' | O5' | 163.9° | 52.1° |
| H4' | C4' | C5' | H5' | 43.9° | 67.8° |
| H4' | C4' | C5' | H5'A | 76.0° | 172.1° |
| O5' | C5' | H5' | H5'A | 115.7° | 120.1° |
