Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryGeometryRelated PDB entries

DYY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAZCAYdoub1.39Å1.39ÅAromatic
CAYCAXsing1.38Å1.39ÅAromatic
CAYHAYsing1.08Å1.08Å
OBACAZsing1.36Å1.37Å
CAZCAMsing1.39Å1.39ÅAromatic
CBBOBAsing1.43Å1.44Å
CAOCBBsing1.53Å1.53Å
CBBHBBsing1.09Å1.10Å
CBBHBBAsing1.09Å1.10Å
CAOOANsing1.43Å1.46Å
CAOHAOsing1.09Å1.10Å
CAOHAOAsing1.09Å1.10Å
OANCAMsing1.36Å1.37Å
CAMCALdoub1.39Å1.40ÅAromatic
CALCAKsing1.38Å1.38ÅAromatic
CALHALsing1.08Å1.08Å
CAXCAKdoub1.38Å1.38ÅAromatic
CAKHAKsing1.08Å1.08Å
CAXSAWsing1.76Å1.76Å
NAVSAWsing1.66Å1.71Å
OBDSAWdoub1.42Å1.50Å
SAWOAJdoub1.42Å1.49Å
CAINAVsing1.47Å1.48Å
NAVCAUsing1.47Å1.49Å
CATCAUsing1.53Å1.55Å
CAUHAUsing1.09Å1.10Å
CAUHAUAsing1.09Å1.10Å
NAGCATsing1.47Å1.48Å
CATHATsing1.09Å1.10Å
CATHATAsing1.09Å1.10Å
CAHCAIsing1.53Å1.54Å
CAIHAIsing1.09Å1.10Å
CAIHAIAsing1.09Å1.10Å
CAHNAGsing1.47Å1.48Å
CAHHAHsing1.09Å1.10Å
CAHHAHAsing1.09Å1.10Å
SAFNAGsing1.66Å1.69Å
OABSAFdoub1.42Å1.50Å
SAFOASdoub1.42Å1.49Å
SAFCAEsing1.76Å1.77Å
CADCAEdoub1.38Å1.40ÅAromatic
CAECARsing1.38Å1.39ÅAromatic
FAACADsing1.35Å1.36Å
CADCACsing1.38Å1.40ÅAromatic
CACCAPdoub1.38Å1.39ÅAromatic
CACHACsing1.08Å1.08Å
CAPCAQsing1.38Å1.39ÅAromatic
CAPHAPsing1.08Å1.08Å
CARCAQdoub1.39Å1.39ÅAromatic
CAQHAQsing1.08Å1.08Å
CARFBCsing1.35Å1.34Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CAZCAYCAX120.7°120.1°
CAZCAYHAY119.6°119.9°
CAYCAZOBA118.5°119.5°
CAYCAZCAM119.7°119.8°
CAXCAYHAY119.7°120.0°
CAYCAXCAK119.4°120.1°
CAYCAXSAW120.3°119.9°
OBACAZCAM121.7°120.7°
CAZOBACBB112.8°116.8°
CAZCAMOAN122.4°120.8°
CAZCAMCAL119.2°119.8°
OBACBBCAO109.8°108.2°
OBACBBHBB109.4°109.7°
OBACBBHBBA109.3°109.7°
CAOCBBHBB109.4°109.7°
CAOCBBHBBA109.3°109.8°
CBBCAOOAN116.4°108.3°
CBBCAOHAO107.2°109.7°
CBBCAOHAOA105.6°109.7°
HBBCBBHBBA109.7°109.8°
OANCAOHAO107.2°109.7°
OANCAOHAOA105.6°109.7°
CAOOANCAM115.6°116.7°
HAOCAOHAOA115.1°109.7°
OANCAMCAL118.5°119.4°
CAMCALCAK120.8°120.0°
CAMCALHAL119.6°119.9°
CAKCALHAL119.6°120.0°
CALCAKCAX120.1°120.1°
CALCAKHAK119.9°119.9°
CAXCAKHAK119.9°120.0°
CAKCAXSAW120.2°119.9°
CAXSAWNAV115.7°107.2°
CAXSAWOBD108.5°106.4°
CAXSAWOAJ108.1°106.4°
NAVSAWOBD106.8°106.3°
NAVSAWOAJ109.4°106.4°
SAWNAVCAI115.6°120.6°
SAWNAVCAU112.7°120.6°
OBDSAWOAJ108.0°123.2°
CAINAVCAU109.9°118.8°
NAVCAICAH108.7°108.6°
NAVCAIHAI109.7°109.6°
NAVCAIHAIA109.9°109.7°
NAVCAUCAT110.0°108.7°
NAVCAUHAU109.3°109.6°
NAVCAUHAUA109.2°109.6°
CATCAUHAU109.3°109.6°
CATCAUHAUA109.2°109.7°
CAUCATNAG107.5°108.6°
CAUCATHAT110.1°109.7°
CAUCATHATA110.6°109.6°
HAUCAUHAUA109.9°109.6°
NAGCATHAT110.1°109.6°
NAGCATHATA110.6°109.7°
CATNAGCAH109.1°118.7°
CATNAGSAF115.1°120.7°
HATCATHATA108.0°109.6°
CAHCAIHAI109.7°109.6°
CAHCAIHAIA109.9°109.8°
CAICAHNAG109.2°108.6°
CAICAHHAH109.5°109.6°
CAICAHHAHA109.6°109.6°
HAICAIHAIA108.9°109.6°
NAGCAHHAH109.6°109.7°
NAGCAHHAHA109.6°109.5°
CAHNAGSAF113.6°120.6°
HAHCAHHAHA109.3°109.8°
NAGSAFOAB108.9°106.4°
NAGSAFOAS107.6°106.4°
NAGSAFCAE115.8°107.2°
OABSAFOAS110.1°123.2°
OABSAFCAE106.9°106.4°
OASSAFCAE107.5°106.4°
SAFCAECAD119.6°120.0°
SAFCAECAR120.7°120.0°
CADCAECAR119.7°119.9°
CAECADFAA120.1°120.0°
CAECADCAC119.5°120.0°
CAECARCAQ120.8°120.0°
CAECARFBC119.4°120.0°
FAACADCAC120.4°120.0°
CADCACCAP120.7°120.0°
CADCACHAC119.6°120.0°
CAPCACHAC119.7°120.0°
CACCAPCAQ119.7°120.1°
CACCAPHAP120.1°120.0°
CAQCAPHAP120.1°120.0°
CAPCAQCAR119.6°120.1°
CAPCAQHAQ120.2°120.0°
CARCAQHAQ120.2°119.9°
CAQCARFBC119.8°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CAZCAYCAXHAY180.0°179.7°
CAYCAZOBACAM179.8°179.7°
CAYCAZOBACBB146.9°163.0°
CAYCAZCAMOAN180.0°179.7°
CAYCAZCAMCAL0.4°0.1°
CAZCAYCAXCAK1.3°0.0°
CAZCAYCAXSAW179.4°179.7°
CAXCAYCAZOBA179.3°179.6°
CAXCAYCAZCAM0.5°0.1°
CAYCAXCAKCAL1.1°0.2°
CAYCAXCAKSAW178.2°179.7°
CAYCAXCAKHAK178.9°180.0°
CAYCAXSAWNAV92.3°90.0°
CAYCAXSAWOBD27.7°156.5°
CAYCAXSAWOAJ144.6°23.5°
HAYCAYCAZOBA0.7°0.7°
HAYCAYCAZCAM179.5°179.6°
HAYCAYCAXCAK178.8°179.7°
HAYCAYCAXSAW0.6°0.0°
CAZOBACBBCAO52.4°46.2°
CAZOBACBBHBB172.4°165.9°
CAZOBACBBHBBA67.5°73.5°
OBACAZCAMOAN0.2°0.6°
OBACAZCAMCAL179.8°179.6°
CAMCAZOBACBB33.3°17.3°
CAZCAMOANCAO9.4°17.5°
CAZCAMOANCAL179.6°179.9°
CAZCAMCALCAK0.6°0.0°
CAZCAMCALHAL179.4°179.8°
OBACBBCAOHBB120.0°119.7°
OBACBBCAOHBBA119.9°119.6°
OBACBBHBBHBBA119.9°120.5°
OBACBBCAOOAN43.8°59.7°
OBACBBCAOHAO76.2°60.0°
OBACBBCAOHAOA160.6°179.4°
CAOCBBHBBHBBA119.9°120.7°
CBBCAOOANHAO120.0°119.7°
CBBCAOOANHAOA116.8°119.7°
CBBCAOHAOHAOA117.2°120.5°
CBBCAOOANCAM13.3°46.3°
HBBCBBCAOOAN163.8°179.4°
HBBCBBCAOHAO43.8°59.6°
HBBCBBCAOHAOA79.4°60.9°
HBBACBBCAOOAN76.1°59.9°
HBBACBBCAOHAO163.9°179.7°
HBBACBBCAOHAOA40.7°59.8°
OANCAOHAOHAOA117.1°120.6°
CAOOANCAMCAL170.2°162.7°
HAOCAOOANCAM106.7°73.4°
HAOACAOOANCAM130.2°166.0°
OANCAMCALCAK179.8°179.8°
OANCAMCALHAL0.2°0.3°
CAMCALCAKHAL180.0°179.9°
CAMCALCAKCAX0.2°0.1°
CAMCALCAKHAK179.8°180.0°
CALCAKCAXHAK180.0°179.9°
CALCAKCAXSAW179.3°179.6°
HALCALCAKCAX179.8°180.0°
HALCALCAKHAK0.2°0.2°
CAKCAXSAWNAV89.5°90.2°
CAKCAXSAWOBD150.5°23.2°
CAKCAXSAWOAJ33.5°156.2°
HAKCAKCAXSAW0.7°0.3°
CAXSAWNAVOBD120.9°113.5°
CAXSAWNAVOAJ122.4°113.5°
CAXSAWOBDOAJ117.0°123.0°
CAXSAWNAVCAI49.6°90.2°
CAXSAWNAVCAU78.0°90.0°
NAVSAWOBDOAJ117.6°122.9°
SAWNAVCAICAU128.9°179.8°
SAWNAVCAUCAT169.7°124.8°
SAWNAVCAUHAU70.3°115.4°
SAWNAVCAUHAUA49.9°4.9°
SAWNAVCAICAH172.5°124.7°
SAWNAVCAIHAI52.5°5.1°
SAWNAVCAIHAIA67.2°115.3°
OBDSAWNAVCAI71.3°156.2°
OBDSAWNAVCAU161.1°23.6°
OAJSAWNAVCAI172.0°23.3°
OAJSAWNAVCAU44.4°156.5°
CAINAVCAUCAT59.8°55.0°
CAINAVCAUHAU60.2°64.8°
CAINAVCAUHAUA179.5°174.9°
NAVCAICAHHAI120.0°119.7°
NAVCAICAHHAIA120.3°119.9°
NAVCAIHAIHAIA120.3°120.4°
NAVCAICAHNAG60.3°49.6°
NAVCAICAHHAH59.7°70.2°
NAVCAICAHHAHA179.6°169.1°
NAVCAUCATHAU120.0°119.8°
NAVCAUCATHAUA119.8°119.8°
NAVCAUHAUHAUA119.8°120.3°
NAVCAUCATNAG61.1°49.5°
NAVCAUCATHAT178.9°169.2°
NAVCAUCATHATA59.7°70.4°
CAUNAVCAICAH58.6°55.1°
CAUNAVCAIHAI178.5°174.7°
CAUNAVCAIHAIA61.8°65.0°
CATCAUHAUHAUA119.8°120.5°
CAUCATNAGHAT120.0°119.8°
CAUCATNAGHATA120.8°119.8°
CAUCATHATHATA120.8°120.4°
CAUCATNAGCAH62.7°55.5°
CAUCATNAGSAF168.2°124.8°
HAUCAUCATNAG59.0°70.3°
HAUCAUCATHAT61.1°49.4°
HAUCAUCATHATA179.7°169.7°
HAUACAUCATNAG179.2°169.3°
HAUACAUCATHAT59.2°71.0°
HAUACAUCATHATA60.1°49.4°
NAGCATHATHATA120.8°120.5°
CATNAGCAHCAI63.3°55.5°
CATNAGCAHSAF129.9°179.7°
CATNAGCAHHAH56.7°64.3°
CATNAGCAHHAHA176.6°175.2°
CATNAGSAFOAB173.3°156.2°
CATNAGSAFOAS67.4°23.3°
CATNAGSAFCAE52.8°90.2°
HATCATNAGCAH177.3°175.3°
HATCATNAGSAF48.2°5.0°
HATACATNAGCAH58.1°64.3°
HATACATNAGSAF71.0°115.4°
CAHCAIHAIHAIA120.3°120.5°
CAICAHNAGHAH120.0°119.8°
CAICAHNAGHAHA120.1°119.6°
CAICAHHAHHAHA120.1°120.5°
CAICAHNAGSAF166.8°124.7°
HAICAICAHNAG179.7°169.3°
HAICAICAHHAH60.3°49.5°
HAICAICAHHAHA59.6°71.2°
HAIACAICAHNAG60.0°70.3°
HAIACAICAHHAH179.9°169.8°
HAIACAICAHHAHA60.1°49.2°
NAGCAHHAHHAHA120.1°120.3°
CAHNAGSAFOAB46.4°23.5°
CAHNAGSAFOAS165.7°156.4°
CAHNAGSAFCAE74.1°90.0°
HAHCAHNAGSAF73.2°115.4°
HAHACAHNAGSAF46.7°5.1°
NAGSAFOABOAS117.7°122.9°
NAGSAFOABCAE125.8°114.1°
NAGSAFOASCAE125.4°114.1°
NAGSAFCAECAD93.4°89.8°
NAGSAFCAECAR88.8°90.0°
OABSAFOASCAE116.1°123.0°
OABSAFCAECAD28.1°23.8°
OABSAFCAECAR149.7°156.4°
OASSAFCAECAD146.3°156.7°
OASSAFCAECAR31.5°23.5°
SAFCAECADCAR177.8°179.8°
SAFCAECADFAA1.8°0.1°
SAFCAECADCAC179.3°180.0°
SAFCAECARCAQ179.5°179.7°
SAFCAECARFBC1.6°0.0°
CAECADFAACAC178.9°179.9°
CAECADCACCAP0.9°0.1°
CAECADCACHAC179.2°180.0°
CADCAECARCAQ1.7°0.5°
CADCAECARFBC179.4°179.7°
CARCAECADFAA179.6°179.7°
CARCAECADCAC1.5°0.2°
CAECARCAQCAP1.2°0.5°
CAECARCAQFBC178.9°179.8°
CAECARCAQHAQ178.8°179.7°
FAACADCACCAP179.8°180.0°
FAACADCACHAC0.3°0.2°
CADCACCAPHAC180.0°179.9°
CADCACCAPCAQ0.4°0.1°
CADCACCAPHAP179.6°179.9°
CACCAPCAQHAP180.0°180.0°
CACCAPCAQCAR0.5°0.2°
CACCAPCAQHAQ179.4°180.0°
HACCACCAPCAQ179.6°179.9°
HACCACCAPHAP0.4°0.0°
CAPCAQCARHAQ180.0°179.8°
CAPCAQCARFBC179.9°179.7°
HAPCAPCAQCAR179.5°179.8°
HAPCAPCAQHAQ0.6°0.0°
HAQCAQCARFBC0.1°0.1°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon